| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,092,272 | (T)5→4 | coding (18/2424 nt) | pgaA ← | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine outer membrane porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,092,268 | 0 | T | . | 98.7% | 311.9 / 0.0 | 79 | coding (22/2424 nt) | pgaA | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine outer membrane porin |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base . (33/43); total (35/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAACGCGGAAGAGAGAC > NC_000913/1092131‑1092400 | aGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCttt > 2:810015/1‑140 (MQ=255) gctgAGTATTACCCTTGTGAGCCTCAATAATCAATTCATTATAGGCGTCATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCttttctgc < 2:212799/140‑5 (MQ=255) gctgAGTATTACCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCttttctgc < 1:108877/140‑5 (MQ=255) gctgAGTATTACCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGC‑‑CGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCGCATATGGTTTTCGGGCACC‑TTTTCTGCTa > 1:328678/1‑140 (MQ=255) gTATTACCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACtt > 1:532803/1‑140 (MQ=255) tATTACCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTGAGAAGTTTCAAACCCCGTTTGGTTTGCGGGAACC‑TTTTCTGCTACTTg > 2:233427/1‑140 (MQ=255) aTTACCCTTGCGAGCTTCAATAATCAATGCAACATCGGCGTTATTAACCGCACTCTTCGC‑‑CGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAAt < 2:328678/140‑1 (MQ=255) aCCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATa < 2:548316/140‑1 (MQ=255) aCCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATa < 2:532803/140‑1 (MQ=255) aCCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATa < 2:440361/140‑1 (MQ=255) ttGCGAGCTTCAATAATCAATGTATCATAAGCGTTATAAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATc < 1:363360/140‑1 (MQ=255) ttGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATc < 1:773598/140‑1 (MQ=255) ttGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATc < 1:808461/140‑1 (MQ=255) ttGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATc < 1:826505/140‑1 (MQ=255) ttGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATc < 1:8412/140‑1 (MQ=255) ttGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATGTGGTTTTTGGGTA‑CTTTTTCTGCTACTTGAATACATc > 1:364532/1‑140 (MQ=255) ttGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTACAAAGCCCGTTTGGTTCTCGGGCA‑CATTTTGTGCTACTTGAATACATc > 2:216329/1‑140 (MQ=255) gCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAAt < 1:170962/133‑1 (MQ=255) gCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAAt > 2:170962/1‑133 (MQ=255) gCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCt > 2:206292/1‑140 (MQ=255) gCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCAGCAGTAAGAAGTTTCGAAGCCCATATGGTTTTAGGGCACC‑TTTTCTGCTACTTGAATACATCCt > 2:223784/1‑140 (MQ=255) cGAGCTTCAATAATCTATGCATCATAGGCCTTATTAATAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTg < 1:216329/140‑1 (MQ=255) aGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTa < 2:454793/140‑1 (MQ=255) cTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTAtt < 2:444819/140‑1 (MQ=255) aaTGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTATCTGCTACTTGAATTCATCCTGTATTACTCCATGTAt > 1:300780/1‑140 (MQ=255) tGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTg > 1:783226/1‑140 (MQ=255) gCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGc > 2:405888/1‑140 (MQ=255) atcatAGGCGTTATTTACAGCACTCTTCGTCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCa < 1:328721/140‑1 (MQ=255) atcatAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCa < 2:784660/140‑1 (MQ=255) aGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtc < 1:206292/140‑1 (MQ=255) ggCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtct < 1:78622/140‑1 (MQ=255) ggCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtct < 2:652024/140‑1 (MQ=255) ggCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtct < 2:414436/140‑1 (MQ=255) ggCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtct < 2:806476/140‑1 (MQ=255) gCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtctc < 1:503766/140‑1 (MQ=255) ttattaACAGCACTCTTCGCCGTGGCACTAGCTGCTAGAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtctctct < 1:233427/140‑1 (MQ=255) ttattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtctctct < 2:783226/140‑1 (MQ=255) ttattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtct > 2:449349/1‑136 (MQ=255) ttattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtct < 1:449349/136‑1 (MQ=255) ttattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAATAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtctctct < 2:352423/140‑1 (MQ=255) tattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtctctctc > 2:168696/1‑140 (MQ=255) ttaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTg > 2:162642/1‑140 (MQ=255) ttaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTg < 2:793826/140‑1 (MQ=255) ttaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTg < 1:447741/140‑1 (MQ=255) ttaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACAACCTGTATGACTCCAGGTATTGCCAAAATCTCTCTCTg > 1:260560/1‑140 (MQ=255) aCAGCACTCTTCGCCCCGGGACCCGCTGCCAAAAATGCAGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt < 1:223784/140‑1 (MQ=255) cAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGCATACATCCTGTATTACTCCATGTATTGCCAAAAtct < 2:425669/129‑1 (MQ=255) cAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtct > 1:425669/1‑129 (MQ=255) cACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACTTCCTGTATTACTCCAGTTAATGCCAAAATGTCTCTCTGTATCTaa > 1:395117/1‑140 (MQ=255) aCTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtctctct < 2:632832/129‑1 (MQ=255) aCTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAAtctctct > 1:632832/1‑129 (MQ=255) aCTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt < 2:607165/135‑1 (MQ=255) aCTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt > 1:607165/1‑135 (MQ=255) ctctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAAtt > 1:5829/1‑140 (MQ=255) tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTg < 1:204703/130‑1 (MQ=255) tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTg > 2:204703/1‑130 (MQ=255) tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt < 2:191423/133‑1 (MQ=255) tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt > 1:191423/1‑133 (MQ=255) tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTa < 2:5829/140‑1 (MQ=255) tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTa > 2:595163/1‑140 (MQ=255) tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTa > 2:420071/1‑140 (MQ=255) tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTa > 1:792388/1‑140 (MQ=255) ttCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACa > 2:797964/1‑140 (MQ=255) gccgcGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTCTATTACTCCATGGAATGCCAAAATCCCTCTCGGTATCTATTTACAGGt > 2:397198/1‑140 (MQ=255) cgcgGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTaa < 1:79105/140‑1 (MQ=255) cgGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTAGTGCCAAATTCTTTCGCTGTATGTAATTACAGGTAACt > 1:256022/1‑140 (MQ=255) gACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGaa > 1:665864/1‑140 (MQ=255) aTGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATAttttt < 1:168696/140‑1 (MQ=255) tGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTg < 1:797964/140‑1 (MQ=255) tGCGGCAGTAAGAAGTTCCAAACCCCATTTGCTTTTCGGCCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTg < 2:260560/140‑1 (MQ=255) gCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGc < 1:810015/140‑1 (MQ=255) cGGCAGTAAGAAGTTTCAAAGCTCATTTGGTCTTCCGGC‑CCCTTTTCTTCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCa < 2:256022/140‑1 (MQ=255) gaagTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAAt < 1:420071/140‑1 (MQ=255) gaagTTTCAAAGCCCATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAAt < 1:595163/140‑1 (MQ=255) aaaGCCCACTTGGTTTTCGGGCTCC‑TTTTCACCAACTTGTATACATCCCGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCCCCTCATAATCCGttatt < 2:395117/140‑1 (MQ=255) cccATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAAt < 1:668189/128‑1 (MQ=255) cccATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAAt > 2:668189/1‑128 (MQ=255) cATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAAcgc > 2:155894/1‑140 (MQ=255) cATTTGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGCAACTGAAAGGAAAGATATTTTTGCAACTCAAAATCCGTTATTAAAcgc > 2:337204/1‑140 (MQ=255) tttGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAAcg > 1:823069/1‑137 (MQ=255) tttGGTTTTCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAAcg < 2:823069/137‑1 (MQ=255) tttCGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAATAGAAAGATCTTTCTGCCCCTCATAAACCGTAATTAAACGCGGAagaga > 2:331029/1‑140 (MQ=255) cGGGCACC‑TTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAACGCGGAAGAGAGAc > 1:442790/1‑140 (MQ=255) | AGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAACGCGGAAGAGAGAC > NC_000913/1092131‑1092400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |