BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	746,405	A→G	L157L (TTA→TTG)	nei →	endonuclease VIII

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	746,405	0	A	G	100.0%	390.7 / NA	106	L157L (TTA→TTG)	nei	endonuclease VIII
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (46/60); total (46/60)

Only 100 of 110 total aligned reads displayed.

TTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTACTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGCACACGCGTTA  >  NC_000913/746268‑746540

ttGACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCt                                                                                                                                       >  1:213451/1‑140 (MQ=255)

ttGACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCt                                                                                                                                       >  1:419629/1‑140 (MQ=255)

  gACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATtgctgc                                                                                                                                     <  1:1309268/140‑1 (MQ=255)

      ccGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGa                                                                                                                                 <  2:39200/140‑1 (MQ=255)

       cGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCGGGATTGCTGCTCGAt                                                                                                                                >  1:588455/1‑140 (MQ=255)

          aacaacTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAg                                                                                                                             >  1:450303/1‑140 (MQ=255)

          aacaacTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAg                                                                                                                             <  2:1527764/140‑1 (MQ=255)

          aacaacTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAg                                                                                                                             >  1:375047/1‑140 (MQ=255)

           acaacTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAgg                                                                                                                            <  1:1260226/140‑1 (MQ=255)

           acaacTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAgg                                                                                                                            <  1:1603626/140‑1 (MQ=255)

           acaacTGACCACGCATATGTTTTTACAACGCGTGGATCCGGATGTGCTGGATCTGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAgg                                                                                                                            <  2:857559/140‑1 (MQ=255)

             aacTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCg                                                                                                                          >  1:977395/1‑140 (MQ=255)

               cTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGtt                                                                                                                        >  1:1398966/1‑140 (MQ=255)

               cTGACCACGCATCCGATTTTACTACGCGTCGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGtt                                                                                                                        <  1:485469/140‑1 (MQ=255)

               cTGACCACACATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGtt                                                                                                                        <  1:199044/140‑1 (MQ=255)

               atGACCACCCATCCGTTCTTTAGACGCGTTCGTCCAGCTGTGCTGGATTCGAATCTGTCGTCGGAGGTGGTGCAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGtt                                                                                                                        <  2:899026/139‑1 (MQ=255)

                tGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGttt                                                                                                                       <  2:75787/140‑1 (MQ=255)

                  aCCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACTGTCAGTTTGCTGGATTGCTGCGCGATCAGGCGTTTct                                                                                                                     >  1:633959/1‑140 (MQ=255)

                  aCCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATtgctgc                                                                                                                                     >  1:1007402/1‑124 (MQ=255)

                    cACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCGGTTAGCTGGATTGCTGCGCGATCAGGCGTTTctgg                                                                                                                   >  2:740185/1‑140 (MQ=255)

                     aCGCATCCGTTTTTACACCGCGGTGGTCCCGAT‑AGCTGGGTCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTctggct                                                                                                                 <  2:828344/140‑1 (MQ=255)

                     aCGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTctggc                                                                                                                  <  1:1455783/140‑1 (MQ=255)

                      cGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTctggct                                                                                                                 <  1:1628771/140‑1 (MQ=255)

                       gCATCCGTTTTTACAACGCGTTTGTCCCGATTTGCTGGATCCGAATCTAACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTctggctg                                                                                                                <  2:786428/140‑1 (MQ=255)

                         aTCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTggg                                                                                                              <  2:1854/140‑1 (MQ=255)

                         aTCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTggg                                                                                                              <  2:1215052/140‑1 (MQ=255)

                         aTCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTggg                                                                                                              >  1:289199/1‑140 (MQ=255)

                         aTCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCCGCACGATCACGCGTTTCTGGCTggg                                                                                                              >  1:854569/1‑140 (MQ=255)

                            cGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCtt                                                                                                           >  2:354544/1‑140 (MQ=255)

                             gTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTg                                                                                                          <  1:1868249/140‑1 (MQ=255)

                                      aCGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTg                                                                                                          <  1:34045/131‑1 (MQ=255)

                                      aCGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTg                                                                                                          >  2:34045/1‑131 (MQ=255)

                                        gcgTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTctggct                                                                                                                 >  1:1653057/1‑122 (MQ=255)

                                        gcgTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTctggct                                                                                                                 <  2:1653057/122‑1 (MQ=255)

                                        gcgTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTg                                                                                               <  1:179414/140‑1 (MQ=255)

                                        gcgTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTg                                                                                               <  2:1187111/140‑1 (MQ=255)

                                        gcgTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGCTTGCTGGATTGCTGCTCGATCAGACGTATCAGGCTGGACTTGGCAATTATTTg                                                                                               >  1:891071/1‑140 (MQ=255)

                                         ggTTGGTCGCGATGTGCTGGATGCGAATCTGTCGCTGGATGTGGTGAACGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGc                                                                                              <  2:891071/139‑1 (MQ=255)

                                         gacaggTCCCGATGTCCGGGTTACGTATCTGACGCCGTAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGc                                                                                              <  1:571726/136‑1 (MQ=255)

                                                cccGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGga                                                                                       <  1:477324/140‑1 (MQ=255)

                                                cccGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGga                                                                                       <  1:354544/140‑1 (MQ=255)

                                                  cGATGTGCTGGATCCGAATCTGTCGCCGGAGGTGGTGAATGAACGATTTTTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGgaga                                                                                     <  2:588455/140‑1 (MQ=255)

                                                  cGATGTGCCGGATCCGTATCTGTCGCCGGAGGTCGGGAAGGAACGATTTTTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGgaga                                                                                     <  2:854569/140‑1 (MQ=255)

                                                   gATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGAt                                                                                    >  1:1546070/1‑140 (MQ=255)

                                                    aTGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATc                                                                                   >  1:1859107/1‑140 (MQ=255)

                                                      gtgCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTTCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCAGGTGGAGATCct                                                                                 <  2:134666/140‑1 (MQ=255)

                                                        gCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCctct                                                                               >  2:1466417/1‑140 (MQ=255)

                                                        gCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCctct                                                                               >  1:1048630/1‑140 (MQ=255)

                                                         cTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTg                                                                              >  1:375790/1‑140 (MQ=255)

                                                         cTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTg                                                                              <  2:1398966/140‑1 (MQ=255)

                                                         cTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTg                                                                              >  1:1012077/1‑140 (MQ=255)

                                                         cTGCATCAGAACCTGCCGCCCGCGGTGGTGAACGAACGATTATTATCGCCGCACTTTCGTAACCGTCAGTTTGCTGGAGTGCTGCTCGCTCAGGCGTTTCAGGCAGGGATTGGCGAATATTTTCGGGTGCAGATCctgtc                                                                              >  2:571726/1‑137 (MQ=255)

                                                           ggATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGTTTGGCAATTATTTGTGGGTGGAGATCCTCTGGc                                                                            <  1:263071/140‑1 (MQ=255)

                                                           ggATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGc                                                                            >  1:360715/1‑140 (MQ=255)

                                                              tCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAgg                                                                         >  1:178391/1‑140 (MQ=255)

                                                                 gAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGc                                                                            >  2:951261/1‑134 (MQ=255)

                                                                 gAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGc                                                                            <  1:951261/134‑1 (MQ=255)

                                                                 gAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAggttg                                                                      >  2:1768292/1‑140 (MQ=255)

                                                                   aTCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAggttggg                                                                    <  2:375790/140‑1 (MQ=255)

                                                                    tCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAggttgggt                                                                   <  2:1859107/140‑1 (MQ=255)

                                                                      tGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGAGGGGGGGGATCCTGTGGCAggttgggttg                                                                 >  1:584698/1‑140 (MQ=255)

                                                                       gACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGa                                                                >  2:1496464/1‑140 (MQ=255)

                                                                        aCGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCACTTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGAc                                                               >  2:763011/1‑140 (MQ=255)

                                                                         cGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACt                                                              <  2:450303/140‑1 (MQ=255)

                                                                            cGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGa                                                           >  1:1130803/1‑140 (MQ=255)

                                                                            cGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGCAGATCCGCTGGCACGTTGGGTTGACTGGa                                                           >  1:893563/1‑140 (MQ=255)

                                                                               aGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAAt                                                        <  2:213451/140‑1 (MQ=255)

                                                                                    gtgAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATaa                                                   >  2:372587/1‑140 (MQ=255)

                                                                                      gAAAGAACGATTATTCTCGCCGTGCTTTCTTAACCGTAAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAg                                                 <  1:740185/140‑1 (MQ=255)

                                                                                        aaGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCg                                               <  2:1407071/140‑1 (MQ=255)

                                                                                          gAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGaa                                             <  1:93945/140‑1 (MQ=255)

                                                                                          gAACGATTATTGTCGCCCCGCTTTCGTAACCTTCATTTTCCTGGATTGATGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGaa                                             <  2:494583/140‑1 (MQ=255)

                                                                                           aaCGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGaaa                                            <  2:1545603/140‑1 (MQ=255)

                                                                                           aaCGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGaaa                                            <  1:1768292/140‑1 (MQ=255)

                                                                                           aaCGATTATTGTCGCCGAGCTTGCGTAACCGTCAGGTTGGTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGaaa                                            <  2:633959/140‑1 (MQ=255)

                                                                                               attattGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGAtc                                        >  1:1244892/1‑140 (MQ=255)

                                                                                                ttattGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGAtct                                       >  2:483129/1‑140 (MQ=255)

                                                                                                 tattGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCCGGTTGGGATGATTGGAAATCAGAAAGCGAAAGAtctc                                      >  1:494583/1‑140 (MQ=255)

                                                                                                 tattGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGAtct                                       >  1:1373464/1‑139 (MQ=255)

                                                                                                 tattGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGAtct                                       <  2:1373464/139‑1 (MQ=255)

                                                                                                     gTCGCCGCGCTTTCGTACCCGTGAGTTTGCTAGATTGCTTGTCGATCATGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATg                                  <  2:663501/140‑1 (MQ=255)

                                                                                                        gccgcGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATgcgg                               >  2:1539999/1‑140 (MQ=255)

                                                                                                        gccgcGCTTTCGTAACCGTCAGTTTGCTGGATTGCGGCTAGATCAGGCATTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATgcgg                               <  2:584698/140‑1 (MQ=255)

                                                                                                         ccgcGCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATgcggc                              >  2:1026756/1‑140 (MQ=255)

                                                                                                          cgcgCTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATgcggcg                             <  2:289199/140‑1 (MQ=255)

                                                                                                            cgcTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCa                           <  1:372587/140‑1 (MQ=255)

                                                                                                             gcTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCaa                          <  2:360715/140‑1 (MQ=255)

                                                                                                              cTTTCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAAc                         <  1:763011/140‑1 (MQ=255)

                                                                                                               tttCGTAACCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACt                        <  2:375047/140‑1 (MQ=255)

                                                                                                                      aCCGTCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGGAAGATCTCAATGCAGCGCAACTGGATGCa                 >  1:739823/1‑140 (MQ=255)

                                                                                                                          tCAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCg             <  2:1244892/140‑1 (MQ=255)

                                                                                                                           cAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTg                       >  1:401654/1‑129 (MQ=255)

                                                                                                                           cAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTg                       <  2:401654/129‑1 (MQ=255)

                                                                                                                           cAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGc            >  2:1861360/1‑140 (MQ=255)

                                                                                                                           cAGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGc            >  2:1188583/1‑140 (MQ=255)

                                                                                                                            aGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGca           <  1:969699/140‑1 (MQ=255)

                                                                                                                            aGTTTGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGCCGCAACTGGATGCAc                <  2:72982/135‑1 (MQ=255)

                                                                                                                                tGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGCACAcg       <  1:1496464/140‑1 (MQ=255)

                                                                                                                                tGCTGGATTGCTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGCACAcg       <  2:1048630/140‑1 (MQ=255)

                                                                                                                                     gATTGCTGCTCGATCAGGCGTTACTGGCTGGTCTTCGCACTTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGCACACGCGTTa  <  2:616419/140‑1 (MQ=255)

TTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTACTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGCACACGCGTTA  >  NC_000913/746268‑746540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`