| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,337,101 | (C)6→9 | coding (156/294 nt) | mlaB ← | intermembrane phospholipid transport system protein MlaB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3337095 | 4 (0.100) | 40 (0.930) +CCC |
34/258 | 0.2 | 90.9% | coding (162/294 nt) | mlaB | intermembrane phospholipid transport system protein MlaB |
| ? | NC_000913 | 3337096 = | 4 (0.090) | coding (161/294 nt) | mlaB | intermembrane phospholipid transport system protein MlaB | |||||
AGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTGCCCTGCTTTTTCGCCAGATCGATAAGATGGAGCAGCAGTGCCAGT‑CCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTG > NC_000913/3336981‑3337232 | gcaggcaaattatacaatttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGaca < 1:472508‑M2/24‑1 (MQ=255) ggcaaattatacaatttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACgg > 2:642055‑M2/114‑140 (MQ=255) ggcaaattatacaatttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACgg > 2:72374‑M2/114‑140 (MQ=255) aaattatacaatttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTa > 2:478150‑M2/111‑140 (MQ=255) ttatacaatttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGa < 2:448370‑M2/33‑1 (MQ=255) aatttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATg < 2:93765‑M2/39‑1 (MQ=255) tttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGa < 2:732587‑M2/33‑1 (MQ=255) tttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGa > 1:732587‑M2/100‑132 (MQ=255) tttcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCa > 2:512407‑M2/100‑140 (MQ=255) tcgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAgg < 1:642055‑M2/43‑1 (MQ=255) tCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTGCCCTGCTTTTTCGCCAGATCGATAAGATGGAGCAGCAGTGCCAGT‑CCCTCCCAGTATCCATGCGGGATACACGGTTAAGATCGATGCAgg > 1:201124/1‑140 (MQ=255) cgccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccggtccCCC‑CTC‑GTATCCGCGCGGGAGACACGTCTAAGATCGATGCAGGt > 2:290015‑M2/97‑140 (MQ=255) gccagggtatacactttttcgtgtaccccctcaagtgtctcattgttgtcctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTa < 2:201124‑M2/45‑1 (MQ=255) ccagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTaa > 1:616577‑M2/95‑140 (MQ=255) cagggtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAAt < 1:676370‑M2/47‑1 (MQ=255) gtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATcccc > 2:90857‑M2/90‑140 (MQ=255) gtatacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATcccc < 2:89626‑M2/51‑1 (MQ=255) atacactttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCtt < 1:72374‑M2/53‑1 (MQ=255) acacTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTGCCCTGCTTTTTCGCCAGATCGATAAGATGGAGCAGCAGTGCCAGTCCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCAc > 1:25611/1‑140 (MQ=255) ttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATcccc > 1:113461‑M2/81‑131 (MQ=255) ttgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATcccc < 2:113461‑M2/51‑1 (MQ=255) tgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtcccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCt > 2:148404‑M2/81‑140 (MQ=255) tgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACCCGGCTAATATCTATACAGGTAATCCCCTTCACCGCtt > 1:280268‑M2/80‑140 (MQ=255) tgtcgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCtt > 2:53881‑M2/80‑140 (MQ=255) tGTCGTTTACCCCCTGAAGCGTCACATTGTTGCCCTGCTTTTTCGCCAGATCGATAAGATGGAGCAGCAGTGCCAGTCCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTc > 2:539291/1‑140 (MQ=255) cgtttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCt < 1:430060‑M2/64‑1 (MQ=255) tttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCa < 1:520223‑M2/55‑1 (MQ=255) tttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCa > 2:520223‑M2/75‑129 (MQ=255) ttaccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCAc > 1:365412‑M2/74‑140 (MQ=255) ccccctgaagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtcccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGc < 1:148404‑M2/69‑1 (MQ=255) aagcgtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCa > 1:593115‑M2/64‑140 (MQ=255) gtcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGc < 2:593115‑M2/81‑1 (MQ=255) tcacattgttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCg > 1:661938‑M2/59‑140 (MQ=255) gttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCaa < 1:90857‑M2/89‑1 (MQ=255) ttgccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCaaa < 2:661938‑M2/90‑1 (MQ=255) gccctgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAAc > 2:3966‑M2/49‑140 (MQ=255) tgctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCATGCACTTCCCAAAGCGGTAGCAAAACGTcc > 1:326196‑M2/45‑140 (MQ=255) ctttttcgccagatcgataagatggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTg > 2:716360‑M2/43‑140 (MQ=255) ggagcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCa > 2:591893‑M2/20‑140 (MQ=255) agcagcagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGc > 1:505‑M2/18‑140 (MQ=255) cagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCACAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCgt > 2:38798‑M2/13‑137 (MQ=255) cagtgccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCGCCGGATAACGCCAGCgt < 1:38798‑M2/125‑1 (MQ=255) cagtgccagcccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCACAACATCCTGATCCAGCGCTCCAAATAACGCCAGCGTGTc > 2:332062‑M2/13‑140 (MQ=255) cagTGCCAGTCCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCa < 2:25611/140‑1 (MQ=255) ccagtccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCg > 2:514482‑M2/8‑140 (MQ=255) tccCCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTg > 2:454507‑M2/4‑140 (MQ=255) | AGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTGCCCTGCTTTTTCGCCAGATCGATAAGATGGAGCAGCAGTGCCAGT‑CCC‑CCC‑GTATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTG > NC_000913/3336981‑3337232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |