| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,787,637 | T→C | pseudogene (1241/2253 nt) | ygaQ → | putative uncharacterized protein YgaQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,787,637 | 0 | T | C | 97.9% | 333.3 / NA | 97 | pseudogene (1241/2253 nt) | ygaQ | putative uncharacterized protein YgaQ |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (51/44); minor base G (1/1); total (52/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGTTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATGAG > NC_000913/2787508‑2787773 | taCATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTg < 2:616741/140‑1 (MQ=255) cATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCa < 2:576290/140‑1 (MQ=255) tctcACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCaaa > 2:177019/1‑140 (MQ=255) tctcACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCaaa > 2:704075/1‑140 (MQ=255) ctcACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCa > 2:457912/1‑137 (MQ=255) ctcACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCa < 1:457912/137‑1 (MQ=255) tcACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAAt > 1:613053/1‑140 (MQ=255) tcACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAAt > 1:592368/1‑140 (MQ=255) tcACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAAt > 1:411959/1‑140 (MQ=255) tcACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAAt > 1:464962/1‑140 (MQ=255) aCTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAGCACCCAACAGTAACGAGGCTAGTATGTTGCAAAATCa > 1:231839/1‑140 (MQ=255) aCTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCa > 2:494707/1‑140 (MQ=255) aCTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCa > 2:623313/1‑140 (MQ=255) cTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCaa < 2:613053/140‑1 (MQ=255) tGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAAt > 2:42205/1‑140 (MQ=255) tGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAAt > 1:755553/1‑140 (MQ=255) aaaaGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAACGGGACCAGGCTATTATGTTGCAAAATCAATACg > 2:357767/1‑140 (MQ=255) aaaaGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACg > 1:669021/1‑140 (MQ=255) aaGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACGAGGGTAATATGTTCCAAAATCAATACGtt > 1:306552/1‑140 (MQ=255) cTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTg < 1:42205/140‑1 (MQ=255) ttCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAATGACCAGGCTATTATGGTGCAAAATCAATACGTTCGTGa > 2:355240/1‑140 (MQ=255) tCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGaa < 2:756783/140‑1 (MQ=255) gCAAGTAAAGATAACATTTCTAAGGATGAATTGGAAAACCTCCATGCACTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCg < 2:341578/140‑1 (MQ=255) gTAAAGATAACATCTCTAAGGAAGACTGGTAAAACCTACATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGaaaa < 1:230555/140‑1 (MQ=255) aTAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGc < 1:485695/140‑1 (MQ=255) aaCATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGt > 1:527943/1‑140 (MQ=255) aaCATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGt > 2:611121/1‑140 (MQ=255) aCATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTa < 2:785296/140‑1 (MQ=255) aCATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTa < 2:755553/140‑1 (MQ=255) aCATCTCTAAGGATGAATGGGAAAACCTCCACGCAGTAAGAGAAAAGCATTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTa < 2:277930/140‑1 (MQ=255) cATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTAc > 1:664182/1‑140 (MQ=255) aTCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACg > 2:110152/1‑140 (MQ=255) ctctAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAg < 1:611121/140‑1 (MQ=255) ctctAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAg > 2:510509/1‑140 (MQ=255) ctAAGGATGAATGGGTAAACCTCCACGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGt < 1:337844/140‑1 (MQ=255) ctAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGGCCAGGCTATTATGTTGCAAAATCAATATGTTCGTGAAATGCGAAAATATGGCGTACGAGGt < 1:623313/140‑1 (MQ=255) ctAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGt < 2:592368/140‑1 (MQ=255) ctAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGt > 1:502637/1‑140 (MQ=255) tAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAatat < 1:680263/127‑1 (MQ=255) tAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAatat > 2:680263/1‑127 (MQ=255) tAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGtt > 1:580119/1‑140 (MQ=255) aGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTa > 2:467679/1‑140 (MQ=255) aGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTa > 2:472903/1‑140 (MQ=255) gATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACg > 2:102604/1‑140 (MQ=255) aTGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGt > 1:183131/1‑140 (MQ=255) tGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGtt < 2:669021/140‑1 (MQ=255) aaTGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTat > 2:527317/1‑140 (MQ=255) aaTGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTat > 2:20651/1‑140 (MQ=255) aaTGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTat > 2:457383/1‑140 (MQ=255) ggAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTatgatg < 2:183131/140‑1 (MQ=255) ggAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTatgatg < 1:467679/140‑1 (MQ=255) ggAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTatgatg < 1:472903/140‑1 (MQ=255) ggAAAACCTCCATGCATTAAAACAAAAGCGTCTAACTGGTATGCCTAATACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTatgatg < 2:231839/140‑1 (MQ=255) aaaaCCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCg > 1:474057/1‑140 (MQ=255) aaaCCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACATTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCgg > 2:342668/1‑140 (MQ=255) aCCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCa < 2:580119/140‑1 (MQ=255) cTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCgaa > 1:498457/1‑140 (MQ=255) cATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGGAATGCGAAGATAAGGCGTACGAGGTGTACGGTATGATGCGGCAAAaca > 2:286090/1‑140 (MQ=255) cATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCaaa > 2:671798/1‑137 (MQ=255) cATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCaaa < 1:671798/137‑1 (MQ=255) cATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAaca < 1:693544/140‑1 (MQ=255) aTGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAacac > 2:497940/1‑140 (MQ=255) tGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACt > 2:485477/1‑140 (MQ=255) aaagaaaagCGTTTAAACGGAATGCCTAAAAGAACGCCCCAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACa < 2:306552/140‑1 (MQ=255) agaaaagCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATg < 1:497940/140‑1 (MQ=255) aaaagCGTTTAAATGGACTGCCCAAAACAACGCCCGAAATTGACCAGGGTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGaa < 2:229477/140‑1 (MQ=255) aagCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACa > 1:717161/1‑140 (MQ=255) cGTTTAAATGGAATGCCTAAAACAATACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAAt < 1:286090/140‑1 (MQ=255) tttAAATGGAATGCCTAAAACACCACCCAAAAGTGTCCAAGCTATTATCTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAg < 2:326133/140‑1 (MQ=255) aaaTGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGaaa < 2:170047/140‑1 (MQ=255) aaTGGAATGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAg < 2:80324/140‑1 (MQ=255) aTGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAAAATGAACAAATAGAAAGATCAAt > 2:338966/1‑140 (MQ=255) tGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGaa > 2:29896/1‑131 (MQ=255) tGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGaa < 1:29896/131‑1 (MQ=255) tGCCTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATa > 2:482108/1‑140 (MQ=255) ccTAAAACAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAGAACACTCGAAAGATAAACAAAGAGAAAGATCAATAAc > 1:237970/1‑140 (MQ=255) aaaCAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCa < 1:482108/140‑1 (MQ=255) aaaCAACACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCa < 1:493339/140‑1 (MQ=255) aacaacACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCAc > 2:203908/1‑140 (MQ=255) aacaacACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCAc > 2:649388/1‑140 (MQ=255) aacaacACCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGCTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAAcaccac > 2:197971/1‑140 (MQ=255) acaacaCCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCAcc > 2:334800/1‑140 (MQ=255) cacCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCGAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCtt < 2:498457/140‑1 (MQ=255) cacCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAAGACGAACAAATAGAAAGAGCAATAACCCCACCGCtt > 2:376780/1‑140 (MQ=255) cacCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATaa < 2:501148/129‑1 (MQ=255) cacCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATaa > 1:501148/1‑129 (MQ=255) cacCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCtt > 2:579803/1‑140 (MQ=255) cacCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCtt > 1:88016/1‑140 (MQ=255) cacCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCtt < 2:474057/140‑1 (MQ=255) cacCCAAAAGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCtt < 1:494707/140‑1 (MQ=255) cccAAAAGTGACCAGGCTATTATGTTGCAAACTCATTACCTTCGTGAATTGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTaa < 2:237970/140‑1 (MQ=255) aaaaGTGACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTaaaaa > 2:668636/1‑140 (MQ=255) gACCAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATaa < 2:502637/140‑1 (MQ=255) ccAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATg < 1:649388/140‑1 (MQ=255) ccAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATg < 2:717161/140‑1 (MQ=255) ccAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATg < 1:668636/140‑1 (MQ=255) ccAGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATg < 1:203908/140‑1 (MQ=255) aGGCTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATGAg < 1:102168/140‑1 (MQ=255) | TACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGTTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATGAG > NC_000913/2787508‑2787773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |