| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,905,639 | (A)9→8 | intergenic (‑42/+92) | bglF ← / ← bglG | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase/transcriptional antiterminator BglG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,905,631 | 0 | A | . | 98.5% | 554.3 / 4.5 | 136 | intergenic (‑34/+100) | bglF/bglG | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase/transcriptional antiterminator BglG |
| Reads supporting (aligned to +/- strand): ref base A (0/2); new base . (51/82); total (51/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.49e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
ATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCTATAT > NC_000913/3905496‑3905759 | aaaaCGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGaaaaa > 2:232682/1‑140 (MQ=255) aaaCGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGaaaaaa < 2:1028815/140‑1 (MQ=255) aaaCGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGaaaaaa > 1:386002/1‑140 (MQ=255) aaCGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGaaaaaaa > 2:46120/1‑140 (MQ=255) aaCGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGaaaaaaa > 1:1548237/1‑140 (MQ=255) tAATCGCGTTGCGCATTGCATCAGATTCATAATGTTAACTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGc < 1:560822/140‑1 (MQ=255) tAATCGCGTTGCGCAATTCATCCGACTCACACTGTGATCAGCGCCCCCTACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGc < 2:409455/140‑1 (MQ=255) tAATCGCGTTGCGCAATGCATCAGACTCACAGTGTTATCCGCGCCCCCTACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGc < 2:640558/140‑1 (MQ=255) tAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGc < 1:94931/140‑1 (MQ=255) tAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGc < 1:1433111/140‑1 (MQ=255) tAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGc < 1:1544771/140‑1 (MQ=255) aaTCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGcc > 1:340477/1‑140 (MQ=255) aaTCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGcc < 1:232682/140‑1 (MQ=255) cgTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACg > 2:1470097/1‑140 (MQ=255) ttGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTg > 2:1537085/1‑140 (MQ=255) cAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAAttt > 1:857048/1‑140 (MQ=255) tCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAAAGGCGTGGCGTGAATCAAGCAATTTTTTTc > 1:613587/1‑140 (MQ=255) acaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAGACGGCCTGACTTGAATAAAGCAATTTTTTTCAg > 2:684716/1‑140 (MQ=255) acaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAg > 2:803472/1‑140 (MQ=255) acaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAg > 2:49420/1‑140 (MQ=255) acaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTCACATGAATCAAGCAATTTTTTTCAg > 1:742240/1‑140 (MQ=255) aaTGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGt < 2:821953/140‑1 (MQ=255) tGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGttt < 2:1288907/140‑1 (MQ=255) ttATCTGCGCCCCCGACTCCTGTGACTATTTATCTTGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTg < 2:561491/140‑1 (MQ=255) aTCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAACAAAACCCGAAAAAAATGGCCTGATTTGAATCACGCAATTTTTTTCACGTTTTGcc > 2:711682/1‑140 (MQ=255) cTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAAttttttt < 2:93400/127‑1 (MQ=255) cTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCg > 2:302560/1‑140 (MQ=255) tGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCCGACGTGAGTCATGCTATTTTTTTCAGGTTTTGCCCGc > 1:502875/1‑140 (MQ=255) gcgcCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCt > 2:1161838/1‑140 (MQ=255) gcgcCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCt > 1:1115419/1‑140 (MQ=255) cgcCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCtt < 1:315033/140‑1 (MQ=255) gcCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCtt > 1:801029/1‑139 (MQ=255) gcCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTa > 1:1474911/1‑140 (MQ=255) cccccGACTCCTGCGACAATTTCTCTGGCTAACTCGGTCGTAACTTGCTCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAg < 2:650757/140‑1 (MQ=255) ccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAGCGGCCTGATGTGCATCAAGCAATTTGTTTCGGGTTTTGCCCGCTTAGt > 2:478121/1‑140 (MQ=255) ccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGCGAATCAAGCAAGTTCTTTCAGCTTTTGCCCGCTTAgg > 1:650757/1‑139 (MQ=255) cccGGCTCCCGCGACTATTTTTGTGTCTACCTCCGTCTTAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTg < 1:486595/140‑1 (MQ=255) cccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTg < 2:1476641/140‑1 (MQ=255) cccGACTCCTGCGACAATTTTTCTGTCTAACTCCGTCCTAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTg < 1:422356/140‑1 (MQ=255) ccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGc > 2:201570/1‑140 (MQ=255) cGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCg > 1:860093/1‑140 (MQ=255) cGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCg > 2:1111727/1‑140 (MQ=255) gACTCCTGCGACTATTTTTCTGACTAACTCCCTCACAACATGCCCTCTGCCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCgg < 2:397762/140‑1 (MQ=255) tCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTaa < 1:883825/140‑1 (MQ=255) tCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTaa < 2:839288/140‑1 (MQ=255) tCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTaa < 2:1115419/140‑1 (MQ=255) tCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTaa < 2:186888/140‑1 (MQ=255) cTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACa < 2:1323225/140‑1 (MQ=255) cTGCGACTATTTTTCTGACTAATTCCGTCATGACTTGCCCTCTACCGCGTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACa < 2:477320/140‑1 (MQ=255) tGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACATGAATCAAGCAAATTTGTTCAGGTTTTGCCGGCTTAGTGCGGTAACaa > 2:422356/1‑140 (MQ=255) cGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAAATTTTTTCGGGTGTTGCCCGCTAAGTGCGGTAACAATc > 1:477320/1‑140 (MQ=255) aTTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACa < 2:255327/132‑1 (MQ=255) aTTTTTCTGGCTAACTCCGTCAAAACTTGCCTTCTTCCGATTTGCGGCAAAACTCC‑AAAAAAAACCAGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTa < 2:489493/140‑1 (MQ=255) tttttCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTAc < 1:201570/140‑1 (MQ=255) ttttCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACt < 2:918348/140‑1 (MQ=255) ttttCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACt < 2:1265761/140‑1 (MQ=255) ttttCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACt < 1:1341280/140‑1 (MQ=255) ttttCTGGCTAACTCCGCCATAACTTGCCCTCTACTGCTTTGCGGCAATACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACt < 2:523971/140‑1 (MQ=255) cTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGt < 2:880004/140‑1 (MQ=255) ggCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGtaa < 1:1077026/140‑1 (MQ=255) tAACTCCGTCATAACTTCCCCTTTACCGCTTTGCGCCAATACTCC‑AAATAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGtaataa < 2:427269/140‑1 (MQ=255) tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTc > 2:312711/1‑124 (MQ=255) tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAataata > 1:1053439/1‑134 (MQ=255) tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAataata < 2:1053439/134‑1 (MQ=255) tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAg > 2:1098095/1‑140 (MQ=255) tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAg > 1:226498/1‑140 (MQ=255) tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAg > 2:1078703/1‑140 (MQ=255) tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTGTGCCCGCTTAGTACGGCAACAATCCTTTACCCAGTAATAATATTTCAg > 2:564215/1‑140 (MQ=255) cTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCt > 1:153390/1‑140 (MQ=255) tGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCttt > 1:327252/1‑140 (MQ=255) cccTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTGCTCAGTCATAATAATTCAGTGTTCTTTgc > 1:691570/1‑140 (MQ=255) cccTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTgc > 1:293906/1‑140 (MQ=255) ctACCGCTTTGCGGCAAAACT‑CTAACAAACACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAc < 1:684716/140‑1 (MQ=255) tACCGCTTTGCGGCACAACTCC‑CAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:581585/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCa < 2:36266/138‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCa > 1:36266/1‑138 (MQ=255) tACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:293906/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:1382549/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:1103036/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:791413/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:781596/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:49420/140‑1 (MQ=255) aCCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCACAcgc < 2:340477/140‑1 (MQ=255) aCCGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGACCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTCTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgc < 2:863596/140‑1 (MQ=255) ccGCTTTGCGGCAAATCTCC‑AACAACAACTTGAAAAACACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:711682/140‑1 (MQ=255) ccGCTTTGCGGCAAACCTCC‑AATAACAACCTGAAAAACACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:425476/140‑1 (MQ=255) ccGCTTTGCGGCAAACCTCC‑AACAATAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:478121/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCC‑AATAAAAACCTTAAAAAAATGGCCTGACTTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 2:546174/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:905749/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:1161838/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:302560/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCACAcgcg < 1:901805/140‑1 (MQ=255) ccGCTTTGCGGCAAAAC‑CCCAAAAAAAATCTGAAAAAAAGGGCCGGGCGTGAATAAAACCATTTTTTTCAGGTTTTGCCCCCTTAGTGCGGTAAAAATCCTTTTCTCAGAAATAATATTTCAGTGTTCCTTGCGCAcgcg < 2:155019/140‑1 (MQ=255) cGCTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACgcgc < 1:803472/140‑1 (MQ=255) cTTTGCGGCAAAACTGC‑AAAAACAAGCTGAAAAAAACAGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGctc < 1:717829/140‑1 (MQ=255) cTTTGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATTATATTTAAGTGTTGTTTGCGCACGCGctc > 1:546174/1‑140 (MQ=255) ttGCGGCAAAACTCC‑AAAAAAAGCCTGAAAATAACGGCCAGACGTGAACCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCta < 2:613587/140‑1 (MQ=255) tGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:136474/132‑1 (MQ=255) tGCGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAAACCTTTACTAAGTTATAGTATTTCAGCGTTCTTTGCGCACGCGCTCtat > 2:524356/1‑140 (MQ=255) cGGCAAAACTCC‑AAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg > 1:986142/1‑132 (MQ=255) | ATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCTATAT > NC_000913/3905496‑3905759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |