Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,261,174 T→C E234E (GAA→GAG prs ← ribose‑phosphate diphosphokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,261,1740TC98.9% 317.9 / ‑4.8 88E234E (GAA→GAGprsribose‑phosphate diphosphokinase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (38/49);  total (38/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

TCATCGCTCAGCGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCTTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGTCGATGATTGC  >  NC_000913/1261037‑1261308
                                                                                                                                         |                                                                                                                                      
tCATCGCTCAGCGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTc                                                                                                                                      >  1:1539305/1‑140 (MQ=255)
tCATCGCTCAGCGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTAAGTCGCGTACGCGAATGCACGTTTATCACCACGTTCTTTCAGAGCCTc                                                                                                                                      >  2:539498/1‑140 (MQ=255)
  aTCGCTCAGCGGAATGGTATCGCAGACAACGCCTTAATCGATTACAGACTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTcag                                                                                                                                    <  2:581325/140‑1 (MQ=255)
  aTCGCTCAGCGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTcag                                                                                                                                    <  2:1387463/140‑1 (MQ=255)
  aTCGCTCAGCGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTc                                                                                                                                      <  1:1734038/138‑1 (MQ=255)
  aTCGCTCAGCGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTc                                                                                                                                      >  2:1734038/1‑138 (MQ=255)
  aTCGCTCAGCGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTATTTCAGAGCCTcag                                                                                                                                    <  2:1158844/140‑1 (MQ=255)
     gCTCAGCGGAATGGTATCGCAGCCAACGACTCCATCAATAACAGAGTTGCGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTcagcag                                                                                                                                 <  2:645974/140‑1 (MQ=255)
           cGGAATGGTATCGCAGACAACGTCTTCATCATTTATAGACTTACGCAGATTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTac                                                                                                                           <  2:772937/140‑1 (MQ=255)
           cGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTac                                                                                                                           <  1:1225776/140‑1 (MQ=255)
            ggAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTaca                                                                                                                          <  2:1352547/140‑1 (MQ=255)
             gAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTacac                                                                                                                         <  1:89771/140‑1 (MQ=255)
                tGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAg                                                                                                                       >  1:1701881/1‑139 (MQ=255)
                tGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAg                                                                                                                       <  2:1701881/139‑1 (MQ=255)
                tGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGc                                                                                                                      >  2:1110163/1‑140 (MQ=255)
                 ggTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCCCGTTTTTTCAGAGCCTCAGCAGCTTTACACAGCg                                                                                                                     <  2:1904922/140‑1 (MQ=255)
                   tATCGCAGACAACGACTTCATCAACTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTa                                                                                                                   >  1:1821765/1‑140 (MQ=255)
                    aTCGCAGACAACGACTTGATCATTTACAGAGTTACTCAGCTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATCCACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTAc                                                                                                                  <  2:726209/140‑1 (MQ=255)
                     tCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTAcc                                                                                                                 >  2:1424808/1‑140 (MQ=255)
                         aGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCCCGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCa                                                                                                             <  1:1631657/140‑1 (MQ=255)
                         aGACAACGACTTCATAAATTACCGATTTATGCAGGTTCTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCa                                                                                                             <  1:539498/140‑1 (MQ=255)
                           aCAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTaca                                                                                                                          >  1:1236782/1‑125 (MQ=255)
                           aCAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTaca                                                                                                                          <  2:1236782/125‑1 (MQ=255)
                           aCAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgt                                                                                                           <  1:1110163/140‑1 (MQ=255)
                            caacaaCTTCATCCCTCCCTGTGTTACGCAGGTTCTTCGCCGCGTTCCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgtg                                                                                                          <  2:1767923/140‑1 (MQ=255)
                            cAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgtg                                                                                                          >  2:1763725/1‑140 (MQ=255)
                             aaCGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgtgt                                                                                                         >  1:1767923/1‑140 (MQ=255)
                             aaCGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgtgt                                                                                                         >  1:1653229/1‑140 (MQ=255)
                             aaCGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgt                                                                                                           <  1:1857473/138‑1 (MQ=255)
                             aaCGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgt                                                                                                           >  2:1125681/1‑138 (MQ=255)
                             aaCGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgt                                                                                                           <  1:1125681/138‑1 (MQ=255)
                             aaCGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgt                                                                                                           >  2:1857473/1‑138 (MQ=255)
                              aCGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTc                                                                                                        <  1:1536342/140‑1 (MQ=255)
                               cGACTTCATCAATTAGAGAGTTCCGCAGGCTGTTCGCTGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCTTCAGCAGCTTTACACAGCGTACCGCCAGTGTCg                                                                                                       <  1:576843/140‑1 (MQ=255)
                                  cTTCATCAATTACAGAGTTACGTAGTTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGatc                                                                                                    <  1:762768/140‑1 (MQ=255)
                                  cTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAg                                                                                                            >  2:1456889/1‑132 (MQ=255)
                                  cTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAg                                                                                                            <  1:1456889/132‑1 (MQ=255)
                                     catcaATTTCAGAGTTTAGCAGATTGTTCGCTGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGatcata                                                                                                 <  2:929551/140‑1 (MQ=255)
                                     catcaATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgtg                                                                                                          <  1:1731803/131‑1 (MQ=255)
                                     catcaATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAgtg                                                                                                          >  2:1731803/1‑131 (MQ=255)
                                       tcaATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAACAGCTTTACACTGCGTACCGCGAGTGTCGatcatatc                                                                                               >  1:679399/1‑140 (MQ=255)
                                        caATTACAGAGTTACGCTGGTTATTCGCCGCTTTGCCAGTGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGatcatatca                                                                                              <  2:702024/140‑1 (MQ=255)
                                          aTTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATatcatc                                                                                            <  1:290334/140‑1 (MQ=255)
                                          aTTACAGAGTTACGCAGGTTGTTCGCCGCCTTGCCAGGGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATatcatc                                                                                            <  1:650443/140‑1 (MQ=255)
                                              aagagTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGAcc                                                                                        <  1:1182631/139‑1 (MQ=255)
                                                gagTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCACCAGTGTCGATCATATCATCGACCAg                                                                                      >  1:1501240/1‑140 (MQ=255)
                                                 agTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACCCAGCGTACCGCGAGGGTCGATTATATCATCGACCAGt                                                                                     >  1:702024/1‑140 (MQ=255)
                                                 agTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGt                                                                                     >  1:1890297/1‑140 (MQ=255)
                                                    tACGCAGGTTGTTCGTCGCGTTACCTGAGTAGATCGGTTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACg                                                                                  <  1:881682/140‑1 (MQ=255)
                                                    tACGCAGGTTGTTCGCCCCGTTGCCAGAGAACATCTGGTGAGTCGCGTTCGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCACCAGTGTCGATCATATCATCGACCAGTACg                                                                                  <  2:583713/140‑1 (MQ=255)
                                                     aCGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCGAGTATCGATCATACCATCGACCAGTACGc                                                                                 >  1:859276/1‑140 (MQ=255)
                                                           gttgttCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCTCCAGTGTGGATAATGTCATCGGCCAGTACGCAGTCAc                                                                           >  1:489248/1‑140 (MQ=255)
                                                           gttgttCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTAACGCAAGTCTCGATCATGTCATCGACCAGTACGCAGTCAc                                                                           >  2:751862/1‑140 (MQ=255)
                                                             tgttCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCa                                                                            >  1:1676907/1‑137 (MQ=255)
                                                             tgttCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCa                                                                            <  2:1676907/137‑1 (MQ=255)
                                                                  gccgcGTTGCCAGAGTAGATCGAGTAAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGc                                                                    <  1:751862/140‑1 (MQ=255)
                                                                   ccgcGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCa                                                                   <  2:1821765/140‑1 (MQ=255)
                                                                     gcgTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAAc                                                                 >  2:1604234/1‑140 (MQ=255)
                                                                       gTTGCCAGAGAAGATCGGGTGATTCGCGTACGCAAATACGCGTTTAGCTCCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGt                                                               <  2:679399/140‑1 (MQ=255)
                                                                          gCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCAc                                                            <  2:1767775/140‑1 (MQ=255)
                                                                            cAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCg                                                          <  2:1890297/140‑1 (MQ=255)
                                                                             agagAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTGAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCga                                                         <  1:1763725/140‑1 (MQ=255)
                                                                               agaagaTCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCgatg                                                       <  2:1653229/140‑1 (MQ=255)
                                                                                   gaTCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGatat                                                   >  1:298426/1‑140 (MQ=255)
                                                                                      cGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCa                                                >  2:1138749/1‑140 (MQ=255)
                                                                                       gggTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCAt                                               <  2:481101/140‑1 (MQ=255)
                                                                                         gTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCa                                             >  2:1750163/1‑140 (MQ=255)
                                                                                           gAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACTCAGACACGACCTGCAACGTCACCGATGATATGCATCAcc                                           >  2:693825/1‑140 (MQ=255)
                                                                                           gAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCAcc                                           >  2:303983/1‑140 (MQ=255)
                                                                                            aGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACATGCTACGTCACCGATGATATGCATCACCt                                          >  1:875488/1‑140 (MQ=255)
                                                                                                 cgTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGAACGCAGTCTCGACCTGCAACGTCACTGATGATATGCATCACCTGTGaa                                     >  2:735451/1‑140 (MQ=255)
                                                                                                        aaaaACACGTTTAGCCAACCGTGTTTTCAGATCTTAAGCTGCTTTACAGAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCg                              <  2:859276/140‑1 (MQ=255)
                                                                                                        aaaTACACGTTTAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCg                              <  2:298426/140‑1 (MQ=255)
                                                                                                                 tttAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGgac                     <  1:1424808/140‑1 (MQ=255)
                                                                                                                  ttAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGgacg                    >  2:29395/1‑140 (MQ=255)
                                                                                                                   tAGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGgacga                   <  1:1567144/140‑1 (MQ=255)
                                                                                                                    aGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCgg                       >  1:1691849/1‑135 (MQ=255)
                                                                                                                    aGCACCACGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCgg                       <  2:1691849/135‑1 (MQ=255)
                                                                                                                      caccacGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGt                >  1:1088426/1‑140 (MQ=255)
                                                                                                                      caccacGTTCTTTCAGAGCCTCAGCAGCTTTACACAACGTACCGCCAGTGGCGATCATATCATCGACCAGTACGCAGGCACGACGTGCAACGGCACCGATGATATGCATCACCTGCGAAACGTGCGCACGCGAGCGACGt                >  2:155814/1‑140 (MQ=255)
                                                                                                                       accacGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGtt               <  2:1539305/140‑1 (MQ=255)
                                                                                                                          acGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGga                      <  2:1018835/130‑1 (MQ=255)
                                                                                                                          acGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGga                      >  1:1018835/1‑130 (MQ=255)
                                                                                                                          acGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGt            <  1:29395/140‑1 (MQ=255)
                                                                                                                          acGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGt            >  1:380551/1‑140 (MQ=255)
                                                                                                                          acGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGt            >  2:69041/1‑140 (MQ=255)
                                                                                                                           cGTTCTTTCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGTc           >  1:1130382/1‑140 (MQ=255)
                                                                                                                                 ttCAGAGCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGTCgatgat     <  1:1750163/140‑1 (MQ=255)
                                                                                                                                    agagCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGTCGATGATTGc  <  1:1604234/140‑1 (MQ=255)
                                                                                                                                    agagCCTCAGCAGCTTTACACAGCGTACCACCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGTCGATGATTGc  <  2:1501240/140‑1 (MQ=255)
                                                                                                                                      agCCTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGTCgatga      <  2:1895317/134‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                      
TCATCGCTCAGCGGAATGGTATCGCAGACAACGACTTCATCAATTACAGAGTTACGCAGGTTGTTCGCCGCGTTGCCAGAGAAGATCGGGTGAGTCGCGTACGCAAATACACGTTTAGCACCACGTTCTTTCAGAGCTTCAGCAGCTTTACACAGCGTACCGCCAGTGTCGATCATATCATCGACCAGTACGCAGTCACGACCTGCAACGTCACCGATGATATGCATCACCTGTGAAACGTTCGCACGCGGACGACGTTTGTCGATGATTGC  >  NC_000913/1261037‑1261308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: