| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,860,891 | C→T | V148I (GTT→ATT) | ydjL ← | putative zinc‑binding dehydrogenase YdjL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,860,891 | 0 | C | T | 97.8% | 153.6 / NA | 46 | V148I (GTT→ATT) | ydjL | putative zinc‑binding dehydrogenase YdjL |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (23/22); minor base G (1/0); total (24/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGAGAACAGCCCGAGTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACA > NC_000913/1860763‑1861022 | ggAGAACAGCCCGAGTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGa < 1:138931/140‑1 (MQ=255) aaCAGCCCGAGTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTc > 2:366125/1‑140 (MQ=255) aGCCCGAGTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCca > 1:484738/1‑140 (MQ=255) aGCCCGAGTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCca < 1:366125/140‑1 (MQ=255) cccGAGTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCcaca > 2:431059/1‑140 (MQ=255) gTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCa < 2:543663/140‑1 (MQ=255) gTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCa > 1:696083/1‑140 (MQ=255) gTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTACTCATAATCAAGACCATCAGGGATTTCCCACAACGCa > 1:291903/1‑140 (MQ=255) aTGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAAtttt > 1:173107/1‑140 (MQ=255) ggaaggaaTTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAg < 2:584715/140‑1 (MQ=255) ggaaggaaTTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAg > 1:616037/1‑140 (MQ=255) ggaaggaaTTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAg > 2:361620/1‑140 (MQ=255) gaaggaaTTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATCTCCCACAAGGCACGACTATGAATTTTGAGAATTTCACCAGGAACCAGa > 2:216949/1‑140 (MQ=255) aaggaaTTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGAc > 2:605461/1‑140 (MQ=255) cgcgATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAaccac < 1:413977/140‑1 (MQ=255) cgcgATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAaccac < 1:605461/140‑1 (MQ=255) gcgATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAaccacc < 1:128205/140‑1 (MQ=255) caggATTTGTAGGCATTGCAGATAGGGTCAAATACGGCTTCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcc < 2:310456/138‑1 (MQ=255) aTGGATTTGTAGGCATTGCAGAGAGGGTCAAGTACGGCTCCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcc < 2:291903/140‑1 (MQ=255) aTGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcc < 2:484738/140‑1 (MQ=255) ggATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcccc < 2:616037/140‑1 (MQ=255) ggATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcccc < 1:701542/140‑1 (MQ=255) ggATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGcccc < 2:696083/140‑1 (MQ=255) tttGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAgg < 2:173107/140‑1 (MQ=255) tttGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAgg < 2:563535/140‑1 (MQ=255) aTTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGtattattat > 1:637830/1‑140 (MQ=255) aTTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGtattattat > 2:460792/1‑140 (MQ=255) aTTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTCGGATAATCCACCGTCCCAGGtattatctg > 1:310456/1‑137 (MQ=255) cAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGAAACCAGACAATAATAGAAAAAACCAACGCCGCAGGTATTATTATCCAg > 2:330234/1‑140 (MQ=255) aGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCaa > 2:131052/1‑140 (MQ=255) aGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCaa > 2:690558/1‑140 (MQ=255) aGGGTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCaa > 1:535696/1‑140 (MQ=255) gTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTTCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGt > 1:81894/1‑140 (MQ=255) gTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGt > 2:369274/1‑140 (MQ=255) gTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGt > 2:660693/1‑140 (MQ=255) gTCAAGTACGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGt > 1:539647/1‑140 (MQ=255) aCGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACttt < 2:81894/140‑1 (MQ=255) aCGGCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACttt < 2:539647/140‑1 (MQ=255) ggCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACttttt < 1:369274/140‑1 (MQ=255) gCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGAcc < 2:78049/125‑1 (MQ=255) gCTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGAcc > 1:78049/1‑125 (MQ=255) cTGCGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCt > 2:94104/1‑140 (MQ=255) cGTCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTa < 1:690558/140‑1 (MQ=255) tCCTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTaca > 1:377409/1‑140 (MQ=255) ccTCATAATCAATTCCATCAGGGATGTCCCCCAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATAGTTGGAAAAACGGCCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTacaa < 2:79579/140‑1 (MQ=255) ccTCATAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTacaa < 2:637830/140‑1 (MQ=255) aTAATCAATACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAAcaca < 2:535696/140‑1 (MQ=255) | GGAGAACAGCCCGAGTGGGCCAGTGCCGATGACGACCACATCCTGACCAGGAAGGAATTTCGATTGCTGCGCGATGGATTTGTAGGCATTACAGATAGGGTCAAGTACGGCTGCGTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACA > NC_000913/1860763‑1861022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |