| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,130,114 | Δ1 bp | coding (102/1173 nt) | yghO ← | putative DNA‑binding transcriptional regulator YghO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,130,111 | 0 | A | . | 98.8% | 335.1 / ‑2.6 | 82 | coding (105/1173 nt) | yghO | putative DNA‑binding transcriptional regulator YghO |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base . (33/48); minor base G (1/0); total (34/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
TATCTGCCCCGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAA > NC_000913/3129973‑3130246 | tATCTGCCCCGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGCATCCAGTTTGGCTCCTCGGGATAAAGTGATGACGGaa > 1:648058/1‑140 (MQ=255) aTCTGCCCCGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGaaa > 2:207734/1‑140 (MQ=255) tCTGCCCCGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGaaag > 1:291719/1‑139 (MQ=255) tGCCCCGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGaaagcg > 1:875394/1‑137 (MQ=255) ccGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATaa < 2:875394/140‑1 (MQ=255) ccGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATaa < 1:1164969/140‑1 (MQ=255) ccGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATaa < 2:382130/140‑1 (MQ=255) cGCTTTTTTTGCCACCCGCGCCTGCCAGATGTTATTGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATaaa < 2:648058/140‑1 (MQ=255) cGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATaaa > 1:49451/1‑140 (MQ=255) cGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATaaa > 1:941436/1‑140 (MQ=255) cGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTGGGATCGTGGGGATAGAGTGATAACGG‑AAAGCGATaaa > 1:470423/1‑140 (MQ=255) cGCTTTTTTTGCCACCCACGCCTGCCAGAGGATATGGACCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATaaa < 1:624722/140‑1 (MQ=255) tttGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTa > 2:259303/1‑140 (MQ=255) ccacccacGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGt < 1:314377/140‑1 (MQ=255) gCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTtta < 1:1443376/140‑1 (MQ=255) cTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTttatt > 2:1521706/1‑140 (MQ=255) ccAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTaag > 2:68057/1‑140 (MQ=255) ccAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTaag > 2:1372299/1‑140 (MQ=255) cAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTaagg < 2:1395892/140‑1 (MQ=255) cAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTaagg < 1:773831/140‑1 (MQ=255) aGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTaagga < 1:259303/140‑1 (MQ=255) tgatATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCAt > 1:1469128/1‑125 (MQ=255) tgatATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCAt < 2:1469128/125‑1 (MQ=255) gatATGGTCCGTCCCCGTATTTTTCGCAGACGAATTCTCCTTGCGTTCCATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGt < 2:561349/140‑1 (MQ=255) gatATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGt < 2:177050/140‑1 (MQ=255) atGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCg > 2:780047/1‑140 (MQ=255) tGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGa > 2:320985/1‑140 (MQ=255) ggTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGaa < 2:1127766/140‑1 (MQ=255) ggTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGA‑GGGAAAGCGATAACTGCGCTAAGGTCATTTTTCTTAAGGAAGGTGCGaa > 2:709472/1‑140 (MQ=255) gtccgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAAc < 2:941436/140‑1 (MQ=255) tccgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACa > 2:1524847/1‑140 (MQ=255) tccgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACa < 1:320985/140‑1 (MQ=255) tccgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACa > 1:901536/1‑140 (MQ=255) ccgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACaa > 1:1056162/1‑140 (MQ=255) ccgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACaa > 1:1503110/1‑140 (MQ=255) cgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGaa > 1:97604/1‑136 (MQ=255) cgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGaa < 2:97604/136‑1 (MQ=255) cgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAg < 1:207734/140‑1 (MQ=255) cgtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAg < 1:301496/140‑1 (MQ=255) gtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACa > 1:1191235/1‑137 (MQ=255) gtccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACa < 2:1191235/137‑1 (MQ=255) tccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTc < 1:780047/140‑1 (MQ=255) tccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTc > 1:1032141/1‑140 (MQ=255) tccCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTc > 2:221656/1‑140 (MQ=255) ccccGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTcc < 2:1032141/140‑1 (MQ=255) ccccGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTcc < 1:1524847/140‑1 (MQ=255) ccccGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTcc < 2:49451/140‑1 (MQ=255) ccccGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTcc < 2:270294/140‑1 (MQ=255) ccGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCt < 2:280101/140‑1 (MQ=255) ccGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCt < 2:927512/140‑1 (MQ=255) gATTTTTCGCAGACAAAAGCTCTTTGCGTTCAATGTATAGAGGGGGTACCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGat < 2:470423/140‑1 (MQ=255) tttCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATga > 2:155162/1‑140 (MQ=255) cGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGAt < 2:1503110/140‑1 (MQ=255) aCAAATGCTCGTTGCGTTCAATGAATAAAGGTGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGt > 2:815524/1‑140 (MQ=255) aaTGCTCGTTGCGTTCAATGACTAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTg < 2:352568/140‑1 (MQ=255) tCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATc < 2:1057225/140‑1 (MQ=255) gTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGGGCGAACAAGTCCCTGAAATGAGATCATGTTTGTCATCTg > 2:631766/1‑140 (MQ=255) gTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATAAAGGAAGGGGCGGACAAGTCCCTGAGATGAGATCATGTTTGTCATCTg > 2:427792/1‑140 (MQ=38) ttGCGTTCAATGAATAATGGGGGTATCCAGTCTGGGTCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTgg < 2:555163/140‑1 (MQ=37) ttGCGTTCAATGAATAAAGGGGTTAGCCAATTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTgg < 1:586875/140‑1 (MQ=37) ttGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTgg < 1:1372299/140‑1 (MQ=255) ttCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCa < 2:901536/140‑1 (MQ=255) ttCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCa > 2:974712/1‑140 (MQ=255) ttCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCa > 2:1430932/1‑140 (MQ=255) tGAATAAAGGGGGTACCCAGTTAGGTTCGTCGGGATAGAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGaa < 1:624435/140‑1 (MQ=25) aaTAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACa < 1:974712/140‑1 (MQ=255) aaTAAAGGGGGTATCCAGTTTGCATCGTCGGCATACAGTGATGACGG‑ATAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACa < 2:420465/140‑1 (MQ=25) tAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGAAATGAGATCATGTTTCTCATCTAGAGCCATAGAACAgg > 1:420465/1‑140 (MQ=37) aaaGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAggg < 1:1263845/140‑1 (MQ=255) aaaGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAggg < 1:1430932/140‑1 (MQ=255) gTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGt < 2:353084/134‑1 (MQ=255) gTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGt > 1:353084/1‑134 (MQ=255) gTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTtcatca > 1:985808/1‑140 (MQ=255) tATCCAGTTTGGATCTTCGGGACAATGTGCTGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTcatcat < 1:427792/140‑1 (MQ=21) aTCCAGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATg < 1:815524/140‑1 (MQ=255) aGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtc < 2:291719/140‑1 (MQ=255) aGTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtc < 1:68057/140‑1 (MQ=255) gTTTGGATCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtca < 1:155162/140‑1 (MQ=255) aTCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtc < 1:205902/133‑1 (MQ=255) aTCGTCGGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtc > 2:205902/1‑133 (MQ=255) cgtcgGGATAAAGTGATGACGG‑TAATCGAGAAATGCCATAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTa < 1:709472/140‑1 (MQ=18) tcgGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTAcc > 2:1242439/1‑140 (MQ=255) cgGGATAAAGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTATCATCTGGCGCCGTGGTACAGGGTTCATCAAAAGTCATCTACTTACCt > 2:696751/1‑140 (MQ=21) aaaGTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCg < 1:1521706/140‑1 (MQ=255) gTGATGACGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACa < 1:696751/140‑1 (MQ=255) tgatgaCGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAg > 2:794319/1‑140 (MQ=255) tgaCGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGCGCGAACAAGTCCCTGCTATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTAATCAACTTACCTTCGCCGACAGTGa > 1:1160012/1‑140 (MQ=17) gaCGG‑AAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGaa > 1:1529160/1‑140 (MQ=255) | TATCTGCCCCGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGCGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAA > NC_000913/3129973‑3130246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |