Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,795,971 C→T A348V (GCC→GTC)  waaF → ADP‑heptose‑‑LPS heptosyltransferase 2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,795,9710CT100.0% 398.6 / NA 119A348V (GCC→GTC) waaFADP‑heptose‑‑LPS heptosyltransferase 2
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (67/52);  total (67/52)

Only 100 of 121 total aligned reads displayed.

CGCGTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGCCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGCACA  >  NC_000913/3795835‑3796106
                                                                                                                                        |                                                                                                                                       
cgcgTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATTGACATTACTCCCCAGCGCGTACTGGAAGAACTGAACCCGATATTGTAACAAGAGGAAGTCTg                                                                                                                                      >  1:578729/1‑140 (MQ=255)
cgcgTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCGGCGCGTACAGGAAGAATTCAACGCGGTATTATTACAAGAGGAAGTCTg                                                                                                                                      >  2:687750/1‑140 (MQ=255)
cgcgTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTg                                                                                                                                      >  1:218759/1‑140 (MQ=255)
cgcgTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGAAAGAACTAAACGCGTTATTGTGACAAGAGGAAGTCTg                                                                                                                                      >  1:905828/1‑140 (MQ=255)
   gTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACg                                                                                                                                   <  2:391564/140‑1 (MQ=255)
      aTCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGAt                                                                                                                                <  2:218759/140‑1 (MQ=255)
       tCCGTTTGATTACCGCCTATCATAATGTGTGTAAAGGCGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATg                                                                                                                               <  1:493009/140‑1 (MQ=255)
        ccGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGc                                                                                                                              <  1:171495/140‑1 (MQ=255)
           tttGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATg                                                                                                                               <  2:1082170/136‑1 (MQ=255)
           tttGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATg                                                                                                                               >  1:1082170/1‑136 (MQ=255)
           tttGATTACCGGCTACCACAAATTGTGTAAAGGTGACCCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCggg                                                                                                                           <  1:687750/140‑1 (MQ=255)
                ttACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTg                                                                                                                      <  2:1234959/140‑1 (MQ=255)
                 tACCGGCTATCACAAAGTGCGTCAAGGTGACCCTGCGGAGGGTTATCATCAGAGCTTAATCGACATTACCCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGtttgat                                                                                                                     <  2:825472/140‑4 (MQ=255)
                 tACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTg                                                                                                                      >  1:1400875/1‑139 (MQ=255)
                 tACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTg                                                                                                                      <  2:1400875/139‑1 (MQ=255)
                     ggCTATCACAAAGTGCGCAAAGGTGACGCTGTGGACGGTTATCACCAGTGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGt                                                                                                                 <  2:578729/140‑1 (MQ=255)
                          tCACAAAGTGCGTAATGGTGACCCTACGGCGGGTTATTACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTaaaa                                                                                                            <  1:692144/140‑1 (MQ=255)
                          tCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTaaaa                                                                                                            >  2:284085/1‑140 (MQ=255)
                                  tGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAACACAtcgtcg                                                                                                    >  2:1507967/1‑140 (MQ=255)
                                  tGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACAtcgtcg                                                                                                    <  2:201556/140‑1 (MQ=255)
                                  tGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACAtcgtcg                                                                                                    <  2:135545/140‑1 (MQ=255)
                                    cGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGAt                                                                                                  >  1:347512/1‑140 (MQ=255)
                                    cGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGAt                                                                                                  >  2:315977/1‑140 (MQ=255)
                                    cGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGAt                                                                                                  >  1:1722383/1‑140 (MQ=255)
                                    cGTAAAGGTGACGCTGCGGAGGCTTTTCAGCAGAGCTCAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGAt                                                                                                  <  1:560479/140‑1 (MQ=255)
                                     gTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACAtcgtc                                                                                                     <  2:5129/136‑1 (MQ=255)
                                      tAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATgg                                                                                                <  1:315977/140‑1 (MQ=255)
                                       aaaGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATggg                                                                                               <  1:1507967/140‑1 (MQ=255)
                                             gACGCTGCGGAGGGTTATCACCCGAGCTTAACCGATATTCCTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGt                                                                                         <  2:579691/140‑1 (MQ=255)
                                             gACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGt                                                                                         <  2:474154/140‑1 (MQ=255)
                                              aCGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGtt                                                                                        <  1:1223114/140‑1 (MQ=255)
                                              aCGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGtt                                                                                        >  1:1197359/1‑140 (MQ=255)
                                                   gCGGAGGGTTATCACGAGAGCTTAAGCGAGATTACTCACCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCa                                                                                   <  1:706850/140‑1 (MQ=255)
                                                      gAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATAc                                                                                <  2:1197359/140‑1 (MQ=255)
                                                       aGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACg                                                                               <  2:347512/140‑1 (MQ=255)
                                                         ggTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCg                                                                                             >  2:1193041/1‑124 (MQ=255)
                                                         ggTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGtt                                                                             >  2:940454/1‑140 (MQ=255)
                                                             aTCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGccc                                                                         <  2:1719550/140‑1 (MQ=255)
                                                              tCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCg                                                                        >  1:454787/1‑140 (MQ=255)
                                                              tCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCg                                                                        >  2:154043/1‑140 (MQ=255)
                                                              tCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTCTGATCGTTCAAAAATCATCGATGGGCGATGTTCTCCATACGTTGCCCg                                                                        >  2:706850/1‑140 (MQ=255)
                                                                aCCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGca                                                                      <  2:1722383/140‑1 (MQ=255)
                                                                   agagCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGCTCTCCATACGTTGCCCGcactc                                                                   >  1:860432/1‑140 (MQ=255)
                                                                    gagCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGcactca                                                                  >  1:612523/1‑140 (MQ=255)
                                                                     agCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGcactcac                                                                 >  2:1348258/1‑140 (MQ=255)
                                                                     agCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGcactcac                                                                 >  1:1625466/1‑140 (MQ=255)
                                                                     agCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGATAAAACATCGTCGATGGGCGATGTTATCCAAACGTTGCCCGcactcac                                                                 >  2:668927/1‑140 (MQ=255)
                                                                         tAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGAt                                                             <  1:1169077/140‑1 (MQ=255)
                                                                          aaTCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATg                                                            <  2:484561/140‑1 (MQ=255)
                                                                              gACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCca                                                        <  1:154043/140‑1 (MQ=255)
                                                                                 aTTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCcagca                                                     >  2:1662978/1‑140 (MQ=255)
                                                                                   gaCTCCCCAGCGCGTACGGGAAGAACTCAACCCGCTATTTTTACAAGAAGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAgg                                                   <  2:730443/139‑1 (MQ=255)
                                                                                          cAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATccc                                            >  2:1695872/1‑140 (MQ=255)
                                                                                          cAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATccc                                            >  2:1504634/1‑140 (MQ=255)
                                                                                          cAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATccc                                            >  2:1404293/1‑140 (MQ=255)
                                                                                          cAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATccc                                            <  2:470481/140‑1 (MQ=255)
                                                                                           aGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCa                                           <  1:1695872/140‑1 (MQ=255)
                                                                                             cgcgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCATTCACTGATGCCCAGCAGGCAATCCCAgg                                         >  2:182285/1‑140 (MQ=255)
                                                                                             cgcgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAgg                                         >  2:857451/1‑140 (MQ=255)
                                                                                             cgcgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAgg                                         >  1:1477041/1‑140 (MQ=255)
                                                                                             cgcgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTCTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGc                                                  <  2:125681/131‑1 (MQ=255)
                                                                                             cgcgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTCTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGc                                                  >  1:125681/1‑131 (MQ=255)
                                                                                               cgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGccc                                                         >  2:1828470/1‑122 (MQ=255)
                                                                                               cgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGccc                                                         <  1:1828470/122‑1 (MQ=255)
                                                                                               cgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGa                                       <  2:225084/140‑1 (MQ=255)
                                                                                               cgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGa                                       <  1:857451/140‑1 (MQ=255)
                                                                                               cgTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTCCCCGCACTCACAGAGGCCCAGAAGGCAATCCCAgggc                                       >  1:730443/1‑139 (MQ=255)
                                                                                                  aCTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTa                                    >  1:126026/1‑140 (MQ=255)
                                                                                                  aCTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTa                                    >  1:83927/1‑140 (MQ=255)
                                                                                                      gaagaaCTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGtt                                >  1:1370214/1‑140 (MQ=255)
                                                                                                      gaagaaCTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTGGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGtt                                >  2:1118499/1‑140 (MQ=255)
                                                                                                           aCTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCATTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACt                           <  1:182285/140‑1 (MQ=255)
                                                                                                            cTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCGCGCACTCATTGATGCCCCGCAGGCAGTCCCGGGGATTAAATTTGACTg                          >  2:920817/1‑140 (MQ=255)
                                                                                                            cTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCa                                           >  1:997470/1‑123 (MQ=255)
                                                                                                            cTCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTg                          >  2:937652/1‑140 (MQ=255)
                                                                                                            cTCAACGCGCTATTGTTACAAGAGGAAGTCTCACGGATGCGGGTTTTGCTCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTg                          <  2:612523/140‑1 (MQ=255)
                                                                                                             tCAACGCGTTATTGTTTAAAGGTGAAGTCTACCGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGATTgg                         <  2:912361/140‑1 (MQ=255)
                                                                                                             tCAACGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTgg                         <  1:1331192/140‑1 (MQ=255)
                                                                                                                aCGCGCTATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGCCAACCCCAGGGATGAAGTTTGACTGggtg                      >  1:912361/1‑140 (MQ=255)
                                                                                                                 cgcgCTATTGTTACACGAGGAAATCCGACCGATGCGGATTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGggtgg                     <  1:535296/140‑1 (MQ=255)
                                                                                                                      tATTGTTACAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGgaa                >  1:1455909/1‑140 (MQ=255)
                                                                                                                              cAAGAGGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGtt        <  2:454787/140‑1 (MQ=255)
                                                                                                                                agagGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACGTCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCg      >  1:165290/1‑140 (MQ=255)
                                                                                                                                agagGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCg      >  1:1104702/1‑140 (MQ=255)
                                                                                                                                agagGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCg      >  1:1182165/1‑140 (MQ=255)
                                                                                                                                agagGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCg      >  1:1205170/1‑140 (MQ=255)
                                                                                                                                agagGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCg      >  2:361500/1‑140 (MQ=255)
                                                                                                                                agagGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCg      >  2:264014/1‑140 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGtt        >  1:1406940/1‑136 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    >  1:229481/1‑140 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    >  1:319962/1‑140 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    >  1:1368951/1‑140 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    >  1:1239599/1‑140 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    >  2:1130643/1‑140 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    <  2:1455909/140‑1 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATACCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    >  1:1146513/1‑140 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATACCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    <  2:1146513/140‑1 (MQ=255)
                                                                                                                                  agGAAGTCTGACGGATGCGGGATTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGca    >  2:1215976/1‑140 (MQ=255)
                                                                                                                                    gAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGTTTAAGTTGGACAGGGTGGTGGAAGAATGGTTCGcaca  >  1:563143/1‑140 (MQ=255)
                                                                                                                                    gAAGTCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATGAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGcaca  >  2:703780/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                       
CGCGTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGCCTGACGGATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGCACA  >  NC_000913/3795835‑3796106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑