Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	737,376	A→G	pseudogene (477/1062 nt)	ybfL →	putative transposase YbfL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	737,376	0	A	G	100.0%	192.0 / NA	70	pseudogene (477/1062 nt)	ybfL	putative transposase YbfL
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (36/34);  total (36/34)

TCATCGGGCAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATGAGTGAAAAGAG  >  NC_000913/737240‑737510                                                                                                                                         |                                                                                                                                       tCATCGGGCAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATGTTAAAGGAAAAATCATAACAACTGAAGCGTTGGGTTGCCAGAGAGATCTTGCAGAGAAGATGCaa                                                                                                                                     >  2:215488/1‑140 (MQ=11)      gggCAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAAGTGATGCGAGGGGTTGCGAGAAAGATTTTGCAGAGAAGATGCAAAAACa                                                                                                                                >  2:245363/1‑140 (MQ=11)      gggCAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACa                                                                                                                                >  1:528837/1‑140 (MQ=37)        gCAGATCAAGACGGATACGAAAACCAATGAGTTCACAGCAATCCCTGATCTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAgg                                                                                                                              <  2:194206/140‑1 (MQ=11)        gCAGATCAAGACGGATAAGAAAGCCTATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAgg                                                                                                                              <  1:258619/140‑1 (MQ=255)           gATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAg                                                                                                                           <  1:480927/140‑1 (MQ=25)                      aTAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCaaaaa                                                                                                                                  <  2:369059/122‑1 (MQ=25)                      aTAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCaaaaa                                                                                                                                  >  1:369059/1‑122 (MQ=25)                      aTAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGAttattta                                                                                                                >  2:362164/1‑140 (MQ=21)                       tAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGAttatttat                                                                                                               >  1:655082/1‑140 (MQ=21)                          gAAATCCAATGAGATCACAGCTTTCCCTGAAGTTCATAAAATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCg                                                                                                            <  2:281809/140‑1 (MQ=11)                              tCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGt                                                                                                        <  2:585327/140‑1 (MQ=21)                                cAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGTAGAAGCAAAAACAGGGAGGTGATTATTTATTCGCTGTaa                                                                                                      >  2:251418/1‑140 (MQ=255)                                cAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTaa                                                                                                      >  2:165168/1‑140 (MQ=25)                                         cacaGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAAcc                                                                                             >  2:576667/1‑140 (MQ=21)                                         cacaGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAAcc                                                                                             >  2:661473/1‑140 (MQ=25)                                         cacaGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAAcc                                                                                             >  1:527296/1‑140 (MQ=37)                                              cTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAgggg                                                                                        <  2:527296/140‑1 (MQ=21)                                              cTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAgggg                                                                                        <  1:590409/140‑1 (MQ=21)                                              cTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAgggg                                                                                        <  1:391010/140‑1 (MQ=21)                                              cTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAgggg                                                                                        <  2:121666/140‑1 (MQ=21)                                               tATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGggc                                                                                       >  1:169136/1‑140 (MQ=25)                                                 tCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGggcgg                                                                                     >  1:84950/1‑140 (MQ=21)                                                  cccTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGggcggc                                                                                    <  1:165168/140‑1 (MQ=21)                                                  cccTGAACTTCTTAACACGCTGTATATTAAAGGAAAAATGATCACAACAGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGggcggc                                                                                    <  2:312620/140‑1 (MQ=11)                                                   ccTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAGACAGGGAGGTGATTATCTATTCGCTTTAAACGGAAACCAGGGGCGGCt                                                                                   >  2:223698/1‑140 (MQ=11)                                                      gAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACCGGGAGGTGGTTACTTACTCGCTGTACAAGGGAACCAGGGGCGGCTtaa                                                                                >  2:198922/1‑140 (MQ=11)                                                      gAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaa                                                                                >  2:535303/1‑140 (MQ=21)                                                      gAACTTCTTAACATGCTAGATAGTAAAGGAAAAATCATCCCAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaa                                                                                <  2:303454/140‑1 (MQ=255)                                                            cttAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGggcgg                                                                                     <  1:727481/129‑1 (MQ=18)                                                            cttAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGggcgg                                                                                     >  2:727481/1‑129 (MQ=17)                                                              tAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCt                                                                        <  2:528837/140‑1 (MQ=21)                                                                 cATGCTGGATATTAAAGTAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGggcggc                                                                                    >  2:130591/1‑125 (MQ=12)                                                                 cATGCTGGATATTAAAGTAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGggcggc                                                                                    <  1:130591/125‑1 (MQ=18)                                                                    gCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAGAGGTAACCAGGGGCGGCGTAATAAAGCCTTTGAgg                                                                  >  2:279155/1‑140 (MQ=255)                                                                    gCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAgg                                                                  >  2:75837/1‑140 (MQ=21)                                                                    gCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAgg                                                                  >  2:556949/1‑140 (MQ=21)                                                                     cTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAAGCAGGGGCGGCTTAATAAAGCCTTTGAGGa                                                                 >  1:355715/1‑140 (MQ=21)                                                                      tGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTCTTCGCTGTAAAAGGAAACCAGGGGCAGCTTTATAAAGCCTTTGAGGaa                                                                >  2:286439/1‑140 (MQ=255)                                                                      tGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGaa                                                                >  2:416942/1‑140 (MQ=21)                                                                      tGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGaa                                                                >  2:462783/1‑140 (MQ=21)                                                                             tAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTc                                                         <  1:540120/140‑1 (MQ=25)                                                                                  gAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCACGGGAGGCGTAATAAAGCCTTTGAGGAAAAATTTCCGCTg                                                    >  2:317482/1‑140 (MQ=255)                                                                                  gAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGAATATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTg                                                    >  1:731427/1‑140 (MQ=19)                                                                                   aaaaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGa                                                   <  1:535303/140‑1 (MQ=25)                                                                                   aaaaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGa                                                   <  1:556949/140‑1 (MQ=25)                                                                                   aaaaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGa                                                   <  1:651449/140‑1 (MQ=21)                                                                                   aaaaaTCATCACAACCGATGCGCTGCGTTCCCAGAAACATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGa                                                   <  1:198922/140‑1 (MQ=11)                                                                                   aaaaaTCATCACAACAGATGCGATGAGTTACCAGAAACATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGa                                                   <  1:223698/140‑1 (MQ=11)                                                                                        tcatcaCAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGaa                                              <  1:504266/140‑1 (MQ=25)                                                                                        tcatcaCAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGAATATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGaa                                              <  2:731427/140‑1 (MQ=25)                                                                                          atcaCAACGGATGCGATCGGTTTCCAGAAAAGTTTGGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAAtt                                            <  2:355715/140‑1 (MQ=11)                                                                                            cacaACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTCTGATGATAAATTTGCGCTGAAAGAATTaa                                          >  1:340679/1‑140 (MQ=11)                                                                                                  tGATGCGATGGGTTGCCAGAAATATTTTGCAGAGAAGCTGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATc                                    <  1:245363/140‑1 (MQ=255)                                                                                                  tGATGCGATGGGTTGCCAGAAATATTTTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATc                                    <  1:286439/140‑1 (MQ=255)                                                                                                    aTGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCa                                  >  1:527426/1‑140 (MQ=21)                                                                                                      gCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAATTTTTCGGTGAAAGTATTAAATAATCCaga                                >  1:350404/1‑140 (MQ=11)                                                                                                       cGATGGGTTGCCAGAAAGATATCGCCGAGCAGATGCACAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCagag                               <  1:215488/140‑1 (MQ=11)                                                                                                         aTGGGTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCa                             >  1:11696/1‑140 (MQ=37)                                                                                                          tGGGTTGCCAGAAAGATATTGCAGACAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCAt                            <  1:251418/140‑1 (MQ=255)                                                                                                            ggTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGa                          <  2:527426/140‑1 (MQ=37)                                                                                                            ggTTGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGa                          <  1:75837/140‑1 (MQ=37)                                                                                                             gTTGCCAGAAAGATATTGCAGATAAGATGCTAACAGAGGCAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGAc                         <  2:340679/140‑1 (MQ=11)                                                                                                              ttGCCAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACa                        <  1:416942/140‑1 (MQ=37)                                                                                                                 ccAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGtt                     >  2:700572/1‑140 (MQ=37)                                                                                                                  cAGAAAGATATTGCAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTa                    <  2:169136/140‑1 (MQ=37)                                                                                                                               cAGAGAAGATGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATGAGTGaa       >  2:661500/1‑140 (MQ=37)                                                                                                                                  agaagaTGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATGAGTGAAAag    >  1:540416/1‑140 (MQ=255)                                                                                                                                   gaagaTGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATGAGTGAAAaga   >  1:738991/1‑140 (MQ=255)                                                                                                                                    aagaTGCAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATGAGTGAAAagag  >  1:6896/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                       TCATCGGGCAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATGAGTGAAAAGAG  >  NC_000913/737240‑737510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑