Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,429,721 A→G intergenic (+166/‑143) fklB → / → cycA FKBP‑type peptidyl‑prolyl cis‑trans isomerase FklB/serine/alanine/glycine/cycloserine:H(+)symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,429,7210AG98.6% 240.2 / NA 69intergenic (+166/‑143)fklB/cycAFKBP‑type peptidyl‑prolyl cis‑trans isomerase FklB/serine/alanine/glycine/cycloserine:H(+)symporter
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (30/38);  total (30/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGGGGAGCAGGCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAATTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGA  >  NC_000913/4429584‑4429856
                                                                                                                                         |                                                                                                                                       
agGGGAGCAGGCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGtt                                                                                                                                       >  1:298601/1‑140 (MQ=255)
     aGCAGGCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACAt                                                                                                                                  <  1:503941/140‑1 (MQ=255)
     aGCAGGCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTCCGCGTTATTACCTTGAGTTGACACTCACTTACAACATAAAGTTAACAt                                                                                                                                  >  2:400763/1‑140 (MQ=255)
      gCAGGCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACAtt                                                                                                                                 <  2:187474/140‑1 (MQ=255)
         ggCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACAtt                                                                                                                                 >  2:174974/1‑137 (MQ=255)
         ggCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACAtt                                                                                                                                 <  1:174974/137‑1 (MQ=255)
         ggCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGa                                                                                                                              >  2:791696/1‑140 (MQ=255)
          gCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGAt                                                                                                                             >  1:600049/1‑140 (MQ=255)
          gCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGAt                                                                                                                             >  1:342444/1‑140 (MQ=255)
          gCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGATATCACCGCGATATGATACTCACTTTAAACATAAAGTTAACATTAGAt                                                                                                                             >  2:261470/1‑140 (MQ=255)
            aTTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCt                                                                                                                           >  1:112152/1‑140 (MQ=255)
             ttCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTAATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTa                                                                                                                          >  2:90573/1‑140 (MQ=255)
               cAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTaaa                                                                                                                        <  2:99346/140‑1 (MQ=255)
               cAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTaaa                                                                                                                        <  2:60184/140‑1 (MQ=255)
               cAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTaaa                                                                                                                        >  1:747932/1‑140 (MQ=255)
                     tAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAg                                                                                                                  <  1:791696/140‑1 (MQ=255)
                     tAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAg                                                                                                                  <  1:22921/140‑1 (MQ=255)
                        aCCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTAt                                                                                                               <  2:181344/140‑1 (MQ=255)
                            ttCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCAt                                                                                                           >  1:542716/1‑140 (MQ=255)
                            ttCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCAt                                                                                                           >  1:67505/1‑140 (MQ=255)
                             tCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATc                                                                                                          <  2:760477/140‑1 (MQ=255)
                                gTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCcg                                                                                                       <  2:170976/140‑1 (MQ=255)
                                 tttGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCcgc                                                                                                      >  2:574491/1‑140 (MQ=255)
                                  ttGCCAAACGGCGCTTTTTTGTCTTACAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCcgcg                                                                                                     <  1:261470/140‑1 (MQ=255)
                                  ttGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCcgcg                                                                                                     >  1:694385/1‑140 (MQ=255)
                                    gCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTa                                                                                                   >  1:50956/1‑140 (MQ=255)
                                       aaaCGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTg                                                                                                <  1:135190/140‑1 (MQ=255)
                                           ggCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTAc                                                                                            <  1:489596/140‑1 (MQ=255)
                                           ggCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTAc                                                                                            <  2:21047/140‑1 (MQ=255)
                                            gcgcTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTAcc                                                                                           <  2:67505/140‑1 (MQ=255)
                                              gcTATTTTGTGTTGCTAAGACCGCGCAAGTGTGTATTCTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTa                                                                                         <  1:378129/140‑1 (MQ=255)
                                                 aTTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAata                                                                                      <  2:600049/140‑1 (MQ=255)
                                                  ttttGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAatat                                                                                     <  2:747932/140‑1 (MQ=255)
                                                       tgtTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATg                                                                                <  1:7738/140‑1 (MQ=255)
                                                       tgtTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATg                                                                                <  1:574491/140‑1 (MQ=255)
                                                            cAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTcc                                                                           <  2:694385/140‑1 (MQ=255)
                                                            cAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTcc                                                                           >  1:324123/1‑140 (MQ=255)
                                                                    ccGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAg                                                                   >  1:655968/1‑140 (MQ=255)
                                                                      gTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGAt                                                                 <  2:50956/140‑1 (MQ=255)
                                                                       tAAGCGTGTATTTTTGTGAGCTATTTCGCGTTATCCCCGGGATATGACTCTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGAtt                                                                <  2:298601/140‑1 (MQ=255)
                                                                         aGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATtcg                                                              <  2:342444/140‑1 (MQ=255)
                                                                           cGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATtcgtc                                                            <  1:123711/140‑1 (MQ=255)
                                                                           cGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATtcgtc                                                            <  1:811667/140‑1 (MQ=255)
                                                                                    ttGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAg                                                   <  1:155669/140‑1 (MQ=255)
                                                                                     tgtgAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAga                                                  <  2:591906/140‑1 (MQ=255)
                                                                                      gtgAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAgac                                                 <  2:655968/140‑1 (MQ=255)
                                                                                         aGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCAGATACAGATTCGTCGTATCATAgactga                                              >  2:479087/1‑140 (MQ=255)
                                                                                                      tATCACCGTGATATGCCACTCACTTTAAACATAAAGTGAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTag                                 <  1:215563/140‑1 (MQ=255)
                                                                                                      tATCACCGTGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTag                                 <  2:112152/140‑1 (MQ=255)
                                                                                                              tGATATGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGaa                         <  1:90573/140‑1 (MQ=255)
                                                                                                              tGATATGACACTCACTTTAAACATAAAGTTAACATCAGACCTAAATCTAAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGaa                         <  2:367595/140‑1 (MQ=255)
                                                                                                                   tGACACTCACTTTAAACTTAAAATTAACATTAGATATAATTCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAacaaca                    <  2:332462/140‑1 (MQ=255)
                                                                                                                   tGACACTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAacaaca                    >  2:816172/1‑140 (MQ=255)
                                                                                                                     acacTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAAcaca                  <  2:324123/140‑1 (MQ=255)
                                                                                                                     acacTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAAcaca                  <  1:751341/140‑1 (MQ=255)
                                                                                                                     acacTCACTTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAAcaca                  <  1:816172/140‑1 (MQ=255)
                                                                                                                      cactcactTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATTCAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACacag                 >  2:719747/1‑140 (MQ=255)
                                                                                                                      cactcactTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACacag                 >  1:797638/1‑140 (MQ=255)
                                                                                                                       cctcactTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACacaga                <  2:520796/139‑1 (MQ=255)
                                                                                                                           actTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAgg            >  1:793437/1‑140 (MQ=255)
                                                                                                                           actTTAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAgg            >  2:619079/1‑140 (MQ=255)
                                                                                                                           actTTAAACATAAAGTTAACATTAGATCTAAATCTTAGAATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAACGGCCGTAGAGCCTGAACAACACAGACAgg            >  1:755816/1‑140 (MQ=255)
                                                                                                                             tttAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTa          >  1:660935/1‑140 (MQ=255)
                                                                                                                               tAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACa        >  1:537924/1‑140 (MQ=255)
                                                                                                                               tAAACATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGAATAAAGGCCGTATAGTCTGAACTACACAGACAGGTACa        >  1:387128/1‑140 (MQ=255)
                                                                                                                                 aaCATAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAgg      >  1:96795/1‑140 (MQ=255)
                                                                                                                                     tAAAGTTAACATTAGATCTAATTCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACacaga                <  2:332363/126‑1 (MQ=255)
                                                                                                                                     tAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAATAACacaga                >  1:332363/1‑126 (MQ=255)
                                                                                                                                     tAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGgaaga  >  2:156823/1‑140 (MQ=255)
                                                                                                                                     tAAAGTTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGgaaga  >  1:421264/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                       
AGGGGAGCAGGCATTCAGCAATAAACCCTTCAGTTTGCCAAACGGCGCTATTTTGTGTTGCAAAGACCCCGTAAGCGTGTATTTTTGTGAGCTGTTTCGCGTTATCACCGTGATATGACACTCACTTTAAACATAAAATTAACATTAGATCTAAATCTTAGTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGA  >  NC_000913/4429584‑4429856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: