BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,994,202	(A)_7→6	pseudogene (264/503 nt)	pbl →	transglycosylase domain‑containing protein Pbl

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,994,196	0	A	.	100.0%	534.2 / NA	124	pseudogene (258/503 nt)	pbl	transglycosylase domain‑containing protein Pbl
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (78/46); total (78/46)

Only 100 of 130 total aligned reads displayed.

TTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAAT  >  NC_000913/2994062‑2994331

  aattaaAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTaaaaaacg                                                                                                                                  <  2:1242784/140‑3 (MQ=255)

  aattaaAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTaaaaaacg                                                                                                                                  <  2:213044/140‑3 (MQ=255)

   attaaAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTaaaaaacgt                                                                                                                                 <  2:1435830/140‑4 (MQ=255)

      aaaGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGa                                                                                                                             <  2:1110365/140‑1 (MQ=255)

       aaGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGaa                                                                                                                            <  2:1259037/140‑1 (MQ=255)

             tCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAAtaataa                                                                                                                      >  1:182677/1‑140 (MQ=255)

                     gttgAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGaa                                                                                                              <  2:1216785/140‑1 (MQ=255)

                       tgAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGC‑‑ATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACgag                                                                                                          >  1:1449689/1‑140 (MQ=255)

                         aaaGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACgag                                                                                                          >  1:1287374/1‑140 (MQ=255)

                         aaaGCAATCTAAAAAAGGATAGAATAGGCAATAACTGAGATAAGAATAGCAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACgag                                                                                                          <  2:575205/140‑1 (MQ=255)

                           aGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGAt                                                                                                        >  2:1016383/1‑140 (MQ=255)

                             cAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGAttt                                                                                                      >  1:945902/1‑140 (MQ=255)

                              aaTCTAAAAAAGGATAGCATAGGTAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATCCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTg                                                                                                     <  1:865829/140‑1 (MQ=255)

                              aaTCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTg                                                                                                     <  2:1287374/140‑1 (MQ=255)

                               aTCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGt                                                                                                    >  1:1043665/1‑140 (MQ=255)

                                   aaaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGa                                                                                                <  1:221151/140‑1 (MQ=255)

                                   aaaaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGa                                                                                                <  1:1219653/140‑1 (MQ=255)

                                    aaaaaGGATATCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAAATTATTGGTTAATGGAGATAAACCAGAAGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGAt                                                                                               <  2:1309055/140‑1 (MQ=255)

                                        aGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAAcc                                                                                           <  2:837324/140‑1 (MQ=255)

                                        aGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAAcc                                                                                           <  1:955089/140‑1 (MQ=255)

                                          gATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCt                                                                                         >  2:911732/1‑140 (MQ=255)

                                            tAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATTAAGGAGATTGGTTAGATAACCCTTg                                                                                       >  1:462852/1‑140 (MQ=255)

                                             aGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AACAAACGTGGAATAATAAGAGATGAACGAGATGTGTTAGATAACCCTTGt                                                                                      >  2:555942/1‑140 (MQ=255)

                                                aTAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTg                                                                                   <  1:1211369/140‑1 (MQ=255)

                                                      aaGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACAtt                                                                             <  2:858267/140‑1 (MQ=255)

                                                         aaCAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTaaa                                                                          >  2:1134932/1‑140 (MQ=255)

                                                         aaCAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTaaa                                                                          >  1:1526226/1‑140 (MQ=255)

                                                         aaCAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTaaa                                                                          >  1:366946/1‑140 (MQ=255)

                                                             gagaTAAGAATAACAATATAAAAAGCTTAAATTATTGTTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAg                                                                      <  1:555942/140‑1 (MQ=255)

                                                              agaTAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAgg                                                                     >  1:1394149/1‑140 (MQ=255)

                                                              agaTAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAgg                                                                     >  2:321170/1‑140 (MQ=255)

                                                                aTAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGaa                                                                   >  2:1188165/1‑140 (MQ=255)

                                                                  aaGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAAcc                                                                 <  1:205772/140‑1 (MQ=255)

                                                                   aGAATAACAATATAAAGAGTTTCGATTATTGCTTACTGCTGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCg                                                                <  2:462852/140‑1 (MQ=255)

                                                                   aGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCg                                                                >  1:1158669/1‑140 (MQ=255)

                                                                      aTAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCgaga                                                             <  1:30114/140‑1 (MQ=255)

                                                                          cAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGGTTTGTTAGATAAGCCTGGTCTGAACGTTAAGATAGGAACCGAGAtttt                                                         >  2:445824/1‑140 (MQ=255)

                                                                          cAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATGACCCTTGGCTGGACGTTAAAAGAGGAACCGAGAtttt                                                         >  1:407370/1‑140 (MQ=255)

                                                                          cAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGAtttt                                                         >  1:1475825/1‑140 (MQ=255)

                                                                            atatAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTtat                                                       >  1:63060/1‑140 (MQ=255)

                                                                               taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTtatata                                                    >  1:1218005/1‑140 (MQ=255)

                                                                               taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTtatata                                                    >  1:1177278/1‑140 (MQ=255)

                                                                               taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTtatata                                                    >  2:51683/1‑140 (MQ=255)

                                                                               taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTtatata                                                    >  2:1376940/1‑140 (MQ=255)

                                                                               taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTtatata                                                    >  2:1419879/1‑140 (MQ=255)

                                                                               taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTtatata                                                    >  1:383333/1‑140 (MQ=255)

                                                                               taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTtatata                                                    >  1:1273203/1‑140 (MQ=255)

                                                                                 aaGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAAc                                                  <  2:955612/140‑1 (MQ=255)

                                                                                  agagTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAAcc                                                 >  1:837843/1‑140 (MQ=255)

                                                                                    agTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTTAAATAGAAACCGAGATTTTATATAACCAt                                               >  1:527686/1‑140 (MQ=255)

                                                                                    agTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAt                                               >  2:1127817/1‑140 (MQ=255)

                                                                                    agTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGAAAACCCTTGGCTGAACATTAAAATAGAAACCCAGATTTTATATAACCAt                                               >  2:636187/1‑140 (MQ=255)

                                                                                     gTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtt                                              >  1:1050796/1‑140 (MQ=255)

                                                                                     gTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtt                                              >  2:966932/1‑140 (MQ=255)

                                                                                     gTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtt                                              >  2:1537995/1‑140 (MQ=255)

                                                                                      tttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCGTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAttt                                             >  2:968623/1‑140 (MQ=255)

                                                                                       ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtttt                                            >  2:1204969/1‑140 (MQ=255)

                                                                                       ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtttt                                            >  1:987314/1‑140 (MQ=255)

                                                                                       ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtttt                                            >  1:832304/1‑140 (MQ=255)

                                                                                       ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtttt                                            >  1:616531/1‑140 (MQ=255)

                                                                                       ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTAAACATTAAAATAGGAACCgaga                                                             <  2:1100734/123‑1 (MQ=255)

                                                                                       ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTAAACATTAAAATAGGAACCgaga                                                             >  1:1100734/1‑123 (MQ=255)

                                                                                       ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAAACCTTGTCTCAACCTGACAATAGGAACCGAGCTTTTATATTACCAtttt                                            >  2:719825/1‑140 (MQ=255)

                                                                                          gATTATTGGTTAATGTAGATAACCCAGATCCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCa                                         <  1:445824/140‑1 (MQ=255)

                                                                                          gATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCa                                         <  1:1284913/140‑1 (MQ=255)

                                                                                          gATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCa                                         <  2:570863/140‑1 (MQ=255)

                                                                                           attattGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCAc                                        >  1:1024033/1‑140 (MQ=255)

                                                                                            ttattGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACg                                       <  2:1043665/140‑1 (MQ=255)

                                                                                            ttattGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACg                                       <  2:1218005/140‑1 (MQ=255)

                                                                                            ttattGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACg                                       <  1:1204969/140‑1 (MQ=255)

                                                                                            ttattGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACg                                       <  1:1419879/140‑1 (MQ=255)

                                                                                              attGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGtt                                     >  2:1052983/1‑140 (MQ=255)

                                                                                                tGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCTAGATTTTATATAAACATTTTTCACGTtgt                                   >  1:465105/1‑140 (MQ=255)

                                                                                                  gTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTgg                                 >  2:303533/1‑140 (MQ=255)

                                                                                                  gTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTAGATAACCATTTTTCACGTTGTgg                                 >  1:457965/1‑140 (MQ=255)

                                                                                                   ttAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGa                                >  1:185644/1‑140 (MQ=255)

                                                                                                    tAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGCACCGAGATTTTTTAAAACCATTTTTCACGTTGTGGAg                               >  1:676225/1‑140 (MQ=255)

                                                                                                    tAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAg                               <  1:911732/140‑1 (MQ=255)

                                                                                                    tAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAg                               <  1:849190/140‑1 (MQ=255)

                                                                                                    tAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAg                               <  1:1376940/140‑1 (MQ=255)

                                                                                                     aaTGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGt                              >  1:249771/1‑140 (MQ=255)

                                                                                                            aTAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGt                              >  1:1430070/1‑133 (MQ=255)

                                                                                                            aTAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTgg                       >  2:1026683/1‑140 (MQ=255)

                                                                                                            aTAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTgg                       >  2:1419284/1‑140 (MQ=255)

                                                                                                            aTAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTgg                       >  1:779109/1‑140 (MQ=255)

                                                                                                             tAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGc                      <  2:1402762/140‑1 (MQ=255)

                                                                                                             tAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGc                      <  2:1449689/140‑1 (MQ=255)

                                                                                                             tAAACCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGc                      <  2:837843/140‑1 (MQ=255)

                                                                                                              aaaCCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCa                     <  2:1158669/140‑1 (MQ=255)

                                                                                                              aaaCCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCa                     <  2:1504227/140‑1 (MQ=255)

                                                                                                               aaCCAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCaa                    <  2:933/140‑1 (MQ=255)

                                                                                                                 ccAGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATg                  >  2:1300190/1‑140 (MQ=255)

                                                                                                                   aGATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGcc                <  2:1273203/140‑1 (MQ=255)

                                                                                                                    gATGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCt               >  1:762262/1‑140 (MQ=255)

                                                                                                                     aTGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATACCCATTTTTCACTTTGTGGAGTAACGTGGCAATGCCTg              >  1:528728/1‑140 (MQ=255)

                                                                                                                     aTGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg              <  2:219626/140‑1 (MQ=255)

                                                                                                                     aTGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg              >  2:335369/1‑140 (MQ=255)

                                                                                                                      tGCATATTCCCCTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTgg             >  1:1285038/1‑140 (MQ=255)

                                                                                                                               cccTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTtata    >  2:1458242/1‑140 (MQ=255)

                                                                                                                                 cTGTT‑AAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTAGCAATGCCTGGGGACTTATAAt  >  1:577728/1‑140 (MQ=255)

TTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAAT  >  NC_000913/2994062‑2994331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`