| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,590,504 | C→T | L136L (CTG→CTA) | ugpA ← | sn‑glycerol 3‑phosphate ABC transporter membrane subunit UgpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,590,504 | 0 | C | T | 99.1% | 381.7 / NA | 111 | L136L (CTG→CTA) | ugpA | sn‑glycerol 3‑phosphate ABC transporter membrane subunit UgpA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (55/55); minor base G (0/1); total (55/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TGCAGCGCGGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCA > NC_000913/3590367‑3590633 | tGCAGCGCGGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAg > 1:276097/1‑140 (MQ=255)tGCAGCGCGGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAg > 1:1450474/1‑140 (MQ=255)tGCAGCGCGGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTACCCGGACTCCGCGAGAAAATGGGTGATTAg > 1:826591/1‑140 (MQ=255) cAGCGCGGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGcc < 1:353217/140‑1 (MQ=255) cAGCGCGGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGcc > 1:113275/1‑140 (MQ=255) aGCGCGGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGACAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGccc > 1:1887294/1‑140 (MQ=255) cgcgGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCcgc > 2:25379/1‑140 (MQ=255) cgGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCATAGGCGAGCTCCGCGAGAAAAGGGGTGATTAGCCCGCGa > 2:486073/1‑140 (MQ=255) ggCATAGAAGAACAGGAGGTTGTAGCTGATTTGCTTCCACACTGAGGCTAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGAc < 2:765403/140‑1 (MQ=255) ggCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGGTCCAGTCGTAGCTGAAGTCCGCGAGGAAATGGGTGATTAGCCCGCGAc > 2:761469/1‑140 (MQ=255) ggCATAGAAGAACAGCAAGTTGTAGCTGATTTGCTTCAATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGAc < 1:570701/140‑1 (MQ=255) cATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCg < 1:25379/140‑1 (MQ=255) cATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCg < 2:1450474/140‑1 (MQ=255) tAGAAGAACAGGAAGCTGTAGCTGACTTGTTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCggg < 1:593897/140‑1 (MQ=255) agaaCAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTa < 1:1137553/140‑1 (MQ=255) cAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGAc < 2:1792347/128‑1 (MQ=255) cAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGAc > 1:1792347/1‑128 (MQ=255) cAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACa > 1:935541/1‑140 (MQ=255) cAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACa > 1:210908/1‑140 (MQ=255) cAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACa > 1:1565383/1‑140 (MQ=255) cAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACa > 2:40558/1‑140 (MQ=255) ggAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAgg < 2:256002/140‑1 (MQ=255) gAAGTTGTAGCTGATTTGCTTCCATCCTGAGGCAAACCCCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGa < 1:761469/140‑1 (MQ=255) gAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGa < 1:1741038/140‑1 (MQ=255) gAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGa < 1:40558/140‑1 (MQ=255) gAAGTTGTAGCTGATTTGCTTCCATACTGAGACAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGa < 2:1887294/140‑1 (MQ=255) aGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAg > 2:1587098/1‑140 (MQ=255) aGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAg < 2:1379725/140‑1 (MQ=255) ttGTAGCTGATTTGCATCCATAATGTGGCTAACACCATCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGAt < 1:488083/140‑1 (MQ=255) tGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATc > 2:51139/1‑140 (MQ=255) tGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATc < 1:1078275/140‑1 (MQ=255) tGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATc < 1:1213631/140‑1 (MQ=255) tAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCca < 2:210908/140‑1 (MQ=255) gATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATa < 2:120360/140‑1 (MQ=255) tttGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATAcg > 1:1720010/1‑140 (MQ=255) ttGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATAcgg > 1:1488290/1‑140 (MQ=255) cTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCGCGCAACCGGGGTTAAACAGGAGGATCCACAATAcggcgg > 2:757908/1‑140 (MQ=255) tCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCa > 2:1097924/1‑140 (MQ=255) aCTGAGGCAAACACCACAAGAAACATTGCCTCACCACTGTTTTGCGCGAGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAAcggc < 2:826591/140‑1 (MQ=255) gAGGCAAACACCACCAGAAACATTGGCTGTCCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCggg < 1:683327/140‑1 (MQ=255) gAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACggcggc < 2:1610003/131‑1 (MQ=255) gAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCggg > 2:119577/1‑140 (MQ=255) aGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCgggg > 2:237539/1‑139 (MQ=255) aGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCgggg > 1:29950/1‑139 (MQ=255) aGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGa > 1:1445097/1‑140 (MQ=255) gCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAGACAGGAAGATCTACAATACGGCGGCAACGGCGGGGGc > 1:842413/1‑140 (MQ=255) gCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCaa > 1:1040830/1‑130 (MQ=255) gCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCaa < 2:1040830/130‑1 (MQ=255) gCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGc > 1:1530531/1‑140 (MQ=255) gCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGc < 1:1783835/140‑1 (MQ=255) gCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGCAGc > 2:1277042/1‑140 (MQ=255) cAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGcc > 1:1627736/1‑140 (MQ=255) aaaCACCAGCAGAAACACTGCCCGACCGCTGGTTTCCGCTTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCa < 2:842413/140‑1 (MQ=255) aaCACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAACCAc > 1:1402469/1‑140 (MQ=255) aaCACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGCAGacac > 1:1671047/1‑140 (MQ=255) ccaccaGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCg < 2:1376722/140‑1 (MQ=255) ccaGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTaa < 2:1565383/140‑1 (MQ=255) aGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAgg < 1:1528783/140‑1 (MQ=255) aaCATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGgca‑g < 2:113275/140‑1 (MQ=255) aCATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGgca‑gc > 1:1327195/1‑140 (MQ=255) cATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGgca‑gc‑a < 2:332803/140‑1 (MQ=255) aTTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATGCGGCGGCAACGGCGCGAGCCCCCGCGTAAGGCA‑GC‑a‑a > 1:849454/1‑140 (MQ=255) gCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑At < 2:1327195/140‑1 (MQ=255) gCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑At > 1:1187254/1‑140 (MQ=255) gCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑At > 1:302048/1‑140 (MQ=255) gCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGAACCACAATAAGGCGGCAACGGCGGGGGGCCCGGCGGGAGGGA‑GC‑A‑AC‑aa > 2:780063/1‑139 (MQ=255) aCCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAgg > 1:247920/1‑140 (MQ=255) ccGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGt < 2:302048/140‑1 (MQ=255) cTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCCCCGCGGGAAGGA‑GC‑A‑ACAATAAAGGttt > 2:429042/1‑140 (MQ=255) cTGTTTTGCGCGTGGTTACAGTCGTAGCCGATCTCTGCGCGAAAATGGCTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATCaaacctta < 2:550521/140‑7 (MQ=255) gTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGGGGCCCCACGGAAGGCC‑CC‑A‑AA‑ACTAAGGTTTGaa > 1:1210582/1‑139 (MQ=255) ttttGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATa < 1:1456523/140‑1 (MQ=255) cgTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACCGCGTAAAGCA‑GC‑A‑AC‑ATTAAGGGTTGATAGAAAAgg > 1:344522/1‑140 (MQ=255) ggTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGGGGCCCCGCGGAAGGGA‑GCAA‑AA‑ATTAAGGTTT‑ATAGAAAAGGCTg > 2:1494921/1‑140 (MQ=255) ggTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTg < 2:1720010/140‑1 (MQ=255) ttCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGcc < 1:1494921/140‑1 (MQ=255) cAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCcgcg < 1:1097924/140‑1 (MQ=255) gagacaggCCGAACTCCGCGAGAAACTGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCgcgc < 1:672413/133‑1 (MQ=255) gTCGTAGCCGAACTCCGCGAGATAAGGGGTGATTAGCACGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCa < 1:830757/140‑1 (MQ=255) gTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCa < 2:1740542/140‑1 (MQ=255) gTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCa < 1:429042/140‑1 (MQ=255) gTCGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCa < 2:247920/140‑1 (MQ=255) cGTAGCCGAACTCCGTGAGAAACTGAGTGTTTAGCCCTCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACg < 1:875779/140‑1 (MQ=255) cGTAGCCGAACTCCGCGGGAAATTGGGTGATGAGCGCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACg < 2:849454/140‑1 (MQ=255) cGTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACg < 1:1242805/140‑1 (MQ=255) gTAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACGa < 2:1530531/140‑1 (MQ=255) gTAGCCGAACTCCGCGAGAAAATGGATGATTAGCCCGAGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACGa < 1:757908/140‑1 (MQ=255) caggCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACGa < 1:1809695/137‑1 (MQ=255) tAGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCCCGGCGGAAGGGG‑GC‑A‑AC‑ATTAAGGGTTTGTAGAAAAGGCCGCCCCGCCCGaa > 2:1648596/1‑139 (MQ=255) aGCCGAACTCCGCGAGAAAATGTGTGATTAGTCCGTGACTGGGGTTAATCAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATg < 2:487657/140‑1 (MQ=255) aGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGGGGCGCAGCGGCAGGCAGGA‑A‑AA‑ATTAAGGTTTG‑TTGAAACAGGGGGCGCGCACGCTg > 2:1295735/1‑140 (MQ=255) aGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGGGCCACGGCGGAAGGGA‑GC‑A‑AC‑AATAAAGGTTTATAAAAAAAGCCGCCGCGCACGaag > 2:418053/1‑138 (MQ=255) aGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGGGCCACGGCGGAAGGCA‑GC‑A‑AC‑AATAAAGGTTGATAGAAAAGGCGGCCCCCCCCGATg > 2:26386/1‑140 (MQ=255) aGCCGAACTCCGCGAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACCGCGTAAAGCC‑GC‑AGAA‑ATAAAGGTTAAACA‑AAACGCCGGCCGCGCACGaag > 1:609560/1‑138 (MQ=255) gcgAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAg < 1:6942/140‑1 (MQ=255) cgAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGGCACGGCGGAAAGGA‑GC‑A‑AA‑ATTAAAGGTTGAGAGAAAAGGCCGCCCCGCTCGCTGTACTcctgtctc > 2:672413/1‑134 (MQ=255) cgAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCCCGGCGGAAAGGA‑GC‑A‑AC‑AATAAGGGTTGATAGAAAAAGCCGCCGCGCACCAAGTACccccccccc > 2:1548393/1‑137 (MQ=255) cgAGAAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACCGCGGAAAGGA‑GC‑A‑AC‑AATAAAGGTTGATAAAAAAGGCTGCCCCGCCCGAAGTACTccaccccc > 2:1809695/1‑137 (MQ=255) agaAAATGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGGGCCACGGGGGAAGGGA‑GC‑A‑AC‑AATAAAGGTTGAAAGAAAAAGCCGCCCCGCCCGATGTACTCCACCAccgc > 2:6942/1‑140 (MQ=255) aaTGGGTGATTAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCa < 2:1445097/140‑1 (MQ=255) | TGCAGCGCGGCATAGAAGAACAGGAAGTTGTAGCTGATTTGCTTCCATACTGAGGCAAACACCACCAGAAACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA‑GC‑A‑AC‑ATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCACCAGCGCCGCA > NC_000913/3590367‑3590633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |