BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	346,213	A→G	V42A (GTA→GCA)	yahN ←	putative amino acid exporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	346,213	0	A	G	100.0%	437.3 / NA	119	V42A (GTA→GCA)	yahN	putative amino acid exporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/64); total (55/64)

Only 100 of 126 total aligned reads displayed.

CGAAAAAATCTCCTCACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTACTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGAACTAACTGCATCATATTTCTACC  >  NC_000913/346077‑346346

cGAAAAAATCTCCTCACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGtgcta                                                                                                                                    >  2:1723970/1‑140 (MQ=255)

cGAAAAAATCTCCTCACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGtgct                                                                                                                                     >  1:1440622/1‑139 (MQ=255)

     aaaTCTCCTCACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACcaca                                                                                                                               >  1:1013576/1‑140 (MQ=255)

     aaaTCTCCTCACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACcaca                                                                                                                               <  2:1013576/140‑1 (MQ=255)

     aaaTCTCCTCACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACcaca                                                                                                                               <  2:1458225/140‑1 (MQ=255)

          tcctcACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAagag                                                                                                                          >  2:155228/1‑140 (MQ=255)

          tcctcACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAagag                                                                                                                          >  1:478613/1‑140 (MQ=255)

             tcACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGAtt                                                                                                                       <  2:478613/140‑1 (MQ=255)

              cacaCTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTg                                                                                                                      >  2:247692/1‑140 (MQ=255)

                  cTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTc                                                                                                                  <  1:81418/140‑1 (MQ=255)

                    gCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGATTTATGCTACCACTAAGAGATTGGCTccc                                                                                                                >  1:893485/1‑140 (MQ=255)

                     cGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCg                                                                                                               >  2:1578551/1‑140 (MQ=255)

                     cGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCg                                                                                                               >  2:1135219/1‑140 (MQ=255)

                     cGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCg                                                                                                               >  2:10545/1‑140 (MQ=255)

                     cGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCg                                                                                                               >  1:346522/1‑140 (MQ=255)

                     cGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCg                                                                                                               >  1:1766598/1‑140 (MQ=255)

                     cGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGGGCTACAACAAAGAGATTGGCTCCCg                                                                                                               >  1:1053510/1‑140 (MQ=255)

                     cGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGGTTGTGCAACCACAAAGAGATTGGCTCCCg                                                                                                               >  1:686653/1‑140 (MQ=255)

                     cGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGATTGCGCCACCACAAAGAGATTGGCTCCCg                                                                                                               >  1:659613/1‑140 (MQ=255)

                      gTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCgg                                                                                                              >  2:1716630/1‑140 (MQ=255)

                             gCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCGTCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTaaaa                                                                                                       >  2:1195781/1‑140 (MQ=255)

                               gTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTaaaaaa                                                                                                     >  2:1019525/1‑140 (MQ=255)

                               gTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTGGTGCTACCACAAAGCGATTGGCTCCCGGATTaaaaaa                                                                                                     >  1:847193/1‑140 (MQ=255)

                                 tGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAg                                                                                                   <  1:1716630/140‑1 (MQ=255)

                                 tGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAg                                                                                                   <  1:1195781/140‑1 (MQ=255)

                                  gCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGa                                                                                                             >  1:1095768/1‑129 (MQ=255)

                                  gCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGa                                                                                                             <  2:1095768/129‑1 (MQ=255)

                                         caaacaaaCCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACg                                                                                           <  1:163349/140‑1 (MQ=255)

                                         caaacaaaCCCAACCCGCAATACAATGCATCGCCCCGCGGCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACg                                                                                           <  2:659613/140‑1 (MQ=255)

                                           aacaaacCGAACCCGGAATAAAGTGCATCGAACTGAGCCACGCCCAGCACGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         <  2:893485/140‑1 (MQ=255)

                                           aacaaacCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         >  2:1000219/1‑140 (MQ=255)

                                           aacaaacCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         <  2:216965/140‑1 (MQ=255)

                                           aacaaacCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         >  2:1209078/1‑140 (MQ=255)

                                           aacaaacCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         >  1:1908384/1‑140 (MQ=255)

                                           aacaaacCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         >  1:1477585/1‑140 (MQ=255)

                                           aacaaacCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         <  1:1754028/140‑1 (MQ=255)

                                           aacaaacCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         <  1:1791140/140‑1 (MQ=255)

                                           aacaaacCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGaa                                                                                         >  1:1647605/1‑140 (MQ=255)

                                                acccaacccGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTc                                                                                    >  1:1508178/1‑140 (MQ=255)

                                                 cccaacccGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTcc                                                                                   >  2:1718385/1‑140 (MQ=255)

                                                      cccGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACgg                                                                              >  2:357721/1‑140 (MQ=255)

                                                      cccGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACgg                                                                              >  2:407166/1‑140 (MQ=255)

                                                       ccGGAATAAAATGCATCGCCCATCGCCACGCCCAGCCAGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGt                                                                             <  1:625694/140‑1 (MQ=255)

                                                       ccGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGt                                                                             <  2:438961/140‑1 (MQ=255)

                                                       ccGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGt                                                                             <  1:1538535/140‑1 (MQ=255)

                                                       ccGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGt                                                                             <  1:1288407/140‑1 (MQ=255)

                                                       ccGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGt                                                                             <  1:954913/140‑1 (MQ=255)

                                                       ccGGAATAAAATGCATCACCCAGCGCCACGCCCAGCCCGCTCAGCACCGCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGt                                                                             <  2:863317/140‑1 (MQ=255)

                                                          gAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGACCAGTCCTACGGTCAg                                                                          >  1:863317/1‑140 (MQ=255)

                                                          gAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAg                                                                          >  1:1403450/1‑140 (MQ=255)

                                                           aaTAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCGGGAGTAACAAAAGTAAGCACGAACAGTCCTACGGTCAgg                                                                         >  2:625694/1‑140 (MQ=255)

                                                           aaTAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTc                                                                            <  2:54170/137‑1 (MQ=255)

                                                           aaTAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTc                                                                            >  1:54170/1‑137 (MQ=255)

                                                           aaTAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAgg                                                                         >  2:1171242/1‑140 (MQ=255)

                                                           aaTAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAgg                                                                         >  1:1203178/1‑140 (MQ=255)

                                                                 aTGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACg                                                                   <  1:1019525/140‑1 (MQ=255)

                                                                   gCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGc                                                                 <  1:1718385/140‑1 (MQ=255)

                                                                    cATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCa                                                                <  2:1508178/140‑1 (MQ=255)

                                                                     aTCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAAcctgtc                                                               >  1:1328801/1‑135 (MQ=255)

                                                                     aTCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCAt                                                               >  2:1719178/1‑140 (MQ=255)

                                                                     aTCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCAt                                                               >  1:333656/1‑140 (MQ=255)

                                                                     aTCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATAACGAACAGCCCTACAGTCAGGTAAACGGCAt                                                               >  2:817517/1‑140 (MQ=255)

                                                                       cGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGc                                                             <  1:975499/140‑1 (MQ=255)

                                                                       cGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGc                                                             <  2:1403450/140‑1 (MQ=255)

                                                                         cccAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCaa                                                           <  1:1000219/140‑1 (MQ=255)

                                                                         cccAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCaa                                                           <  2:1372572/140‑1 (MQ=255)

                                                                         cccAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCaa                                                           <  2:1908384/140‑1 (MQ=255)

                                                                           cAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAg                                                         <  1:357721/140‑1 (MQ=255)

                                                                           cAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAg                                                         <  1:475487/140‑1 (MQ=255)

                                                                           cAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAg                                                         <  2:1206449/140‑1 (MQ=255)

                                                                              cgcCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGAt                                                      <  1:1578551/140‑1 (MQ=255)

                                                                              cgcCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGAt                                                      <  1:407166/140‑1 (MQ=255)

                                                                                   cGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTCATCACGAACAGTACTAGGGTCAGGTGAACGACATGCAAAGGATCCATa                                                 >  2:571550/1‑140 (MQ=255)

                                                                                   cGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCaaa                                                          <  2:1284372/131‑1 (MQ=255)

                                                                                   cGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCaaa                                                          >  1:1284372/1‑131 (MQ=255)

                                                                                        aGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCaa                                                           >  2:1171325/1‑125 (MQ=255)

                                                                                        aGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCaa                                                           <  1:1171325/125‑1 (MQ=255)

                                                                                        aGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGAt                                            >  1:141918/1‑140 (MQ=255)

                                                                                              gTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCAt                                       >  1:482423/1‑139 (MQ=255)

                                                                                                cAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCa                                    >  1:1252718/1‑140 (MQ=255)

                                                                                                    aCCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCataaa                                <  1:144202/140‑1 (MQ=255)

                                                                                                      cccTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCataaata                              <  1:1719178/140‑1 (MQ=255)

                                                                                                         tGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGt                           >  1:1866851/1‑140 (MQ=255)

                                                                                                         tGCGCGTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGt                           >  1:1178001/1‑140 (MQ=255)

                                                                                                           cgcgTCGACCGGAAGTCAGGCTTGTTTGTGCTACCACTAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGa                         <  1:571550/140‑1 (MQ=255)

                                                                                                           cgcgTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCataaa                                <  1:1148216/133‑1 (MQ=255)

                                                                                                             cgTCGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaac                       >  1:192930/1‑140 (MQ=255)

                                                                                                                cGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaactaa                    <  1:155228/140‑1 (MQ=255)

                                                                                                                cGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaa                        <  1:1146735/136‑1 (MQ=255)

                                                                                                                cGACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaa                        >  2:1146735/1‑136 (MQ=255)

                                                                                                                 gACCGGAAGCCAGGCTGGTTTGTGCTACCCCAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaactaac                   <  1:817517/140‑1 (MQ=255)

                                                                                                                 gACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGTTTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaactaac                   <  1:569898/140‑1 (MQ=255)

                                                                                                                 gACCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaactaac                   <  1:1135219/140‑1 (MQ=255)

                                                                                                                  aCCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaactaact                  <  1:1684580/140‑1 (MQ=255)

                                                                                                                  aCCGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGaactaact                  >  2:1312450/1‑140 (MQ=255)

                                                                                                                   ccGGAAGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGAACTAACTg                 <  2:1165701/140‑1 (MQ=255)

                                                                                                                       aaGCCAGGCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGAACTAACTGcatc             <  1:17963/140‑1 (MQ=255)

                                                                                                                             ggCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGAACTAACTGCATCATAttt       >  2:1574185/1‑140 (MQ=255)

                                                                                                                              gCTGGTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGAACTAACTGCATCATATTTc      >  2:1865422/1‑140 (MQ=255)

                                                                                                                                  gTTTGTGCTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGAACTAACTGCATCATATTTCTAcc  <  1:1865422/140‑1 (MQ=255)

CGAAAAAATCTCCTCACACTGCGTAATTAGCGTTGCAAGACCAAACAAACCCAACCCGGAATAAAATGCATCGCCCAGCGCCACGCCCAGCCCGGTCAGCACCCCTGCGCGTCGACCGGAAGCCAGGCTGGTTTGTACTACCACAAAGAGATTGGCTCCCGGATTAAAAAAAGTAATCACGAACAGTCCTACGGTCAGGTAAACGGCATGCAAAGGATCCATAGTGATTTCATCCATAAATAAGTGAACTAACTGCATCATATTTCTACC  >  NC_000913/346077‑346346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`