BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,190,062	A→G	L129P (CTC→CCC)	phoP ←	DNA‑binding transcriptional dual regulator PhoP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,190,062	0	A	G	100.0%	429.3 / NA	118	L129P (CTC→CCC)	phoP	DNA‑binding transcriptional dual regulator PhoP
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (63/55); total (63/55)

Only 100 of 121 total aligned reads displayed.

TTAACGAATCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACTTCGACTTTGTCCTGC  >  NC_000913/1189925‑1190196

ttAACGAATCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATACTTCACGGGGAGAGAGATCAACCTGAAAC‑GGGGGGGGc                                                                                                                                      >  1:652735/1‑140 (MQ=255)

ttAACGAATCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGc                                                                                                                                      >  2:1245688/1‑140 (MQ=255)

  aaCGAATCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGa                                                                                                                                    >  2:1029692/1‑140 (MQ=255)

   aCGAATCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGaa                                                                                                                                   <  1:1875760/140‑1 (MQ=255)

       aTCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGa                                                                                                                               <  2:1131808/140‑1 (MQ=255)

       aTCTTTGCTGACCACTTTGCCAGTATTGCGTGTCACCGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGa                                                                                                                               <  2:744958/140‑1 (MQ=255)

                      tttGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGAc                                                                                                                <  1:101895/140‑1 (MQ=255)

                                   cGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTAcgccg                                                                                                   >  1:1054993/1‑140 (MQ=255)

                                      aTCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCAt                                                                                                >  2:1385406/1‑140 (MQ=255)

                                        cAACGTTTCCATAATCGTGTATCCGCACGCGGTCAGTGTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTa                                                                                              <  1:801847/140‑1 (MQ=255)

                                        cAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTa                                                                                                           <  2:1829111/127‑1 (MQ=255)

                                         aaCGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCCCTGTTACGCCGCAGTaa                                                                                             >  2:1748172/1‑140 (MQ=255)

                                             tttCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGTCAGACCGCTATTACGCCGCATTAATGcc                                                                                         <  2:1595083/140‑1 (MQ=255)

                                               tCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGctgg                                                                                       >  1:1344778/1‑137 (MQ=255)

                                               tCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCAGTGAAGCGAGACCGCTATTACGCCGCATTAATGCCTg                                                                                       >  1:907856/1‑140 (MQ=255)

                                                      taGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTcgc                                                                                >  1:176070/1‑140 (MQ=255)

                                                      taGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTcgc                                                                                >  2:1871138/1‑140 (MQ=255)

                                                       aGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGCCCTGTGAAGCCAGACCGCTATTACGACGCACTAATGCCTGCATTcgcg                                                                               >  2:516975/1‑140 (MQ=255)

                                                        gtgtATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCa                                                                                     <  1:1513881/133‑1 (MQ=255)

                                                        gtgtATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCa                                                                                     >  2:1513881/1‑133 (MQ=255)

                                                         tgtATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGcc                                                                             >  1:1575357/1‑140 (MQ=255)

                                                         tgtATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGcc                                                                             >  1:1129007/1‑140 (MQ=255)

                                                         tgtATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACATGTGAAGCAAGACCGCCATTACGCCCCATTAATGCCTGCATTCGCGcc                                                                             >  2:723262/1‑140 (MQ=255)

                                                         tgtATTCGAACGCGGTCAGTTTAATCACTTCTTCACTAATAGATAATTGACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGcc                                                                             <  2:652735/140‑1 (MQ=255)

                                                           tATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCa                                                                            >  1:1637911/1‑140 (MQ=255)

                                                           tATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTCCGCAGCATTAATGACTGCATTCGCGCCAt                                                                           >  1:784813/1‑140 (MQ=255)

                                                           tATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCAt                                                                           <  2:1054993/140‑1 (MQ=255)

                                                           tATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCAt                                                                           >  2:1143207/1‑140 (MQ=255)

                                                             ttCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCa                                                                         <  2:1575357/140‑1 (MQ=255)

                                                              tCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCAc                                                                        <  2:162793/140‑1 (MQ=255)

                                                              tCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCAc                                                                        <  1:42975/140‑1 (MQ=255)

                                                              tCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCAc                                                                        <  1:1385406/140‑1 (MQ=255)

                                                              tCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCAc                                                                        <  1:1871138/140‑1 (MQ=255)

                                                              tCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCAc                                                                        <  1:1245688/140‑1 (MQ=255)

                                                              tCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCAc                                                                        <  2:1306486/140‑1 (MQ=255)

                                                              tCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCAc                                                                        >  1:1440458/1‑140 (MQ=255)

                                                              tCGAACGCCGTCAGTTTAATCATTTCGTCAGCAGTAGATTATTCGCGGTGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCAc                                                                        <  2:899992/140‑1 (MQ=255)

                                                                 aaCGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGGCAGACCGCCATTCCCCCCCATTAATCCCTGCATTCGCGCCATCACctc                                                                     >  2:868092/1‑140 (MQ=255)

                                                                 aaCGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGcc                                                                             >  2:347451/1‑132 (MQ=255)

                                                                 aaCGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGcc                                                                             <  1:347451/132‑1 (MQ=255)

                                                                   cgcgGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCGCCTCtt                                                                   <  2:176070/140‑1 (MQ=255)

                                                                   cgcgGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCtt                                                                   >  1:457972/1‑140 (MQ=255)

                                                                   cgcgGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACCCCGAATTAATGCTTGCATTCGCGCCATCACCTCtt                                                                   >  2:932642/1‑140 (MQ=255)

                                                                   cgcgGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTAGTACACCGAATTAATGCATGCATTCGCGCCATCACCTCtt                                                                   >  2:703696/1‑140 (MQ=255)

                                                                     cgGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGcc                                                                             >  2:181101/1‑128 (MQ=255)

                                                                     cgGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGcc                                                                             <  1:181101/128‑1 (MQ=255)

                                                                     cgGTCAGTTTGATCACTTCGTCATTAATAGATAATTAACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTTCGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCa                                                                 >  2:233549/1‑140 (MQ=255)

                                                                        tCAGCTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCAt                                                                           <  2:527009/127‑1 (MQ=255)

                                                                            tttGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGaa                                                          <  1:1836508/140‑1 (MQ=255)

                                                                            tttGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCACCATCACCTCTTCAATATGaa                                                          <  2:1171304/140‑1 (MQ=255)

                                                                                  caattCGTCATTAATAGAAAAATCACGGAGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGtt                                                    <  2:1344778/137‑1 (MQ=255)

                                                                                  cACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGtt                                                    >  2:374764/1‑140 (MQ=255)

                                                                                  cACTTCGTCATTAATAGATAATGCACGGCGTAACAAATCTACCTGAAAT‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGtt                                                    <  2:907856/140‑1 (MQ=255)

                                                                                  cACTTCGTCATTAATAGATAATACACGGCTAGAGAGAACAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGtt                                                    <  1:723262/140‑1 (MQ=255)

                                                                                     ttCGTCATTAATAGATACTTCACGGCGAGAGTGATCAACCTGAAAC‑GGTGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAg                                                 <  2:784813/140‑1 (MQ=255)

                                                                                      tCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCGTTCGCGCTATCACCGCTTCAAGATGAAACGGTTTAGt                                                >  1:559512/1‑140 (MQ=255)

                                                                                      tCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCCCCCCTTCAAAATGAAACGGTTTAGt                                                >  1:644553/1‑140 (MQ=255)

                                                                                      tCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGt                                                >  1:962618/1‑140 (MQ=255)

                                                                                      tCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGt                                                >  1:198966/1‑140 (MQ=255)

                                                                                      tCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGt                                                >  2:178862/1‑140 (MQ=255)

                                                                                      tCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGt                                                >  1:1190187/1‑140 (MQ=255)

                                                                                       cGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTc                                               <  1:178862/140‑1 (MQ=255)

                                                                                       cGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTc                                               <  2:176766/140‑1 (MQ=255)

                                                                                       cGTAATTAATAGATAATTCACGACGAGAGTGATCAACTTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTc                                               <  1:932642/140‑1 (MQ=255)

                                                                                               aTAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGGCATGACCGCTTCAATAGGAAAGGGTTTAGTCACATAatc                                       >  2:489733/1‑140 (MQ=255)

                                                                                                   aTAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAAtcatca                                   >  1:230235/1‑140 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATGAACCTGAAAC‑GGGGGGGCCGACATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               <  2:582305/140‑1 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCTCCATCACCGCTTAAATGTGAAACGGTTTAGTCACATAATCATCAGCAc                               >  2:485146/1‑140 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTcaca                                            <  2:1853691/127‑1 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTcaca                                            >  1:1853691/1‑127 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               >  2:265509/1‑140 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               >  2:1561291/1‑140 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               >  2:1444398/1‑140 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               >  2:1420916/1‑140 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               >  2:60784/1‑140 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               <  1:265509/140‑1 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               <  1:1795760/140‑1 (MQ=255)

                                                                                                       ttCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCATCAATATTAAAGGGATTAGTCGCATAATCATCAGCAc                               >  1:582305/1‑140 (MQ=255)

                                                                                                       ttCACGGC‑‑GAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCg                             >  1:1471329/1‑140 (MQ=255)

                                                                                                       ttCACGGC‑‑GAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCg                             <  2:1471329/140‑1 (MQ=255)

                                                                                                        tCACGGCGAGAGAGAACAACCTAAACC‑GGCGGGGGCGCAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAcc                              <  1:516975/140‑1 (MQ=255)

                                                                                                         cACGGCGAGAGAGATCAGCCTGTAAC‑GGGGGTGGCAAAATGACCTGTGCAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCg                             <  2:683108/140‑1 (MQ=255)

                                                                                                         cACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCg                             <  2:962618/140‑1 (MQ=255)

                                                                                                         cACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCg                             <  1:1143207/140‑1 (MQ=255)

                                                                                                          aCGGCGAGAGAGATCTACCTGACAC‑CGGGCGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCgg                            <  1:489733/140‑1 (MQ=255)

                                                                                                          aCGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               >  1:1822638/1‑137 (MQ=255)

                                                                                                          aCGGCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCAc                               <  2:1822638/137‑1 (MQ=255)

                                                                                                            ggCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCa                          >  2:1584728/1‑140 (MQ=255)

                                                                                                            ggCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCa                          >  1:81716/1‑140 (MQ=255)

                                                                                                            ggCGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAACATGAAACCGTTAAGTCACATAGTCATCAGCACCGGCa                          >  1:683108/1‑140 (MQ=255)

                                                                                                              cGAGAGAGATCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACt                        >  2:1511775/1‑140 (MQ=255)

                                                                                                                      aTCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACTGTTGAGTAACATAATCATCAGCACCGGCACTTAATACtt                >  2:683989/1‑140 (MQ=255)

                                                                                                                      aTCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACtt                >  2:469129/1‑140 (MQ=255)

                                                                                                                      aTCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACtt                <  1:233549/140‑1 (MQ=255)

                                                                                                                      aTCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACtt                >  1:1659469/1‑140 (MQ=255)

                                                                                                                      aTCAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACtt                <  1:1511775/140‑1 (MQ=255)

                                                                                                                        cAACCTGAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACTTCg              >  2:1711594/1‑140 (MQ=255)

                                                                                                                              gAAAC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCAACAGTACAGGCACTGAATACTTCGACTTTg        >  1:879747/1‑140 (MQ=255)

                                                                                                                               aaaC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACTTCGACTTTGt       >  1:735981/1‑140 (MQ=255)

                                                                                                                                aaC‑GGGGGGGGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACTTCGACTTTGTc      >  1:442091/1‑140 (MQ=255)

TTAACGAATCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAAC‑GGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTACGCCGCATTAATGCCTGCATTCGCGCCATCACCTCTTCAATATGAAACGGTTTAGTCACATAATCATCAGCACCGGCACTTAATACTTCGACTTTGTCCTGC  >  NC_000913/1189925‑1190196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`