Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,392,761	(A)8→9	coding (771/900 nt)	pgrR →	DNA‑binding transcriptional repressor PgrR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,392,753	1	.	A	100.0%	202.7 / NA	58	E255K (GAA→AAA)	pgrR	DNA‑binding transcriptional repressor PgrR
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base A (29/29);  total (29/29)

CGGTGGACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAG‑‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAGGTGC  >  NC_000913/1392620‑1392883                                                                                                                                       |                                                                                                                                     cgGTGGACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAG‑‑aa‑aaaa                                                                                                                              >  2:686951/1‑140 (MQ=255) cgGTGGACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCACGTCGAGCGGACTATTAAAG‑‑aa‑aaaa                                                                                                                              >  1:342716/1‑140 (MQ=255)  ggTGGACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAG‑‑aa‑aaaaa                                                                                                                             >  2:387780/1‑140 (MQ=255)    tGGACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTAACTTATGATCAGGTTGAGCGGGATATTAAAG‑‑aa‑aaaaaaa                                                                                                                           >  2:291302/1‑139 (MQ=255)      gACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAG‑‑aa‑aaaaaaact                                                                                                                         <  1:599187/140‑4 (MQ=255)           gAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATAc                                                                                                                     <  1:570941/140‑1 (MQ=255)                 cGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCCACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGttt                                                                                                               <  2:527124/140‑1 (MQ=255)                           tGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAAtt                                                                                                     <  2:673467/140‑1 (MQ=255)                                    aGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGa                                                                                            >  1:395985/1‑140 (MQ=255)                                         ttACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTGCCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTAc                                                                                       <  2:675942/140‑1 (MQ=255)                                          tACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTAcc                                                                                      <  1:686951/140‑1 (MQ=255)                                                    gATAGACCTGATCATTGATGCTACAATTGATGGGCCTGGTTTGGCGTAACTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCAc                                                                            <  2:252642/140‑1 (MQ=255)                                                    gATAGACCTGATCATCGATGCTGCACTTGGTGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCAc                                                                            <  1:309385/140‑1 (MQ=255)                                                      tAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCt                                                                          <  2:68711/140‑1 (MQ=255)                                                      tAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCt                                                                          >  2:398999/1‑140 (MQ=255)                                                         aCCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGtt                                                                                 <  1:65783/130‑1 (MQ=255)                                                         aCCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGtt                                                                                 >  2:65783/1‑130 (MQ=255)                                                         aCCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTa                                                                       <  2:11919/140‑1 (MQ=255)                                                         aCCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTa                                                                       >  2:519529/1‑140 (MQ=255)                                                         aCCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTa                                                                       <  1:387780/140‑1 (MQ=255)                                                         aCCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTa                                                                       >  2:412277/1‑140 (MQ=255)                                                           cTGATCATTGATGCTGCAATTGATGGGCATGGATTAGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACt                                                                     >  1:15383/1‑140 (MQ=255)                                                              aTCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACGAGATTTCCCCGGTTATCACCTGTACTATc                                                                  >  1:252642/1‑140 (MQ=255)                                                              aTCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATc                                                                  >  1:446796/1‑140 (MQ=255)                                                              aTCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATc                                                                  >  2:520193/1‑140 (MQ=255)                                                              aTCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATc                                                                  >  1:444369/1‑140 (MQ=255)                                                              aTCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGAGTTCCCCGGTTATCACCTGTACTATc                                                                  >  1:328126/1‑140 (MQ=255)                                                                   tGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGAAAA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCcaca                                                              >  2:407444/1‑140 (MQ=255)                                                                   tGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCacac                                                             <  1:519529/140‑1 (MQ=255)                                                                   tGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAACGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCacac                                                             >  2:170997/1‑140 (MQ=255)                                                                             aTTGATGGGCATGGATTGGCGTTTCTACCTTCTGATCAGGTTGAGCGGCCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATg                                                   <  2:233388/140‑1 (MQ=255)                                                                                     gCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGGTATGACCAGTACTATCCACACAGTCGACATGCTGGCTCg                                           >  2:231453/1‑140 (MQ=255)                                                                                        tGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCCCCTGTACTATCGACTCCGTCGTCATGCTGGCTCGGCa                                        >  1:348223/1‑140 (MQ=255)                                                                                          gATTGGCGGATCTACCTTATGATCAGGTTGGGCGGACTAGTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCAtt                                      <  2:348223/140‑1 (MQ=255)                                                                                              gacagaTCTACCTTATGATCAGCTTCAGCGGGCTATTTAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCa                                  <  1:224322/135‑1 (MQ=255)                                                                                               gCGTATCTACCTTATTATCAGGATGCGCGTGCTATTATAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCat                                 <  1:194628/140‑1 (MQ=255)                                                                                               gCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCat                                 <  2:66326/140‑1 (MQ=255)                                                                                                   aTCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCattatt                             <  1:398999/140‑1 (MQ=255)                                                                                                         cTTATGATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGACGACATGCTGGCTCGGCATTCTCATTATTTataga                       >  2:319617/1‑140 (MQ=255)                                                                                                              gATCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATGCACACCGTCGACGTGCCGGCTCGGCATTCTAATTATTTatagactgtc                  >  2:224322/1‑135 (MQ=255)                                                                                                              gATCAGGTTGAACGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGc                  <  1:170997/140‑1 (MQ=255)                                                                                                                tCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                <  2:90839/140‑1 (MQ=255)                                                                                                                tCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                <  1:543431/140‑1 (MQ=255)                                                                                                                tCAGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTAGGCATTCTCATTATTTATAGATAGGCTg                >  2:588889/1‑140 (MQ=255)                                                                                                                tCAGGTTGAGCGGGCGATTAAAT‑‑AACAAAAAACTGATGCGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                <  1:347912/140‑1 (MQ=255)                                                                                                                tCAGGTTGAGCGGGCAATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                <  1:291302/140‑1 (MQ=255)                                                                                                                  aGGTTGAGCGGGCTATTAAAGAAAA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGa               >  2:36526/1‑140 (MQ=255)                                                                                                                  aGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                <  2:725892/138‑1 (MQ=255)                                                                                                                  aGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                >  1:725892/1‑138 (MQ=255)                                                                                                                  aGGTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCGGGCGCGGCATTCTCATTATTTATAGATAGGCTGaa              >  2:278630/1‑140 (MQ=255)                                                                                                                   ggTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                >  2:645311/1‑137 (MQ=255)                                                                                                                   ggTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                <  1:645311/137‑1 (MQ=255)                                                                                                                   ggTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAg             >  1:648127/1‑140 (MQ=255)                                                                                                                    gTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATCCTGGCTCCGCATTCTCGTTATATATAGATAGGCTGAAGt            >  2:247343/1‑140 (MQ=255)                                                                                                                    gTTGAGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCAAACCAGATTTACCCGGTTATCACCTGTACTATCCACACTGTCGACATCCTGTCCCCGCATTCTCATTATTATTAGATACGCTGAAGt            >  2:336675/1‑140 (MQ=255)                                                                                                                      tGAGCGGGGTATTAAAGT‑AA‑AAGAAACTGATACTTGTTTAGGATAAATACACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGtat          <  2:328126/140‑1 (MQ=255)                                                                                                                        aGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                >  1:33863/1‑132 (MQ=255)                                                                                                                        aGCGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTg                <  2:33863/132‑1 (MQ=255)                                                                                                                          cGGGCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAg      >  1:40393/1‑140 (MQ=255)                                                                                                                           gggCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAgg     <  2:530183/140‑1 (MQ=255)                                                                                                                             gCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAgg     <  2:153834/138‑1 (MQ=255)                                                                                                                             gCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAgg     >  1:153834/1‑138 (MQ=255)                                                                                                                             gCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAGGTg   <  2:444369/140‑1 (MQ=255)                                                                                                                             gCTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAGGTg   <  2:40393/140‑1 (MQ=255)                                                                                                                              cTATTAAAGA‑AA‑AAAAAACTGATACGTGTTTTGGATAAATCCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAGGTGc  >  1:562096/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                     CGGTGGACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAG‑‑AA‑AAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAGGTGC  >  NC_000913/1392620‑1392883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑