| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 200,287 | A→G | Y787C (TAC→TGC) | bamA → | outer membrane protein assembly factor BamA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 200,287 | 0 | A | G | 99.0% | 340.0 / NA | 97 | Y787C (TAC→TGC) | bamA | outer membrane protein assembly factor BamA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (50/45); minor base C (0/1); total (50/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTACCGTTTGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTACGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAT > NC_000913/200152‑200411 | gTACCGTTTGGGATACAAACTGGGATTCCAGACAATATTGTGGATATCAGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGcc < 2:280633/140‑1 (MQ=255) ccGTTTGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAg > 1:406432/1‑140 (MQ=255) cGTTTGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGc > 1:17439/1‑140 (MQ=255) tttGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTCCAATGGATGT‑CCCCATGCGGGCCGTGGGTGTCCTCCTGCACCCAGCCg > 2:392706/1‑140 (MQ=255) tttGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCg > 2:415183/1‑140 (MQ=255) tGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGtt > 1:798696/1‑140 (MQ=255) tGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCACATTGGGGCCGATGATGTTCTGCTGCGCCCAGCCGtt > 1:252457/1‑140 (MQ=255) gggATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTc > 2:484705/1‑140 (MQ=255) aCTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGCTGGCGTTCTCCTGCGCCTAGCCGTTCAAAAAGTAc > 2:301240/1‑140 (MQ=255) ttCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGt > 1:807870/1‑131 (MQ=255) ttCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGt < 2:807870/131‑1 (MQ=255) tCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGgaga < 1:484705/140‑1 (MQ=255) tCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGgaga < 2:553540/140‑1 (MQ=255) cAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGgaga > 2:736161/1‑134 (MQ=255) cAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGgaga < 1:736161/134‑1 (MQ=255) ggATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGtt > 1:7492/1‑140 (MQ=255) gATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTc < 2:406432/140‑1 (MQ=255) ccGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGtt > 1:462366/1‑140 (MQ=255) cTATAGTGATCCAAGCAATATCTGTATGTCTGCGGATATCGCATTACATTGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACa < 2:329667/140‑1 (MQ=255) tataGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACAt > 1:697133/1‑140 (MQ=255) taGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCg > 2:50048/1‑140 (MQ=255) gATCCAAGCAATATCAGTATGTCTGTGGGGATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTaa < 1:274898/140‑1 (MQ=255) aTCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTaaa > 2:98253/1‑140 (MQ=255) aTCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGCAGACAAGTCAGCACAGTTCCATTTTAACATCGGTaaa > 1:244859/1‑140 (MQ=255) aTCCAAGCAATATCCGTATGTCTGAGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTaaa > 2:611089/1‑140 (MQ=255) tCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAGAGTACGATCGAGACAAAGCAGAACAGTTCCCGTTTAACATCGGTaaaa > 2:315021/1‑140 (MQ=255) cAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGTCAAGGCACAACTGTTCCAGTTTAACATCGGTAAAAcc > 1:366824/1‑140 (MQ=255) cAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAAcc > 2:26245/1‑140 (MQ=255) cAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAAcc > 1:526255/1‑140 (MQ=255) cAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAAcc > 2:796332/1‑140 (MQ=255) cAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAAcc > 2:668380/1‑140 (MQ=255) cAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAAc > 1:610617/1‑139 (MQ=255) cAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAAc < 2:610617/139‑1 (MQ=255) aGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTg > 2:118558/1‑140 (MQ=255) aGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTg > 2:587337/1‑140 (MQ=255) aGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTg > 2:639178/1‑140 (MQ=255) aGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTg > 1:662102/1‑140 (MQ=255) aGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTg > 1:586229/1‑140 (MQ=255) gCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACATGGCAGAATAGTTCCTGTTTAACATCGGTAAAACCTgg > 1:251227/1‑140 (MQ=255) gCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTgg > 1:446207/1‑140 (MQ=255) atCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAgt > 1:178573/1‑140 (MQ=255) atCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAgt > 1:792383/1‑140 (MQ=255) cGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGtt < 2:792383/140‑1 (MQ=255) cGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGtt < 1:118558/140‑1 (MQ=255) cGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGtt < 1:639178/140‑1 (MQ=255) gTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTtc > 1:714367/1‑140 (MQ=255) gTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTtc > 1:89669/1‑140 (MQ=255) aTGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTtctc > 1:814030/1‑140 (MQ=255) aTGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTtctc < 1:98253/140‑1 (MQ=255) tCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAATATCGGTGAAACCTGGTAAGTGTTCTCcac > 1:322058/1‑140 (MQ=255) cTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCcaca < 1:668380/140‑1 (MQ=255) tGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACaa > 1:70949/1‑140 (MQ=255) tGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACaa > 1:75835/1‑140 (MQ=255) tGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACaa < 2:7492/140‑1 (MQ=255) gCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACaaa > 2:710958/1‑140 (MQ=255) cGGGTATCGCATTACAATGGATGTCCCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACaaa > 2:636937/1‑140 (MQ=255) cGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTCACACCGGTAAAAGCTGGGAAGTGTTCTCCACAAAg > 2:254038/1‑140 (MQ=255) cGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAg < 1:294737/140‑1 (MQ=255) gggTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAgg < 2:17439/140‑1 (MQ=255) gggTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAgg < 2:154227/140‑1 (MQ=255) gTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGaa < 1:50048/140‑1 (MQ=255) gTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGaa < 2:662102/140‑1 (MQ=255) caggCATTACAATGGATAT‑CCCCATTGGGGCTGTTAGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATg < 2:230742/137‑1 (MQ=255) tCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATgt > 1:584015/1‑140 (MQ=255) tCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATgt < 2:89669/140‑1 (MQ=255) tCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATgt < 2:446207/140‑1 (MQ=255) gCATTACAATGGATGT‑CCCCATGGGGGCCGTGGGTTTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATgtag < 2:317459/140‑1 (MQ=255) ttACAATGGATGT‑CCCCATTGGGGCTGTTCGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATgtagtgg < 1:301240/140‑1 (MQ=255) gATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGTTAAGTGTCCTCGACTAAGGAATgtagtggtagtgctg > 1:230742/1‑137 (MQ=255) aTGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGaa < 2:40746/123‑1 (MQ=255) aTGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGaa > 1:40746/1‑123 (MQ=255) tGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCg < 2:586229/140‑1 (MQ=255) gT‑CCCCATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGa > 2:433763/1‑140 (MQ=255) ccccATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAACGATg > 1:68013/1‑140 (MQ=255) cATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACt > 1:812227/1‑140 (MQ=255) cATTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACt > 1:724567/1‑140 (MQ=255) aTTGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACtt < 2:75835/140‑1 (MQ=255) ttGGGGCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACttt > 2:514326/1‑140 (MQ=255) gggCCGTTGGTGTTCTCCTGCGTCCAGCCGTTCAAAAGGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAgg < 1:392706/140‑1 (MQ=255) gggCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAgg < 1:415183/140‑1 (MQ=255) gCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCTAAAAGTAAGATGGAGATAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg < 2:251227/140‑1 (MQ=255) gCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg < 1:636937/140‑1 (MQ=255) gCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg < 2:798696/140‑1 (MQ=255) gCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg < 1:514326/140‑1 (MQ=255) gCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg < 2:447196/140‑1 (MQ=255) gCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg > 1:447196/1‑140 (MQ=255) gCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg < 2:462366/140‑1 (MQ=255) gCCGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg < 1:710958/140‑1 (MQ=255) gCCGTTGGTGTTCTCCTCCGCCCAGCCGTTCAAAACGTACGATGGAGAAAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCg < 2:252457/140‑1 (MQ=255) cGTTGGTGTTCTCCTTCGCCCACCCCTTCCAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 1:254038/140‑1 (MQ=255) cGTTGGTGTTCTCCTGCGCCCATCCGTTCAAGAAGGACGCTGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 2:322058/140‑1 (MQ=255) cGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 2:178573/140‑1 (MQ=255) cGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 1:433763/140‑1 (MQ=255) cGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 2:714367/140‑1 (MQ=255) cGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 1:26245/140‑1 (MQ=255) cGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 2:584015/140‑1 (MQ=255) cGTTGGTGTTCTCCTGCGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 2:526255/140‑1 (MQ=255) cGTTGGTGTTCTCCTGCCCCCAGCCGTTCAAAAAGCACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAt < 2:244859/140‑1 (MQ=255) | GTACCGTTTGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGT‑CCCCATTGGGGCCGTTGGTGTTCTCCTACGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAAGTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGAT > NC_000913/200152‑200411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |