| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,046,898 | T→C | V654A (GTG→GCG) | yeeJ → | inverse autotransporter adhesin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,046,898 | 0 | T | C | 98.2% | 193.8 / NA | 54 | V654A (GTG→GCG) | yeeJ | inverse autotransporter adhesin |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (27/26); minor base G (1/0); total (28/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGCCACAGCTGAATGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGTGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAG > NC_000913/2046765‑2047034 | aTGCCACAGCTGAATGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGt > 1:365956/1‑140 (MQ=255)aTGCCACAGCTGAATGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGt > 2:508413/1‑140 (MQ=255) aaTGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTgagaga < 1:161662/140‑1 (MQ=255) tgtgGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGaaa > 1:68244/1‑140 (MQ=255) tgtgGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGaaa > 2:125471/1‑140 (MQ=255) tgGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAAt > 1:412023/1‑140 (MQ=255) gCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAAcc > 2:397843/1‑140 (MQ=255) gCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAAcc > 2:536391/1‑140 (MQ=255) gCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCATCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAAcc > 1:172549/1‑140 (MQ=255) gCTAAAGCCCCCGCCGTGGGGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAAcc > 1:21826/1‑140 (MQ=255) aaGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGGGACGGTAAAACTGAGAGATGATAATGACAAACCTGtt > 1:309069/1‑140 (MQ=255) ccccGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAgg < 2:109101/140‑1 (MQ=255) ccgccgTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGaa < 1:508413/140‑1 (MQ=255) gccgTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACa < 2:163218/140‑1 (MQ=255) cgTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACaaa < 2:21826/140‑1 (MQ=255) cATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGa > 1:619181/1‑140 (MQ=255) cATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGa > 1:124025/1‑140 (MQ=255) tttCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAAt > 1:58655/1‑140 (MQ=255) tCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATaa < 1:365155/140‑1 (MQ=255) cTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAAc > 2:499215/1‑140 (MQ=255) gTTTCGTCATCCCGAACTCACTCGTCAATTATGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGc > 1:508458/1‑140 (MQ=255) tCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTTTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGt < 2:715099/140‑1 (MQ=255) cGAACTCACTCGTCAATTAAGATTGATAAAGACCGTTTTCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGa < 1:300439/140‑1 (MQ=255) gAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGAc < 2:124025/140‑1 (MQ=255) actcactcGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACaa > 2:114797/1‑140 (MQ=255) ctcactcGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAAc < 1:125471/140‑1 (MQ=255) cactcGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGt < 1:101559/140‑1 (MQ=255) ctcGTCAATTAAGATTGATAAGCACGGTTCTCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGa < 1:237763/140‑1 (MQ=255) agcAATTAAGATTGATAAGGACCGTTATCTCGCCGCCAAACCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAAc < 2:230679/138‑1 (MQ=255) tCAATTAAGATTGATAAGGACAGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAAcc > 2:637578/1‑140 (MQ=255) cAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGTATCGACAACGTGAAACCa < 2:75973/140‑1 (MQ=255) cAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCa < 1:438961/140‑1 (MQ=255) cAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCa < 2:412023/140‑1 (MQ=255) aTTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAgg > 2:63984/1‑140 (MQ=255) aaGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGt < 1:499215/140‑1 (MQ=255) gATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCa < 2:58655/140‑1 (MQ=255) aTTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCAc > 2:517200/1‑140 (MQ=255) gATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGAATCTACGACGTGAAACCAGGAGTCACtct > 1:230679/1‑138 (MQ=255) aTAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACa > 2:712322/1‑140 (MQ=255) tAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAg > 2:169021/1‑140 (MQ=255) ttATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGgaaag > 2:371303/1‑140 (MQ=255) ttATCTCTCCGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGgaaag > 2:624181/1‑140 (MQ=255) ccGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCa > 1:642269/1‑140 (MQ=255) ccGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCa > 1:703138/1‑140 (MQ=255) cGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAg < 1:568364/140‑1 (MQ=255) cGGCAATCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAg < 1:371303/140‑1 (MQ=255) aaTCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATgg < 2:365956/140‑1 (MQ=255) aaTCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATgg < 1:536391/140‑1 (MQ=255) aTCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGc < 1:397843/140‑1 (MQ=255) tCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCATTACAGAGTGGAAACAAACCGCAGATGGCg > 1:195941/1‑140 (MQ=255) tCCTATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCg > 1:669942/1‑140 (MQ=255) tATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCt < 2:68244/140‑1 (MQ=255) tATCGAGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCt < 1:114797/140‑1 (MQ=255) aGGCGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAg < 2:642269/140‑1 (MQ=255) | ATGCCACAGCTGAATGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGTGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAG > NC_000913/2046765‑2047034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |