| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,945,208 | T→C | Y212C (TAC→TGC) | tcdA ← | tRNA threonylcarbamoyladenosine dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,945,208 | 0 | T | C | 98.8% | 308.2 / NA | 85 | Y212C (TAC→TGC) | tcdA | tRNA threonylcarbamoyladenosine dehydratase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (47/37); minor base G (1/0); total (48/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCATGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGTACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGCCAGATCGG > NC_000913/2945074‑2945343 | gcgcATGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTCCATCGCACACAGCGAACCGTCTGACTGCGGGCACAcc > 1:840892/1‑140 (MQ=255) cgcATGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCa > 2:969357/1‑140 (MQ=255) cgcATGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCa > 2:1183537/1‑140 (MQ=255) cgcATGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTACCGTGGCTTTCAACGCACACACCGTCCCGTCTGACTGCGGGCACACCa > 2:640035/1‑140 (MQ=255) gcATGAGAAACCGCAACAAACCTAAAGGTGGAGGTCACCATCGTTGCCACGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAg < 2:592674/140‑1 (MQ=255) cATGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTTATCTCACACACCGTACGGTCTAACTGCGGGCACACCAgc > 2:704106/1‑140 (MQ=255) aTGAGAAATCGCAACACCCCCACAGGTGGCACTTATCATCGTTGCCGCCCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAgcg < 2:909865/140‑1 (MQ=255) aTGAGAAACCGCAACTAACCCATAGTTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAgcg < 1:704106/140‑1 (MQ=255) aTGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAgcg < 2:1599795/140‑1 (MQ=255) tGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAgcgc < 2:1424743/140‑1 (MQ=255) tGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAgcgc < 1:1636486/140‑1 (MQ=255) gagaAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCTGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCt > 2:360838/1‑140 (MQ=255) agaAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCtt < 2:1326360/140‑1 (MQ=255) agaAACCGCAACAAACCAAAAGATGGCGGTCGCTAACGTCGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCtt < 2:897369/140‑1 (MQ=255) cGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAg > 2:313724/1‑140 (MQ=255) cGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAg > 2:53838/1‑140 (MQ=255) caacaaACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGGACCGTCTTACTACGGGCACACAAGCGCTTCAGTAGaa > 1:909865/1‑140 (MQ=255) aacaaACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGaaa < 2:1176125/140‑1 (MQ=255) caaACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCGCACACCGTTCCGTCTGACTGCGGGCACACCGGCGCTTCAGTAGAAAac > 2:599553/1‑140 (MQ=255) caaACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACAGTCTGACCGCGGGCTCACCAGTGCTACAGTAGAAAac > 1:556289/1‑140 (MQ=255) aaaCCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAaca < 1:319854/140‑1 (MQ=255) aCCCAAAGGTGGCGGTCTCCATCGTTGCCGCCCCACATCTAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTACAGTAGAAAACACg < 2:556289/140‑1 (MQ=255) aCCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACg < 2:1669514/140‑1 (MQ=255) aaGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATc < 1:313724/140‑1 (MQ=255) aaGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATc < 1:53838/140‑1 (MQ=255) aaGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGAACCGTCTGCCTGTGGGGACACCAGCTCTTCTGTAGAAAACACGCAATc > 2:641963/1‑140 (MQ=255) tGGCGGTCACCATCGTTGCCGCCCCCAATGCAGATGCGCAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACg < 1:640035/140‑1 (MQ=255) gCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACg > 2:1291700/1‑129 (MQ=255) gCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACg < 1:1291700/129‑1 (MQ=255) cGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCg > 1:40393/1‑140 (MQ=255) cGGTCACCATCGTTGCCGCGCCAAATCCAGATCCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCg > 2:1129941/1‑140 (MQ=255) aCCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCtt > 1:449766/1‑140 (MQ=255) tCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCt > 1:23018/1‑140 (MQ=255) cGTTGCCGCGCCAAATTCAGATGCACAATCAATACCCTTCGGCCCTTCAGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCtt < 2:907468/140‑1 (MQ=255) ttGCCGCGCCAAATCCAGATGCTCAATCCATTCGCATCGTCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTa < 2:546897/140‑1 (MQ=255) ttGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTa < 2:1358890/140‑1 (MQ=255) ttGCCGCGCCAAATCCAGATCCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTa < 1:1129941/140‑1 (MQ=255) aaTCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCAc < 1:1183537/140‑1 (MQ=255) aaTCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCAc < 2:449766/140‑1 (MQ=255) tCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTCCCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTa < 2:155760/140‑1 (MQ=255) acaATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAAt > 1:20350/1‑140 (MQ=255) atccatccGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGc > 1:386715/1‑140 (MQ=255) tccGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTc > 2:341679/1‑140 (MQ=255) ccGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCa > 1:1810304/1‑140 (MQ=255) ccGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCa > 2:1895561/1‑140 (MQ=255) tCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGgcgc > 2:1384418/1‑140 (MQ=255) tCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGgcgc > 1:1680878/1‑140 (MQ=255) tCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGgcgc > 2:1040723/1‑140 (MQ=255) gCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGgcgc > 1:964438/1‑137 (MQ=255) gCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGgcgc < 2:964438/137‑1 (MQ=255) gCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAAc < 2:1230522/132‑1 (MQ=255) gCTTTCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAAc > 1:1230522/1‑132 (MQ=255) tttCATCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCa > 2:50355/1‑140 (MQ=255) acagcGCAGACACCGTGGCGTCGGACTGCGGGCGCGCCAGCGCTTCAGGAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGc < 2:842697/136‑1 (MQ=255) acagcGCACACACCGTACCGTCTGAATGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGc < 1:820681/136‑1 (MQ=255) aTCGCACACACCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCgg < 1:360838/140‑1 (MQ=255) cacacaCCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTcc > 2:5229/1‑140 (MQ=255) cacCTTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGTGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGaa < 2:1822752/140‑1 (MQ=255) cacCGTACCGTCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGaa < 1:1895561/140‑1 (MQ=255) ccgtaccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATc > 1:1822679/1‑140 (MQ=255) gtaccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGc < 1:470116/126‑1 (MQ=255) gtaccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGc > 2:470116/1‑126 (MQ=255) gtaccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGt > 2:1154859/1‑140 (MQ=255) gtaccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGt > 2:1353252/1‑140 (MQ=255) taccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGtt < 2:23018/140‑1 (MQ=255) taccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGtt > 1:1459718/1‑140 (MQ=255) taccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGtt < 1:1897787/140‑1 (MQ=255) taccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCCCTCGCGCCACTCCGCCGCCAGCGGGTCCTGAATctgt > 1:842697/1‑137 (MQ=255) taccgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGCCGCCCGCGCAACTTCGCCGCCGGCGGGTCCTGAATctgt > 2:820681/1‑137 (MQ=255) accgtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGATCGCGCAGCTTAGCAGCCAGCAGGTCCTGAATCGttt > 1:779424/1‑140 (MQ=255) gtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCg > 1:1213322/1‑140 (MQ=255) gtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCg < 1:50355/140‑1 (MQ=255) gtCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCCCGCAACTCCGCCGCGAGCGGGGCCTGAATCGTTTTCg > 1:842376/1‑140 (MQ=255) tCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAATACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGc < 2:717546/140‑1 (MQ=255) tCTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGc > 1:717546/1‑140 (MQ=255) cTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGcc > 1:191656/1‑140 (MQ=255) cTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGCTTTCGcc > 1:1457759/1‑140 (MQ=255) cTGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCACGCCACTTCGCCGCCACCGGGACCTGAATCGTTTTCGcc > 2:662466/1‑140 (MQ=255) tGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGCCa < 2:386715/140‑1 (MQ=255) tGACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGCCa < 1:106924/140‑1 (MQ=255) gACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGCCAg > 2:1118217/1‑140 (MQ=255) gACTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGCCAg > 2:450396/1‑140 (MQ=255) aCTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGCCAGa > 1:129636/1‑140 (MQ=255) cTGCGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGCCAGAt > 1:1127953/1‑140 (MQ=255) cGGGCACGCCAGCGCTTCAGTAGAAAACACGCAATCCACGCCCGGCATACCTTTACTGTTTTTCACTACGCCAAAATCGCTTATCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGGCCTGAATCGTTTTCCCCAGATCgg < 2:1903831/140‑1 (MQ=255) cGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGaa < 1:1492052/122‑1 (MQ=255) cGGGCACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGaa > 2:1492052/1‑122 (MQ=255) | GCGCATGAGAAACCGCAACAAACCCAAAGGTGGCGGTCACCATCGTTGCCGCGCCAAATCCAGATGCACAATCCATCCGCTTCGGCCCTTCTGCCGTGGCTTTCATCGCACACACCGTACCGTCTGACTGCGGGTACACCAGCGCTTCAGTAGAAAACACGCAATCCACGCCGAGCTTACCTTTACTGTTTTTCACTACGCCAAAATCGCTTTTCAGGCGCTCGCGCAACTTCGCCGCCAGCGGGTCCTGAATCGTTTTCGCCAGATCGG > NC_000913/2945074‑2945343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |