| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 987,008 | (T)8→7 | intergenic (‑26/+577) | ompF ← / ← asnS | outer membrane porin F/asparagine‑‑tRNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 987,001 | 0 | T | . | 98.9% | 377.6 / ‑2.5 | 92 | intergenic (‑19/+584) | ompF/asnS | outer membrane porin F/asparagine‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base . (47/43); total (49/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGAAAG > NC_000913/986870‑987136 | ttACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGtttttttat > 1:34810/1‑138 (MQ=255) tACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACAcc > 1:358047/1‑140 (MQ=255) tACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATAATTCTTTATTACCCTCA‑GGGTTTTTTTATGACAcc > 2:541509/1‑140 (MQ=255) cAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTg > 1:1039515/1‑140 (MQ=255) aTCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTCCCCGCATGG‑TTTTTTTATGACACCTGCCa > 1:696445/1‑140 (MQ=255) cTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTACTTATTACGCTCCTGG‑TTTTTTCATGACACCTGCCACt > 1:569332/1‑140 (MQ=255) tACTTTGTTGCCATCGTTGTTACAGCTTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTg < 1:541509/140‑1 (MQ=255) attttGCTGCCATCTTTGTTATAGATTTCTGCAGGGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGc < 2:1039515/138‑1 (MQ=255) aCTTTGTTGCCATCTTTCTTATGGATTTCTGCAGCGTTTGCAGTACCTCCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGc < 2:471323/140‑1 (MQ=255) aCTTTGTTGCCATCTCTGTTATAGACTTCGGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGc < 1:750483/140‑1 (MQ=255) cTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGcc > 1:42515/1‑140 (MQ=255) cTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGcc > 1:258976/1‑140 (MQ=255) cTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGcc < 2:258976/140‑1 (MQ=255) cTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGcc < 2:1123170/140‑1 (MQ=255) cTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGCTTGAAGTACCTGGTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGcc < 2:643373/140‑1 (MQ=255) tttGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCg < 1:236232/140‑1 (MQ=255) ttgttgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGCATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGt > 1:57566/1‑140 (MQ=255) tgttgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTc > 1:82033/1‑140 (MQ=255) ttgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACTCTCATGGTTTTGTTT‑TGACACGTGCCACTGCCGTCaa > 1:471323/1‑140 (MQ=255) ttgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACTCTCATGG‑GTTTTTTGTGCAACTTGCCACTGCCGTCaa > 1:747858/1‑140 (MQ=255) ttgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCaa > 1:94351/1‑140 (MQ=255) ttgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCaa > 1:22061/1‑140 (MQ=255) ttgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTGTTATGACACATGCCACTGCCGTCaa > 1:643373/1‑140 (MQ=255) ttgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCGCATAG‑TTTTTTTATGACACCTGCCACTGCCGTCaa > 2:566011/1‑140 (MQ=255) tgCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAAt < 2:94351/140‑1 (MQ=255) aTCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGt > 1:1233569/1‑140 (MQ=255) aTCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGt > 1:855955/1‑140 (MQ=255) tCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGtt < 2:358047/140‑1 (MQ=255) gATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATaaa < 1:188246/140‑1 (MQ=255) aTTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGATTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATaaaa > 2:897453/1‑140 (MQ=255) cTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAAttt > 1:1294303/1‑140 (MQ=255) cTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGGCAATAAGTTGTGTCAATAAAAAttt > 1:501412/1‑140 (MQ=255) aGCGTTTGCAGTACCTGGTACTTACAGAGCACGGATGATCACTGCCAGGATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACgg < 2:451174/140‑1 (MQ=255) aGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACgg < 1:897453/140‑1 (MQ=255) aGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACgg < 2:22061/140‑1 (MQ=255) cGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGCATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGaa < 2:57566/140‑1 (MQ=255) cGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGaa < 2:34810/140‑1 (MQ=255) cGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGaa > 2:1499031/1‑140 (MQ=255) cGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGaa < 2:41867/140‑1 (MQ=255) cGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGaa < 1:1499031/140‑1 (MQ=255) tttGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACt > 1:37189/1‑140 (MQ=255) gCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTAtt > 1:774791/1‑140 (MQ=255) aCCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACCCCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATtgatga < 2:42515/140‑1 (MQ=255) gCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACgg < 1:976704/124‑1 (MQ=255) gCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACgg > 2:976704/1‑124 (MQ=255) actaACAGAGCAGGGACGATCACTGCCAGAATATTGCTCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg < 2:82033/140‑1 (MQ=255) actaACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTCCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg < 1:980849/140‑1 (MQ=255) actaACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg < 2:37189/140‑1 (MQ=255) actaACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg < 2:762958/140‑1 (MQ=255) actaACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg < 1:89524/140‑1 (MQ=255) actaACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg < 1:7976/140‑1 (MQ=255) actaACAGAGCAGGGACGATCAATGGCAGTATATTGCCCTTCATCATTATTTATTCCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg < 1:566011/140‑1 (MQ=255) taACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGgt < 2:1294303/140‑1 (MQ=255) agCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCttt > 1:35238/1‑140 (MQ=255) agCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCttt > 1:1494057/1‑140 (MQ=255) cAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTAt > 2:186355/1‑140 (MQ=255) gggACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTAtgt < 1:1169348/140‑1 (MQ=255) aCGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg < 1:643461/125‑1 (MQ=255) aCGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTg > 2:643461/1‑125 (MQ=255) aTCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGTCACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGc > 1:922784/1‑140 (MQ=255) aTCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGc > 2:1305666/1‑140 (MQ=255) aTCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGc < 1:875634/140‑1 (MQ=255) aTCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGc > 2:1127382/1‑140 (MQ=255) tCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCa < 2:35238/140‑1 (MQ=255) cTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGc > 2:1017425/1‑140 (MQ=255) tGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCa > 2:1347233/1‑140 (MQ=255) aGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCtt < 1:1358984/140‑1 (MQ=255) aGAATATTGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCtt < 2:774791/140‑1 (MQ=255) gAATTTTCCGCTTCATCATTATTTATTTCCTTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCttt < 2:1233569/140‑1 (MQ=255) aaTATTGCGGTTGATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGGCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTc > 2:1301366/1‑140 (MQ=255) ttGCGCTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCAtt < 2:855955/140‑1 (MQ=255) gcgcTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCa > 1:99528/1‑140 (MQ=255) gcgcTTCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTATTTATGTGTCTGCAGGCATCTTTCCATTCa > 1:951664/1‑140 (MQ=255) ttCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCAtt > 2:1542165/1‑134 (MQ=255) ttCATCATTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCAtt < 1:1542165/134‑1 (MQ=255) catcatTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTaa > 1:1538106/1‑140 (MQ=255) catcatTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTaa > 1:206461/1‑140 (MQ=255) catcatTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTaa < 1:1017425/140‑1 (MQ=255) catcatTATTTATTACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGCGTCTGCAGGCATCTTTCCATTCAAACTaa > 1:680625/1‑140 (MQ=255) atttattACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCg < 1:1347233/140‑1 (MQ=255) tttattACCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGc > 1:1141861/1‑140 (MQ=255) attaCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGc > 1:10165/1‑137 (MQ=255) attaCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGc < 2:10165/137‑1 (MQ=255) ttaCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTAcc > 2:847749/1‑140 (MQ=255) taCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTa < 2:1533285/137‑1 (MQ=255) taCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTa > 1:1533285/1‑137 (MQ=255) taCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCg > 2:1123350/1‑140 (MQ=255) taCCCTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCg > 2:1187748/1‑140 (MQ=255) ccTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGa < 1:1187748/140‑1 (MQ=255) ccTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGa < 1:847749/140‑1 (MQ=255) ccTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGa > 1:1509455/1‑140 (MQ=255) ccTCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGa > 1:1108106/1‑140 (MQ=255) tCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGGATCTTTCTATTTAACCTAACGTTTCGCTACCGTGaaa > 1:664143/1‑140 (MQ=255) tCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGaaa > 2:344630/1‑140 (MQ=255) tCATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAAGCAGCGTACCATTCAACCTAACATTTCGCTTCCGTGaaa > 2:749470/1‑140 (MQ=255) cATGG‑TTTTTTTATGGCACCTGCCAGTGCTGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGAAAg < 1:510805/140‑1 (MQ=255) cATGG‑TTTTTTTATGACACCTGCCACTGCCGTCAATAAATTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGAAAg > 1:1428137/1‑140 (MQ=255) | TTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGAAAG > NC_000913/986870‑987136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |