| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 933,596 | A→G | T125A (ACC→GCC) | ftsK → | cell division DNA translocase FtsK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 933,596 | 0 | A | G | 96.9% | 101.2 / NA | 32 | T125A (ACC→GCC) | ftsK | cell division DNA translocase FtsK |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (14/17); minor base C (0/1); total (14/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCGTGATGGCTTACACCATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTACCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTGCGCTGCTC > NC_000913/933461‑933727 | ggCGTGATGGCTTACACCATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGcctc > 1:30955/1‑140 (MQ=255) gTGATGGCTTACACCATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCtg < 1:809723/140‑1 (MQ=255) acacCATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTggcg < 2:186546/140‑1 (MQ=255) cacCATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTggcgg > 1:190846/1‑140 (MQ=255) ccATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCa > 1:647116/1‑140 (MQ=255) ttCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCCGCGACGAATACATTTATTATTTTTCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTTCTGTGGTCTGGCGGCAATc > 2:801859/1‑140 (MQ=255) ttCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATc > 2:78497/1‑140 (MQ=255) ttCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATc > 2:597211/1‑140 (MQ=255) ttCCCGTCATTATTGTCGGCGGTTGGTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATc > 1:659187/1‑140 (MQ=255) tCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGGCCTCAGTCCAGCGACGAATACATTGATTATTTTTCCGTTTCGCTACGCATCCTTGGCGTTTTGGAGGTCCTCCTTGCTCCCTGCGGTCTGGCGGCAATCa > 2:393547/1‑140 (MQ=255) tCCCGTCATTATTGTCGGCGGTTGTTGGGTTTCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTTCCGTTTCGCTACGCATCATTGGCGTTTTTGCGCTCGTCCTTGGCTCCTGTGGTCTGGCGGCAATcg > 2:440084/1‑139 (MQ=255) cGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACg < 2:647116/140‑1 (MQ=255) ggcggTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCCCATCCTTGTCTCTTGTGGTCTGGCGACAATCAACGCTGACGATATCTg > 2:329076/1‑140 (MQ=255) gcggTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTgg < 1:9203/140‑1 (MQ=255) gCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCgg > 2:724401/1‑140 (MQ=255) ggCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGc < 2:30955/140‑1 (MQ=255) tCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTTTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAg > 2:790917/1‑140 (MQ=255) cgacgaATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTAc > 2:797905/1‑140 (MQ=255) aTACATTGATTATTTTGCCGTTACGCTACGCATCAATGGCGTTTTGGCACTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCa < 2:280758/140‑1 (MQ=255) aTTGATTATTTTGCCGTTTCGCTACGCATCAGTGGAGTTTTGGCGCTCTTCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTAc < 2:314357/140‑1 (MQ=255) ttttGCCGTTTCGCTACGCATCATTTGCGTTTTGGCGTTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAAc < 1:329076/140‑1 (MQ=255) ttttGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTTTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAAc < 1:790917/140‑1 (MQ=255) ttttGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAAc < 1:78497/140‑1 (MQ=255) ttttGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAAc < 1:597211/140‑1 (MQ=255) ttGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTAGCAGCTTACTAAGCACTACGCTACAACCa > 1:314357/1‑140 (MQ=255) ccGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTg < 1:797905/140‑1 (MQ=255) gCATCATTGGCGTTTTGGCGCTAATCCTTCCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGc < 1:393547/140‑1 (MQ=255) atTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCggggg < 2:190846/140‑1 (MQ=255) atTGGCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCggggg < 2:659187/140‑1 (MQ=255) gCGTTTTGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACGGCTACACAGTAGCGGGGGAACt > 1:302275/1‑140 (MQ=255) cGTTTTGGCGCTCATCCTTGCCTTCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTa < 1:801859/140‑1 (MQ=255) ttttGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTAtt > 1:604159/1‑140 (MQ=255) ttGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTgc > 2:526455/1‑140 (MQ=255) ttGGCGCTCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTgc > 1:615757/1‑140 (MQ=255) gcgcTCATCCTTGCCTCCTGTGGTCTGGCGACAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTGCgct > 1:668665/1‑140 (MQ=255) tCATCCTTGCCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTGCGCTGctc < 1:724401/140‑1 (MQ=255) tCATCCTTGCCTCCTGTGGTCTGGCGACAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTGCGCTGctc < 2:668665/140‑1 (MQ=255) | GGCGTGATGGCTTACACCATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTACCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTGCGCTGCTC > NC_000913/933461‑933727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |