| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,247,457 | G→A | intergenic (+29/‑316) | exuR → / → yqjA | DNA‑binding transcriptional repressor ExuR/DedA family protein YqjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,247,457 | 0 | G | A | 99.2% | 442.8 / NA | 133 | intergenic (+29/‑316) | exuR/yqjA | DNA‑binding transcriptional repressor ExuR/DedA family protein YqjA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (60/72); minor base C (0/1); total (60/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 136 total aligned reads displayed.
TGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGT > NC_000913/3247322‑3247591 | tGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACGAGCGGCAGTAAAGGAAATTCCTGTCTGACAGGCGCTGCAATGCACCTg > 2:535623/1‑140 (MQ=255)tGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAGATGAAATGCCTGTCAGACAGGGGCTGCAATGCACCTg > 1:523460/1‑140 (MQ=255)tGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTACATGAAATACCTCTCGGACAGGAGCTGCAATGCACCTg > 1:507222/1‑140 (MQ=255) ttATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGtt > 1:1651554/1‑140 (MQ=255) ttATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGtt < 2:416246/140‑1 (MQ=255) ttATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAAGGAAATTCCTGTCCGCCAGGCGCTGCAATGCACCTGtt > 1:852541/1‑140 (MQ=255) aTTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTg < 2:1024390/140‑1 (MQ=255) ttAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGtc > 1:1316439/1‑140 (MQ=255) aCGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCtcg > 1:981642/1‑140 (MQ=255) cGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCTTGTCCGAAAGGCGCTGCAATGTACCTGTTTGTCtcgt > 1:823456/1‑140 (MQ=255) cGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCtcgt > 2:1776019/1‑140 (MQ=255) cGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCtcgt > 1:1147372/1‑140 (MQ=255) cGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCtcgc > 2:1253493/1‑139 (MQ=255) aCCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGTGCTACAGTGCACCAGTTTGTCTCGTCGGt > 1:866610/1‑140 (MQ=255) aCCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGt < 2:981642/140‑1 (MQ=255) aCCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGt > 1:1697240/1‑140 (MQ=255) aCCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGt > 1:340016/1‑140 (MQ=255) aCCAGCGAAGACTTCGGGTTCAATGCCGACCGCTATCTAGTCGCCGAACACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGt < 2:912594/140‑1 (MQ=255) ccAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGGAATTCCTGTCCGGCAGGCGCTGCAAGGCACCTGTTTGTCTCGTCGGTa > 2:737850/1‑140 (MQ=255) ccAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCtcg > 2:122111/1‑134 (MQ=255) ccAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCtcg < 1:122111/134‑1 (MQ=255) ccAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGACAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTa > 2:178795/1‑140 (MQ=255) cgacgaCTTCGAGTTCGATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCg > 1:1565790/1‑140 (MQ=255) cgacgaCTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCg < 2:1581087/140‑1 (MQ=255) acgacTTCGAGTTCAATGCCGAGCGCTATCTTTTCGCCGTAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGaa < 2:814488/140‑1 (MQ=255) acTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAg > 1:1081011/1‑140 (MQ=255) cGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCCCCTGTTTGTCTCGTCGGTAAGCGAAAAGtata < 2:1301410/140‑1 (MQ=255) cGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGtata < 1:1424078/140‑1 (MQ=255) aTGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGaa > 1:1841239/1‑125 (MQ=255) aTGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGaa < 2:1841239/125‑1 (MQ=255) tGCCGACCGCTATCTATTCGCCGAAAACCCGTTGGTGCATCTCGATACGGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAg < 2:631640/140‑1 (MQ=255) gCCGACCGCTATCTATTGGCCGAAAACCCGGTGTTGCATGTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGc < 2:816670/140‑1 (MQ=255) gCCGACCGCTATCTATTCGCCGAAAACCCGGTGTTACATCTCGATACACCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGc < 2:823456/140‑1 (MQ=255) gCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGc < 2:1651554/140‑1 (MQ=255) gCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGACAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGc < 1:178795/140‑1 (MQ=255) gCCGACCGCTATCTATTAGCCGAAAACCCGGGGGTCCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGc < 2:755833/140‑1 (MQ=255) aCCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGta < 2:1770925/124‑1 (MQ=255) aCCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGta > 1:1770925/1‑124 (MQ=255) aCCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCtgt > 1:663752/1‑140 (MQ=255) tatctatTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGTAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTaaa > 1:1518303/1‑140 (MQ=255) tctatTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATc > 1:131964/1‑140 (MQ=255) ttCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCctct < 1:1250527/140‑1 (MQ=255) tCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTGTCGTCGGTGAGCCAAAAGTATAAAGAGTCAGGCTGTGTACATCCtctc > 2:916782/1‑140 (MQ=255) tCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCtctc > 1:401070/1‑140 (MQ=255) gCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGc > 2:1917252/1‑140 (MQ=255) gCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTAGTCGGTAAGCGAGAAGGATAAAGTGGCAGCGTGTGTAAATCCTCTCGc > 2:521369/1‑140 (MQ=255) ccGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGcc > 2:1620785/1‑140 (MQ=255) ccGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGAGAATAGTCTAAAGTGTCAGCCAGTGTAAATCCTCTCGcc > 2:693434/1‑140 (MQ=255) gAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAACAGTATAATGTGACATCCTGTGTAAATCCTCTCGCCAc > 1:616199/1‑140 (MQ=255) gAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCAc > 1:404154/1‑140 (MQ=255) aaaaCCCGGTGGTGCGTCTCGAAACAGCCTCCAGCGGTAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCAcc < 1:737850/140‑1 (MQ=255) aaaaCCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCAcc < 2:377031/140‑1 (MQ=255) aaaaCCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCAcc < 1:1320701/140‑1 (MQ=255) aaaaCCCGGTGGTGCATCTCGACACGGCCCCCAGCGGTAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCAcc < 1:916782/140‑1 (MQ=255) cGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTcccc > 2:1528509/1‑140 (MQ=255) ggtggtGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCt > 1:389605/1‑140 (MQ=255) ggtgCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCa > 2:958061/1‑140 (MQ=255) gtgCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCAt < 2:1565790/140‑1 (MQ=255) aTCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAg < 2:689012/140‑1 (MQ=255) ctcGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCa < 2:1255877/140‑1 (MQ=255) ctcGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCa < 1:1620785/140‑1 (MQ=255) cGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCaaa > 2:146594/1‑140 (MQ=255) tACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATc > 2:1431934/1‑140 (MQ=255) tACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATc > 1:1569695/1‑140 (MQ=255) aCAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCa < 1:1431934/140‑1 (MQ=255) aCAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCa < 1:98801/140‑1 (MQ=255) cAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAg < 1:1776019/140‑1 (MQ=255) aGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGa < 2:226271/140‑1 (MQ=255) aGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGa < 2:1236106/140‑1 (MQ=255) aGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGa < 1:1680739/140‑1 (MQ=255) aGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGa < 1:249484/140‑1 (MQ=255) ccaccaGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACt > 1:1099228/1‑140 (MQ=255) caGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCAc > 1:933515/1‑140 (MQ=255) aGCGGCAGTAAATGACATTCCTATCCGACTGGCGCTGGAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACg < 1:521369/140‑1 (MQ=255) aGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACg < 2:1099228/140‑1 (MQ=255) gCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACgg < 2:157928/140‑1 (MQ=255) cGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCTCTGGATTCAGCAAAATCAGACTCCACGGa > 1:907178/1‑140 (MQ=255) ggCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGAc < 2:1404160/140‑1 (MQ=255) tGAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAAttt < 1:1917252/140‑1 (MQ=255) gAAATTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCAGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAAtttt > 2:1481331/1‑140 (MQ=255) aaaTTCCTGTCCGACAGGCGCTTCAATGCACCTGTCTGTCTCGTCGGTTAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTg < 2:697067/140‑1 (MQ=255) aaaTTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTg < 1:399509/140‑1 (MQ=255) aaTTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGa > 2:138553/1‑140 (MQ=255) aaTTCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGa < 2:1155355/140‑1 (MQ=255) aTTCCTGTCCGACAGGCGCTGCTATGCACCTTTTTTTCTTGTCGGTAAACGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGAt < 2:907178/140‑1 (MQ=255) tCCTGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATaa > 1:1447045/1‑140 (MQ=255) tGTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGa > 2:144945/1‑140 (MQ=255) gTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGaa < 1:1332718/140‑1 (MQ=255) gTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGaa < 2:396725/140‑1 (MQ=255) gTCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCAGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGaa < 1:1481331/140‑1 (MQ=255) gTCCGACAGGCGCTGCAATGCACCTGTTTCTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGaa < 1:656511/140‑1 (MQ=255) tCCGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCACAATCAGACTCCGCGTACATGTGATTTTGATAACGaac > 1:697067/1‑140 (MQ=255) ccGACAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGaaca < 2:163277/140‑1 (MQ=255) cAGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGt > 2:1082746/1‑140 (MQ=255) aGGTGCTGCAATGCACCTATTTGTATCATCGGTAAGCGAAAAGTATAAAGTGACGGCCTGTATAAATCCTCTCGCCACCCGCCCCTGCATACAGCGAAATCAGACTCCACGGACATGTAATTTTGACAACGAACAACGtt < 2:436224/140‑1 (MQ=255) aGGCGCTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGtt < 2:1876649/140‑1 (MQ=255) cgcTGCAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGAc < 2:401070/140‑1 (MQ=255) cTGTAATGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCt < 2:1518303/140‑1 (MQ=255) aaTGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGt > 2:332522/1‑140 (MQ=255) aaTGCACCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGt < 2:1697240/140‑1 (MQ=255) | TGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGT > NC_000913/3247322‑3247591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |