| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,557,577 | G→A | A238V (GCC→GTC) | hypT ← | DNA‑binding transcriptional dual regulator HypT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,557,577 | 0 | G | A | 99.2% | 405.0 / NA | 121 | A238V (GCC→GTC) | hypT | DNA‑binding transcriptional dual regulator HypT |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (65/54); total (66/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
GCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGGCAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACGGAAAGTGT > NC_000913/4557441‑4557711 | gCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACaa < 1:1539891/140‑1 (MQ=255) cGGGTATTGATCCGGTTAGCATTGGCCTGATTCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAAc < 2:869823/140‑1 (MQ=255) gggTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCTGCAACCAGGCAAACCCAAAGCCGTCGAGGACAAcc > 2:640461/1‑140 (MQ=255) gggTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAAcc < 1:158166/140‑1 (MQ=255) ttCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTGGAGGACAAccctgtc > 1:821770/1‑135 (MQ=255) aTCCGGTATGC‑‑AGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACaa < 1:1318136/128‑1 (MQ=255) aTCCGGTATGC‑‑AGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACaa > 2:1318136/1‑128 (MQ=255) ggTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgc > 2:1019584/1‑140 (MQ=255) gagacagggCCTGAACCGGGATGACGAGTCCGTCCCGCTTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcg < 1:570384/133‑1 (MQ=255) aTGCATAGGCCTGAATCCGGATCACCAGTTCCTCCTGATCCAGTACAAGGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcg < 2:542705/140‑1 (MQ=255) tGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcgc > 2:1077174/1‑140 (MQ=255) tGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcgc < 1:688217/140‑1 (MQ=255) tGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcg > 1:385122/1‑139 (MQ=255) tGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcg < 2:385122/139‑1 (MQ=255) aTAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCCCAGCCGTGGAGGACAACCTGCGTTAAAAGCTCGCTCa > 1:487356/1‑140 (MQ=255) ggCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCg > 2:1456999/1‑140 (MQ=255) gCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcgctc < 2:1485355/135‑1 (MQ=255) gCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAg > 2:1044863/1‑128 (MQ=255) gCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAg < 1:1044863/128‑1 (MQ=255) gCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGa < 1:1506087/140‑1 (MQ=255) gCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGa > 1:85014/1‑140 (MQ=255) ccTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCTGTCGAGGGCAATCTGCTTTAACAGCTCGCTCATCGaa > 1:597923/1‑140 (MQ=255) ccTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGaa > 2:291337/1‑140 (MQ=255) tGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcg > 1:917427/1‑129 (MQ=255) tGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAgctcg < 2:917427/129‑1 (MQ=255) tGAATCGGGATCACCAGGTCGTCCCGATTCAGTACAACGAGCTTCCCGTTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAaga < 2:686566/140‑1 (MQ=255) aaTCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCTAGGACAAACTGTTTTAAAAGCACGCTCATCGAAgaga > 1:910199/1‑140 (MQ=255) aaTCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAgaga > 1:335969/1‑140 (MQ=255) aaTCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAgaga > 2:1547782/1‑140 (MQ=255) aaTCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGATTAAAAAGCACGCTCATCGAAgaga > 1:788947/1‑140 (MQ=255) aaTCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGACGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAgaga > 2:668189/1‑140 (MQ=255) ggATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACATCCGTCGAGCACAGCCTCCTTTAAAAACTCGATCATCGAagactgtctc > 2:570384/1‑133 (MQ=255) ggATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACaaaa > 1:1223199/1‑140 (MQ=255) ggATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGACGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACaaaa > 1:252787/1‑140 (MQ=255) tCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAg < 2:85014/140‑1 (MQ=255) aGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCt < 1:1870821/140‑1 (MQ=255) gTTCGTCCCGATTCAGTTCAACAAGCTTCCCCCTGTGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTg < 2:678521/140‑1 (MQ=255) gTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTg < 1:1019584/140‑1 (MQ=255) gTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTg < 2:225194/140‑1 (MQ=255) gTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTg < 1:1456999/140‑1 (MQ=255) ttCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTg > 1:483672/1‑139 (MQ=255) ttCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTg < 2:483672/139‑1 (MQ=255) tCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGaa < 2:1431495/140‑1 (MQ=255) cGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGCAGAGACAAAAAAGGTGCTGaaa > 1:685405/1‑140 (MQ=255) gTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAAc < 2:46250/140‑1 (MQ=255) tCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTGATCGAACAGACAAAAAAGGTGCTGAAACt > 1:899371/1‑140 (MQ=255) tCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACt < 2:1521246/140‑1 (MQ=255) cccaaTTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACtt > 1:1799214/5‑140 (MQ=255) gATTCAGTACAAGGAGCTTCCCGCATTGAATTTCTTGTTGGATGGCGTGCTCCGGCGGCCAGGCAAGCCCACAGCCGCCGCGGACAACCTGCTTTAAAAGCTCGCTCATCCAAGAGACAAAAAAGGTGCTGAAACttcag > 2:1116191/1‑137 (MQ=255) aTTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACt < 2:335969/140‑1 (MQ=255) aGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCC‑‑‑GCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACtgtg > 1:1114776/1‑140 (MQ=255) tACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATGGAAGAGAAAAAAAAGGTGCTGAAACTTAACTCACtgt > 1:568395/1‑140 (MQ=255) tACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAAc > 2:1736990/1‑133 (MQ=255) tACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACtgt > 2:1364007/1‑140 (MQ=255) cGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGGGACAAAAGAGGGGCGGAAACTGAACTCACTGTGgcgc > 1:522783/1‑140 (MQ=255) gCTTCCCGCTGCGAATTACTTGGTGGATGGCGTACTCCGCCAGCCAGGAAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTc < 2:788947/140‑1 (MQ=255) ttCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAAc > 1:1044435/1‑71 (MQ=255) ttCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAAc < 2:1044435/71‑1 (MQ=255) ttCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGTAAGTTAACTGACTGTGGCGCGTctg > 1:883950/1‑138 (MQ=255) ttCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAg > 2:997153/1‑140 (MQ=255) ttCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAg > 2:1674141/1‑140 (MQ=255) cccGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAggg < 1:1530938/140‑1 (MQ=255) cccGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAggg < 1:997153/140‑1 (MQ=255) ccGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGt < 1:1170530/140‑1 (MQ=255) gCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGc > 1:1628777/1‑140 (MQ=255) cTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCg > 2:295801/1‑140 (MQ=255) ttCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTaatca < 1:1547782/140‑1 (MQ=255) tgttgGATGGCGTACTCGGGCACCCAGGCAATCCCTCAGCCGTCGAGGTCAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCg < 2:522783/140‑1 (MQ=255) gttgGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTa < 2:1471676/131‑1 (MQ=255) gttgGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTa > 1:1471676/1‑131 (MQ=255) ttgGATGGGGTACTCCGACAGCTAGGCAATCCCTCCGCCCTCGAGGACCACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGcc < 2:899371/140‑1 (MQ=255) ttgGATGGCGTACTGCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGcc < 1:410368/140‑1 (MQ=255) ttgGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGcc < 2:1628777/140‑1 (MQ=255) ttgGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGcc < 1:1364007/140‑1 (MQ=255) ttgGATGGCGTACTCCGCCAGCCAGGCAATTACACAGCCTTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGcc < 2:910199/140‑1 (MQ=255) tGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGcc < 1:467629/135‑1 (MQ=255) tGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGcc > 2:467629/1‑135 (MQ=255) ggCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGt > 1:1055551/1‑140 (MQ=255) cTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGt > 2:303817/1‑140 (MQ=255) tCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGtt > 2:1268449/1‑140 (MQ=255) cGGCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGc < 1:1674141/140‑1 (MQ=255) gCAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCgg > 1:1428836/1‑140 (MQ=255) cAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGc < 2:1055551/140‑1 (MQ=255) cAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGc < 1:143477/140‑1 (MQ=255) cAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGGGGCGCGTCTGGGTGCGGTTAATCAAGCGCCACATGTAGGAGTTGCGGc > 2:520382/1‑140 (MQ=255) cAGCCAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGAGGCGCGTCAGGGGGCGATTAATCAAACGCCTCATGTAGGAGTTGCGGc > 2:604278/1‑140 (MQ=255) cAGCCAGGCAATCCCACAACCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGAGGCGCGTCCGGGCGCGCTTAATCAACCGCCCCATGTAGGAGTTGCGGc > 2:761744/1‑140 (MQ=255) ccAGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAAGCGGCCCATGGAGGAGTTGCGGCTGt > 1:539300/1‑140 (MQ=255) aGGCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCTCCGCATGTAGGAGTTGCGGCTGTaa > 1:683936/1‑140 (MQ=255) gCAATCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAAtt < 1:1268449/140‑1 (MQ=255) aaTCCCACAGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCa < 1:668189/140‑1 (MQ=255) tCCCACAGCCGTCGACGACAACCTGGTTTCAAAGCTCCCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGt < 1:520382/140‑1 (MQ=255) acaGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACg < 1:1688026/140‑1 (MQ=255) aGCCGTCGAGGACAACCTGCTTTAAGAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACGGa < 1:621484/140‑1 (MQ=255) aGCCGTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACGGa > 1:1839662/1‑140 (MQ=255) gTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACGGAAAgt > 2:1235704/1‑140 (MQ=255) gTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCACCACGTAGGAGTTGCGTCTGTGATTCAGTAACGGAAAgt > 2:621484/1‑140 (MQ=255) gTCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGCGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACGGAAAgt > 1:1814249/1‑140 (MQ=255) tCGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACGGAAAgtg > 1:1710468/1‑140 (MQ=255) cGAGGACAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACGGAAAgtgt > 1:217037/1‑140 (MQ=255) | GCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCGTACTCCGGCAGCCAGGCAATCCCACAGCCGTCGAGGGCAACCTGCTTTAAAAGCTCGCTCATCGAAGAGACAAAAAAGGTGCTGAAACTTAACTCACTGTGGCGCGTCAGGGTGCGATTAATCAATCGCCCCATGTAGGAGTTGCGGCTGTAATTCAGTAACGGAAAGTGT > NC_000913/4557441‑4557711 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |