| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,469,600 | A→G | D659G (GAC→GGC) | mgtA → | Mg(2(+)) importing P‑type ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,469,600 | 0 | A | G | 99.2% | 449.7 / NA | 126 | D659G (GAC→GGC) | mgtA | Mg(2(+)) importing P‑type ATPase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (59/65); total (60/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 128 total aligned reads displayed.
TGTTTGCCCGCCTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGACGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAATACATCAAAATGACGGCG > NC_000913/4469462‑4469733 | tGTTTGCCCGCCTGACGCCGATGCA‑AAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTTATGATGCGACCGGCTTACGCGCTGCTGATAGCGGCATTTCTGTGGGCg > 2:616067/1‑140 (MQ=255) tttGCCCGCCTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCgg < 1:322127/140‑1 (MQ=255) ttGCCCGCCTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGggcggc < 1:1879856/140‑1 (MQ=255) ttGCCCGCCTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGggcggc < 2:1818865/140‑1 (MQ=255) ccTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGTGCTGCGGATATAGGAATTTCTATGGGCGGCGCGGTAg > 1:532075/1‑140 (MQ=255) ccTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAg > 1:102166/1‑140 (MQ=255) aCGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGatat < 2:102166/140‑1 (MQ=255) aTGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATCTCGGCATGTCTCTGCGCGGCGAGGTAGATATTGCCCg > 1:615281/1‑140 (MQ=255) tGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGt > 1:41206/1‑140 (MQ=255) tGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGAGCTGCGGAGATCAGCAGTTCTGTGGACGGCACGGTAGATATTGCCCGt > 2:533844/1‑140 (MQ=255) aTAAAGAACGCATTGTGACCTTTCTGAAGCAAGAAAGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGaa < 2:894543/140‑1 (MQ=255) tAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAg > 2:1272658/1‑140 (MQ=255) tAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTCCGGATATCGGCAGTTCGGTGGGCGGCGCGGTAGATATTGCCCGTGAAg > 2:543886/1‑140 (MQ=255) aGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAg < 1:1375755/137‑1 (MQ=255) aGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAg > 2:1375755/1‑137 (MQ=255) gAACGCATTGTGACCTTGCGGATGCGCGAAGGGCACGTGCTTGGCTTTTTGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGc < 2:714231/140‑1 (MQ=255) gAACGCATTGTGACCTTCCTGAAGCGCGAATGGCATGTGGTTGGCTTTTTGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGACATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGc < 2:930006/140‑1 (MQ=255) gAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGc < 2:1445306/140‑1 (MQ=255) aaCGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCt < 1:1075136/140‑1 (MQ=255) aCGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTg < 2:1783946/140‑1 (MQ=255) aCGCATTGTGACCTTACTGAAGCGCGAAGGG‑ATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGa > 2:1389267/1‑131 (MQ=255) aCGCATTGTGACCTTACTGAAGCGCGAAGGG‑ATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGa < 1:1389267/131‑1 (MQ=255) cGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGa > 2:11393/1‑140 (MQ=255) cGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGa > 2:393798/1‑140 (MQ=255) cGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGa > 1:469889/1‑140 (MQ=255) ttGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGTATTTCTGTGGGCCGCGTGGTAGATAATGCCGGTGAAGCGGCTGATatc > 2:639620/1‑140 (MQ=255) tgACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATatcatc < 2:187244/140‑1 (MQ=255) gACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATcc > 1:1829922/1‑140 (MQ=255) gACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATcc > 1:173790/1‑140 (MQ=255) gACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATcc < 1:12772/140‑1 (MQ=255) gACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCAGCGCGGTTGATATTGCTCGTGAAGCGGCTGATATCATcc > 2:747265/1‑140 (MQ=255) tACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGGAGCGGCGGATATCATCctgctg > 1:519004/1‑140 (MQ=255) cTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGa > 2:1798318/1‑140 (MQ=255) aGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGaaaaa > 1:201495/1‑140 (MQ=255) gcgcGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGaaaaaa < 1:1272658/140‑1 (MQ=255) gcgcGAAGGGCATGTGGTTGGCCTTCTGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGaaaaaa < 1:543886/140‑1 (MQ=255) cgcgAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAg > 2:1891882/1‑140 (MQ=255) cgAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAGGCGGCTGATATCATCCTGCTGGAAAAAAGcc > 2:620916/1‑140 (MQ=255) cgAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCACGTGAAGAGGCCGAGATCATCTTGCTGGAAAAAAGcc > 1:596514/1‑140 (MQ=255) aaGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATCATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTg > 2:1101352/1‑140 (MQ=255) aGGGCATGTGGTTGGTTTTATGTGCAATGCTATTAATAATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGa < 1:639620/140‑1 (MQ=255) aGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGa < 1:80676/140‑1 (MQ=255) gggCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGAt < 1:245803/140‑1 (MQ=255) gggCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGAt < 1:1278868/140‑1 (MQ=255) gggCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGAt < 1:212352/140‑1 (MQ=255) aTGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTg < 2:469889/140‑1 (MQ=255) ttGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGaa < 2:340122/140‑1 (MQ=255) tGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAag > 1:175097/1‑140 (MQ=255) ggCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTg < 1:1651086/126‑1 (MQ=255) ggCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTg > 2:1651086/1‑126 (MQ=255) ggCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAaga < 2:147887/140‑1 (MQ=255) ggCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAaga < 1:1891882/140‑1 (MQ=255) cTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAgg < 1:1651585/140‑1 (MQ=255) tttATGGGCGATGGTTTTAATGGTGGGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggg < 1:747265/140‑1 (MQ=255) ttATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAgggg < 1:393798/140‑1 (MQ=255) tATGGGCGATGGTATTACTGATCCGCCCGCCTTACCCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggggg < 2:596514/140‑1 (MQ=255) tATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggggg < 2:5453/140‑1 (MQ=255) tATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggggg > 2:1392894/1‑140 (MQ=255) tATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggggg < 1:1392894/140‑1 (MQ=255) tATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggggg < 1:1429209/140‑1 (MQ=255) aTGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGt > 2:232781/1‑140 (MQ=255) aTGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAg < 1:429719/140‑1 (MQ=255) aTGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAg > 1:1622968/1‑140 (MQ=255) gTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGa < 1:7161/140‑1 (MQ=255) atgatgCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggggg < 1:141791/123‑1 (MQ=255) atgatgCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggggg > 2:141791/1‑123 (MQ=255) atgatgCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAggggg < 1:159370/123‑1 (MQ=255) gatgCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCAc > 1:242887/1‑140 (MQ=255) gatgCGCCCGCCTTACGCGCTGCGGATATC‑GCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACt > 2:1796489/1‑140 (MQ=255) atgCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACt < 2:1344441/140‑1 (MQ=255) gcgcCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAGGAGGGGTTTATTGAGGGACGTCGCACttt > 1:718146/1‑140 (MQ=255) gcgcCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTAt < 1:1716674/122‑1 (MQ=255) gcgcCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTAt > 2:1716674/1‑122 (MQ=255) gcgcCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACttt > 2:1494768/1‑140 (MQ=255) gcgcCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACttt > 1:1493339/1‑140 (MQ=255) gcgcCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACttt > 1:1509401/1‑140 (MQ=255) gcgcCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACttt > 1:1688142/1‑140 (MQ=255) cgcccgccTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTc > 1:1055508/1‑140 (MQ=255) gcccgccTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTc > 1:1087950/1‑131 (MQ=255) gcccgccTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTc < 2:1087950/131‑1 (MQ=255) gcccgccTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCg > 2:1300952/1‑140 (MQ=255) ccgccTTACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGcc > 1:856563/1‑140 (MQ=255) agccTTACGCGCTGCGGCTATCAGCATTTCTCTGGTCGGCGCGGTAGAGATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCa < 2:727165/139‑1 (MQ=255) gccTTACGCGCTGCGTATATCGTCATTTCCGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCaa < 1:616067/140‑1 (MQ=255) cTTACGCGCTGCGGATCTCGGCATTTCTGTGGGAGCCGCTGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACa < 2:856563/140‑1 (MQ=255) tACGCGCTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATg < 2:1829922/140‑1 (MQ=255) tACGCGCTGCGGATATCCGCATCTCTGTGGGCGGCTCGGGAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATg < 2:519004/140‑1 (MQ=255) gcTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAACAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCGCTTTCGCCAACATGCTGaa < 2:1640588/140‑1 (MQ=255) cTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGaaa < 2:360695/140‑1 (MQ=255) cTGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGaaa < 1:11393/140‑1 (MQ=255) tGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAAt > 1:1821759/1‑140 (MQ=255) tGCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAAt > 1:1818909/1‑140 (MQ=255) gCGGATATCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAATa > 1:1438941/1‑140 (MQ=255) atCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGAGGTTATTGAGGGGCGTGGCACTTTCGCCAAGATGCTGAAATACATCaa > 2:491768/1‑140 (MQ=255) atCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGG‑AAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATg > 2:1672020/1‑125 (MQ=255) atCGGCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGG‑AAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATg < 1:1672020/125‑1 (MQ=255) ggCATTTCTGTGGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACCTTCGCCAACATGCCGAAATACATCAAAAt > 1:736143/1‑140 (MQ=255) ttCTGTGGGCGGCGCCGTAGATTTTACCCATGAAGCGCCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAATACATCAAAATGACgg < 1:491768/140‑1 (MQ=255) cTGTGGGCGGCGCGGTAGATATTGCCCGTGAGGCGGCTGCTATCATCCGGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAATACATCAAAATGACGGCg < 2:736143/140‑1 (MQ=255) tgGGCGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAATACATCAAAATGACGGc < 1:179904/136‑1 (MQ=255) | TGTTTGCCCGCCTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGACGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAATACATCAAAATGACGGCG > NC_000913/4469462‑4469733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |