| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,692,183 | (C)5→4 | coding (669/1266 nt) | uidC ← | outer membrane porin family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,692,179 | 0 | C | . | 97.6% | 334.0 / 2.3 | 83 | coding (673/1266 nt) | uidC | outer membrane porin family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (38/43); minor base A (1/1); total (39/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GGCTGGTATTACGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCAT > NC_000913/1692041‑1692312 | ggctggTATTACGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGcc < 1:1080566/140‑1 (MQ=255)ggctggTATTACGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGcc < 1:1196239/140‑1 (MQ=255) gctggTATTACGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGccc > 2:92086/1‑140 (MQ=255) gctggTATTACGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGccc > 1:1228758/1‑140 (MQ=255) gctggTATTACGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCCCGAGAATAATTTGTATTTGATTGGAAACATCTTTCTGTACCGATGccc > 2:559758/1‑140 (MQ=255) cGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAg > 2:170677/1‑140 (MQ=255) cGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAg > 2:1093155/1‑140 (MQ=255) cGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAg > 1:859219/1‑140 (MQ=255) cGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑‑CCCAGAGAATAGc < 2:832623/140‑1 (MQ=255) cGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑‑CCCAGAGAATAGc > 1:832623/1‑140 (MQ=255) aCTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCg < 1:879740/140‑1 (MQ=255) aCTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCg < 1:835406/140‑1 (MQ=255) cTTAAACCTTCGAGCTGCGCGTGAAAGCCGATCTATTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGa < 2:709790/140‑1 (MQ=255) cTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGa < 1:1459899/140‑1 (MQ=255) ttAAGCCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGAc > 2:933807/1‑140 (MQ=255) ttAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGAc < 1:90241/140‑1 (MQ=255) ttAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGAc < 1:1093155/140‑1 (MQ=255) ttAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGAc > 1:138205/1‑140 (MQ=255) aaCCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGAc < 2:917958/137‑1 (MQ=255) aaCCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGAc > 1:917958/1‑137 (MQ=255) aaCCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTgg < 2:312037/140‑1 (MQ=255) atcTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGt < 2:1283516/138‑1 (MQ=255) ccTTCGAGCTGCGCGCAAAAGCCGATCAACTCCCCTTCCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTa < 1:559758/140‑1 (MQ=255) tCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTatca < 2:1371505/140‑1 (MQ=255) cGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCGTTCTGTACCGATG‑CCCAAGAGGATAGCGACTGGTatcat > 2:498310/1‑140 (MQ=255) ccGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTATGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCt < 1:1151560/140‑1 (MQ=255) tCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTgcgc < 1:48033/140‑1 (MQ=255) tCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTgcgc < 2:138205/140‑1 (MQ=255) cAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGcgcg < 1:333386/140‑1 (MQ=255) cAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGcgcg < 1:1232130/140‑1 (MQ=255) cAACGTATAATTCGGATCGAGCGGTATGCTTTTCTCGCGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAACAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGcgcg < 1:648588/140‑1 (MQ=255) aaCGTATAATTCGGGTCGAGCGGTACGCTCTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGa < 1:532983/140‑1 (MQ=255) gTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCTTCAGGCCGACTGGCGGATAAAAAAGAACGTGCGCGATGt > 2:515699/1‑140 (MQ=255) ataATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCACGCCAACTGGCGACTAAAAAAGTACGTGCGCGATGttt > 1:644891/1‑140 (MQ=255) taATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGCGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTa > 1:1273972/1‑140 (MQ=255) aTTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑TCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATc > 1:1328014/1‑140 (MQ=255) gTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTAttt > 1:1000153/1‑140 (MQ=255) gTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTAttt > 2:1111303/1‑140 (MQ=255) gTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGACGGCTAATAAAGAATGTGCGCTATGTTTATCGTAttt > 1:624189/1‑140 (MQ=255) gAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAATGAAGGTACGCGATTTTTATCGTATTTTcc > 1:691227/1‑140 (MQ=255) aGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGGGCGATGTTTATCGTATTTTccc > 1:692283/1‑140 (MQ=255) cGGTATGCTTTACTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGAT‑TCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGt < 2:1464332/140‑1 (MQ=255) gTATGCTTTTCTCGATAATACTTTGGATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCt < 1:515699/140‑1 (MQ=255) gTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCGAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCt < 2:1273972/140‑1 (MQ=255) gTATGCTTTTCTCGAAAATACTCTGTATCTGATTGGACACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCt < 1:498310/140‑1 (MQ=255) gTATGCTTGTCTCGAGAATACTCTGTATCTGATAGCAAATATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCt < 2:691227/140‑1 (MQ=255) aTGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTgg < 2:1478313/140‑1 (MQ=255) tGCTTTTCTCGAGAATAATTTGTATCTGATTTGAACCATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGc < 2:394224/140‑1 (MQ=255) cTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTg < 1:1137255/140‑1 (MQ=255) ctcGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTtata < 2:1000153/140‑1 (MQ=255) ctcGAGAATACTTTGTAACTGACTGGAAACATCTTTCTGTACCGATG‑CACCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTtata < 2:644891/140‑1 (MQ=255) tcGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGGGCGATGTTTATAGTATTTTCCCGTCTGGCTGTTATac > 1:678630/1‑140 (MQ=255) gagaATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAGAGAACGTGGGCGATGTATATCGTATGTTCCGGTCTGGCTGTTATacac > 2:502300/1‑140 (MQ=255) gagaATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATacac > 1:219394/1‑140 (MQ=255) gagaATACTCTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATacac > 1:188079/1‑140 (MQ=255) gaATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGTGATCTTTATCGTATTTACCCGTCTGGCTGTTATACAccc > 2:667563/1‑140 (MQ=255) gaATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACAccc > 1:1400878/1‑140 (MQ=255) tACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGTCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCtt > 1:1515474/1‑140 (MQ=255) cTTTGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtca < 1:170677/140‑1 (MQ=255) tttGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtcat > 1:33998/1‑140 (MQ=255) tGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtcatca < 2:1400878/140‑1 (MQ=255) tGTATCTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtcatca > 1:244695/1‑140 (MQ=255) cTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtc > 2:82205/1‑131 (MQ=255) cTGATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtc < 1:82205/131‑1 (MQ=255) gATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAc > 2:913885/1‑140 (MQ=255) gATTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAc < 2:244695/140‑1 (MQ=255) gATTGGAAACATCTTTCTGTACCGAT‑ACCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAc > 2:783212/1‑140 (MQ=255) gATTGGAAACATCTTTCTGTACAGATG‑CCCCGGTGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAc < 2:678630/140‑1 (MQ=255) gATTGGAAACATCTTGCTGTACAGAAG‑CCACAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAc < 1:667563/140‑1 (MQ=255) aTTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAcc > 2:1085177/1‑140 (MQ=255) aTTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAcc < 1:913885/140‑1 (MQ=255) aTTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAcc > 2:1200313/1‑140 (MQ=255) aTTGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGCTATACACCCATTCATCACGAATAcc > 1:603485/1‑140 (MQ=255) ttGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCg < 2:1191338/140‑1 (MQ=255) ttGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCg < 1:933807/140‑1 (MQ=255) atGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCg > 2:1086625/2‑140 (MQ=255) tGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAc < 2:176774/137‑1 (MQ=255) tGGAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAc > 1:176774/1‑137 (MQ=255) gAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGgtt > 2:1111103/1‑140 (MQ=255) gAAACATCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGgtt > 2:960362/1‑140 (MQ=255) tCTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCATTGATCACGAATACCGGTTGTTGaa > 1:618601/1‑140 (MQ=255) cTTTCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAAt < 1:1143975/140‑1 (MQ=255) cTTTCTGTACCGATG‑CCCCAGACAATAGCGATTGGCATCTTCATGCCAGCTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAAt < 2:416635/140‑1 (MQ=255) cTTTCTGTACCGAT‑ACCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAAt < 1:783212/140‑1 (MQ=255) tttCTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATc < 1:1111303/140‑1 (MQ=255) cTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAAt > 1:1376316/1‑136 (MQ=255) cTGTACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAAt < 2:1376316/136‑1 (MQ=255) tACCGATG‑CCCCAGATAATAGCGACTGGTTTGATCATCCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCa < 1:651181/140‑1 (MQ=255) tACCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCa > 1:980196/1‑140 (MQ=255) aCCGATG‑CCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGATGAATCAGTCCAt < 2:980196/140‑1 (MQ=255) | GGCTGGTATTACGACTTAAACCTTCGAGCTGCGCGTAAAAGCCGAGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCAT > NC_000913/1692041‑1692312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |