Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	317,251	T→C	intergenic (‑115/+475)	ykgA ← / ← rclC	putative DNA‑binding transcriptional regulator YkgA/reactive chlorine species resistance protein C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	317,251	0	T	C	100.0%	254.1 / NA	71	intergenic (‑115/+475)	ykgA/rclC	putative DNA‑binding transcriptional regulator YkgA/reactive chlorine species resistance protein C
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/32);  total (39/32)

TCTTCTGCCTGATCATCTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGTCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCATGCCTAATGGAGGGACTGACAGTG  >  NC_000913/317121‑317387                                                                                                                                   |                                                                                                                                         tcttctGCCTGATCATCTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGaaaa                                                                                                                                 >  1:688899/1‑140 (MQ=255)   ttctGCCTGATCATCTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAATAGCACTGGTAGAGTCTGCTTCGTTGCCCCCGAAAATa                                                                                                                               >  1:216444/1‑140 (MQ=255)      tGCCTGATCATCTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATagag                                                                                                                            >  2:25661/1‑140 (MQ=255)      tGCCTGATCATCTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATagag                                                                                                                            >  2:645000/1‑140 (MQ=255)      tGCCTGATCATCTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATagag                                                                                                                            >  2:481400/1‑140 (MQ=255)      tGCCTGATCATCTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATagag                                                                                                                            <  2:535514/140‑1 (MQ=255)            atcatcTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGttt                                                                                                                      <  1:595084/140‑1 (MQ=255)            atcatcTCATTCTCCGTGAATTTTTTGTCATTTCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGttt                                                                                                                      <  2:326102/140‑1 (MQ=255)            atcatcTCATTCTCCGTGAATTGTTTGTCATTTCGTACAGTTTCGTTACACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGttt                                                                                                                      <  2:216444/140‑1 (MQ=255)                  tcATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTcc                                                                                                                >  1:497734/1‑140 (MQ=255)                  tcATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTcc                                                                                                                >  2:128676/1‑140 (MQ=255)                  tcATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTcc                                                                                                                <  1:25661/140‑1 (MQ=255)                      tctcCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACa                                                                                                            >  1:393911/1‑140 (MQ=255)                          cGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACattat                                                                                                        >  2:642163/1‑140 (MQ=255)                            ttAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACAttatta                                                                                                      >  1:622249/1‑140 (MQ=255)                              aaTTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAAt                                                                                                    >  2:320182/1‑140 (MQ=255)                              aaTTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAAt                                                                                                    >  2:565648/1‑140 (MQ=255)                              aaTTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAAt                                                                                                    >  2:444021/1‑140 (MQ=255)                                      gTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAAttttt                                                                                            >  2:406507/1‑140 (MQ=255)                                      gTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAAttttt                                                                                            >  1:453793/1‑140 (MQ=255)                                          tatCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCa                                                                                        <  2:393911/140‑1 (MQ=255)                                           atCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGc                                                                                         >  1:698382/1‑138 (MQ=255)                                           atCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGc                                                                                         <  2:698382/138‑1 (MQ=255)                                             cGCACATTTTAGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATaa                                                                                     >  1:68491/1‑140 (MQ=255)                                               cacaTTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGt                                                                                   >  2:164664/1‑140 (MQ=255)                                                 caTTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAGTAGAGAGGATTCGGTCATACATTATCAATGGATTTTTTGCATAAGTGa                                                                                 >  2:202838/1‑140 (MQ=255)                                                       cGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCaa                                                                           >  2:146105/1‑140 (MQ=255)                                                       cGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCaa                                                                           <  2:654341/140‑1 (MQ=255)                                                          tataCCCTGGGCCCTTAGTGTATCAAAAAGAGCAAGGTCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAAt                                                                        <  1:321265/140‑1 (MQ=255)                                                          tataCCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAAt                                                                        <  1:565648/140‑1 (MQ=255)                                                          tataCCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAAt                                                                        <  1:444021/140‑1 (MQ=255)                                                          tataCCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAAt                                                                        <  1:320182/140‑1 (MQ=255)                                                            taCCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATcc                                                                      <  1:491096/140‑1 (MQ=255)                                                            taCCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATcc                                                                      >  1:134651/1‑140 (MQ=255)                                                            taCCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACAGTATTAATAAATATTGTGCATAGGTGATATCAAAATcc                                                                      >  1:205192/1‑140 (MQ=255)                                                              cccTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCaa                                                                           <  2:387891/133‑1 (MQ=255)                                                              cccTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCaa                                                                           >  1:387891/1‑133 (MQ=255)                                                              cccTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCcac                                                                    >  2:414160/1‑140 (MQ=255)                                                                 tGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAAt                                                                        >  1:586960/1‑133 (MQ=255)                                                                 tGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAAt                                                                        <  2:586960/133‑1 (MQ=255)                                                                 tGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACAta                                                                 <  2:134651/140‑1 (MQ=255)                                                                 tGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACAta                                                                 >  2:76380/1‑140 (MQ=255)                                                                   ggCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACAta                                                                 <  1:27107/138‑1 (MQ=255)                                                                   ggCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACAta                                                                 >  2:27107/1‑138 (MQ=255)                                                                      ccTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATactact                                                            <  1:645000/140‑1 (MQ=255)                                                                        tAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACttt                                                          >  1:146508/1‑140 (MQ=255)                                                                        tAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACttt                                                          >  2:453824/1‑140 (MQ=255)                                                                         aaGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTg                                                         <  1:164664/140‑1 (MQ=255)                                                                         aaGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTg                                                         >  2:631373/1‑140 (MQ=255)                                                                         aaGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTg                                                         >  2:623704/1‑140 (MQ=255)                                                                              tATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGtt                                                    <  1:80364/140‑1 (MQ=255)                                                                               aTCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTa                                                   <  2:547216/140‑1 (MQ=255)                                                                               aTCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTa                                                   <  1:128676/140‑1 (MQ=255)                                                                               aTCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTa                                                   <  2:489881/140‑1 (MQ=255)                                                                               aTCAAAAATAGCAAGCGCGAAGACACAAGTACTGGTACCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTa                                                   <  1:202838/140‑1 (MQ=255)                                                                                tCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTAc                                                  >  2:723113/1‑140 (MQ=255)                                                                                   aaaaTAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGtt                                               <  1:723113/140‑1 (MQ=255)                                                                                    aaaTAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGttt                                              <  1:76380/140‑1 (MQ=255)                                                                                    aaaTAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGttt                                              <  2:688899/140‑1 (MQ=255)                                                                                                      cAAAAGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGtt                            <  1:631373/140‑1 (MQ=255)                                                                                                        aaaGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCa                          >  2:581010/1‑140 (MQ=255)                                                                                                         aaGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCAt                         <  2:453793/140‑1 (MQ=255)                                                                                                         aaGCACTGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCAt                         <  2:68491/140‑1 (MQ=255)                                                                                                               tGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGGGGTTACGATTTGACATAGACTGATTGTTCATGCCTaa                   >  1:348109/1‑140 (MQ=255)                                                                                                               tGGTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCATGCCTaa                   >  2:682449/1‑140 (MQ=255)                                                                                                                 gTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCATGCCTAATg                 <  2:487175/140‑1 (MQ=255)                                                                                                                 gTAGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCATGCCTAATg                 >  1:10721/1‑140 (MQ=255)                                                                                                                   aGCGTCTGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCATGCCTAATGGa               <  1:97717/140‑1 (MQ=255)                                                                                                                         tGCTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCATGCCTAATGGAGGGACt         >  2:511360/1‑140 (MQ=255)                                                                                                                           cTTCGTTGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTTGCGTAGATTCATTGTTCATGCCTAATGGAGGGACTGa       >  1:258402/1‑140 (MQ=255)                                                                                                                                ttGCCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTTGACTCATTGTTCATGCCTAATCGAGGGACTGACAGTg  >  1:309775/1‑140 (MQ=255)                                                                                                                                   |                                                                                                                                         TCTTCTGCCTGATCATCTCATTCTCCGTTAATTCTTTGTCATATCGCACATTTTCGTTATACCCTGGGCCCTAAGTGTATCAAAAATAGCAAGGGCGAAGGCAAAAGCACTGGTAGCGTCTGCTTCGTTGTCCCCGAAAATAGAGAGGTTTCAGTCCTACATTATTAATGAATTTTTTGCATAAGTGATATCAAAATCCACATACTACTTTGAGGTTACGTTTTAACGTAGACTCATTGTTCATGCCTAATGGAGGGACTGACAGTG  >  NC_000913/317121‑317387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑