| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,602,565 | C→T | A359V (GCC→GTC) | lsrA → | Autoinducer‑2 ABC transporter ATP binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,602,565 | 0 | C | T | 100.0% | 61.4 / NA | 19 | A359V (GCC→GTC) | lsrA | Autoinducer‑2 ABC transporter ATP binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/12); total (7/12) | |||||||||||
GGCGGACGCATTATGCTGAATGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGCCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCA > NC_000913/1602438‑1602692 | ggCGGACGCATTATGCTGAATGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGa > 2:382627/1‑133 (MQ=255) tGCTGAATGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCt < 1:382627/133‑1 (MQ=255) gAATGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACt > 1:521301/1‑133 (MQ=255) tGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCAt < 1:143349/133‑1 (MQ=255) tGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCAt < 2:391094/133‑1 (MQ=255) atagagATCTGTAAATTATCCACTGGAGGACGATTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAAcc < 2:288871/131‑1 (MQ=255) aaaGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAAcc < 1:454935/133‑1 (MQ=255) aaTAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGAt > 2:610696/1‑133 (MQ=255) cGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAg > 1:251617/1‑133 (MQ=255) cTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATg > 1:70562/1‑133 (MQ=255) gcgcGGTCTGGTTTAGCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGcc < 2:251617/133‑1 (MQ=255) cgGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCAcc > 1:148270/1‑133 (MQ=255) tCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTg < 2:522940/133‑1 (MQ=255) tGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGa < 1:116926/133‑1 (MQ=255) ggAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCgg > 2:3805/1‑133 (MQ=255) gAATCTCGATGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTcaaccaa < 1:610696/133‑1 (MQ=255) tGCTTCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACaa < 1:3805/133‑1 (MQ=255) ttCGCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGGCGCCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCt < 2:521301/133‑1 (MQ=255) gCTGGTCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCa < 2:70562/133‑1 (MQ=255) | GGCGGACGCATTATGCTGAATGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGCCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCA > NC_000913/1602438‑1602692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |