| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,003,357 | Δ1 bp | coding (469/543 nt) | ycbU → | putative fimbrial protein YcbU |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,003,356 | 0 | T | . | 98.8% | 330.5 / ‑0.1 | 82 | coding (468/543 nt) | ycbU | putative fimbrial protein YcbU |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (39/41); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
AGGCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGTTATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGCT > NC_000913/1003218‑1003490 | aGGCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGta > 1:845530/1‑139 (MQ=255)aGGCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGta > 1:373433/1‑139 (MQ=255)aGGCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGta < 1:1359797/140‑2 (MQ=255) ggCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGtat < 2:778841/140‑3 (MQ=255) cGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGtataa < 1:1483456/140‑5 (MQ=255) aaGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTc > 1:924757/1‑140 (MQ=255) aGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGtat < 1:342864/134‑3 (MQ=255) aGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGtat > 2:342864/1‑132 (MQ=255) ggtggtATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCcaca < 2:1325035/140‑1 (MQ=255) tggtATGGCAACGGGGATTGCCGTGCAAATTCTTGTTGCGCAAAGTCACCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACaaa < 2:654993/140‑1 (MQ=255) tggtATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGAGAACACACCCAAATAGCAACTT‑GGTATAAGTCCACaaa > 1:487297/1‑140 (MQ=255) tATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGc > 1:1507664/1‑140 (MQ=255) aTGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCg > 2:312875/1‑140 (MQ=255) aCGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGGTAACACACACAAATATAAACTTCG‑TATAAGTCCACAAAGGCGGGAGCa > 2:530986/1‑140 (MQ=255) aCGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCa > 2:1390380/1‑140 (MQ=255) aCGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACACAAGTATTAACTTCG‑TGTAAGACCACAAAGGCGGGAGCa > 2:476695/1‑140 (MQ=255) ggggATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAAc > 1:1162439/1‑140 (MQ=255) ggggATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAAc > 2:165299/1‑140 (MQ=255) gggATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGTGGGAGCAACg > 1:935929/1‑140 (MQ=255) gggATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTACG‑TATAGGTCCACCAAGGCGGGAGCAACg > 1:701955/1‑140 (MQ=255) ggATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACgg > 2:1402784/1‑140 (MQ=255) gATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACggg < 1:1390380/140‑1 (MQ=255) gTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAAt > 2:1011299/1‑140 (MQ=255) ttCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGAcgg < 1:1056775/140‑1 (MQ=255) tCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGAcggc > 2:804352/1‑140 (MQ=255) tGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGt > 1:1408761/1‑140 (MQ=255) gATGCGCAAAGTCAGCAAGAAATCCCGCTCATTGATGTCGAGCCTCTTCCGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGtt < 2:703352/140‑1 (MQ=255) tGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTtct < 1:46356/140‑1 (MQ=255) tGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTtct < 1:164757/140‑1 (MQ=255) tGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTtct < 1:1457612/140‑1 (MQ=255) tGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTtct < 2:1526555/140‑1 (MQ=255) cAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTAt > 2:1493066/1‑140 (MQ=255) cAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTAt > 2:1494516/1‑140 (MQ=255) tCAGCAAGAAATCCCTCTCAATCAGTTCCCGCCTCTTTCGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGa < 1:476695/140‑1 (MQ=255) tCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGTGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGa < 2:935929/140‑1 (MQ=255) tCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGa < 2:1240767/140‑1 (MQ=255) tCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGa < 2:259650/140‑1 (MQ=255) tCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCCTACTCCCTTAAATGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGa < 2:487297/140‑1 (MQ=255) tCAGCAAGAAATCCCCCTCAATCAGATCCCGCCTCTTCCGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGa < 1:514751/140‑1 (MQ=255) aGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGGTc < 2:1507664/140‑1 (MQ=255) aGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATc < 1:804352/140‑1 (MQ=255) aGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGt < 2:778153/140‑1 (MQ=255) aaaTCCCGCTCAATCAGATCCATCCTCTTACGCACTTAAGAGCCGGGGGTAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGttt < 2:701955/140‑1 (MQ=255) aTCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTAc < 2:924757/140‑1 (MQ=255) aTCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTAc > 1:68875/1‑140 (MQ=255) aTCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTAc < 1:845569/140‑1 (MQ=255) aTCCCGCTCAATCAGATCCAGCCTCCTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTAc < 1:576203/140‑1 (MQ=255) tCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTAcc > 1:948749/1‑140 (MQ=255) cccGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCa < 2:1294285/140‑1 (MQ=255) ccGCTCAACCAGGTCCCTCCTCTTACGCCCATAAAAGCCAGGGATAACTCACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAg < 2:737917/140‑1 (MQ=255) cGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGt > 2:1393676/1‑140 (MQ=255) gCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTg > 2:1524266/1‑140 (MQ=255) cTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACTGGCGGTAACGCGCCGGCGGTTCTCTATTTTGATCTGGGTTACCAGTGa > 2:576203/1‑140 (MQ=255) tCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGCTTTCTTTTTTGATCTGGTTTACCCGGGaa > 2:1476580/1‑140 (MQ=255) tCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCCACGGCGGGTCTTTATTTTTATCTGGTTTACCAGTGaa > 1:737917/1‑140 (MQ=255) cAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGt < 1:1132399/140‑1 (MQ=255) gCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑a < 1:74226/140‑1 (MQ=255) gCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑a < 1:1393676/140‑1 (MQ=255) ttACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGa < 1:1062351/125‑1 (MQ=255) ttACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGa > 2:1062351/1‑125 (MQ=255) ccTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTTGTCTGGTTTACCAGTGAAGGAGGGATGTTG‑AAACGGATTATc > 2:255540/1‑140 (MQ=255) cTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCt < 1:1402784/140‑1 (MQ=255) cTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCt < 1:165299/140‑1 (MQ=255) cTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCt < 2:373433/140‑1 (MQ=255) ttAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTg > 2:259839/1‑140 (MQ=255) ttAAAAGCCGGGGATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGATTACCAGCGAAAGAAGGATGTCG‑AAACGGATAATCTg > 1:550813/1‑140 (MQ=255) aGCCGGGGATAACACACTCAAAAATCAACTTCG‑TATAAGACCACAAAGACGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTc < 2:550813/140‑1 (MQ=255) cGGGGATAACACACTTAAATATTAACTTC‑TTATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGt < 1:530986/140‑1 (MQ=255) ggggATAACACACTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGGGATGATG‑AAACGGAGAATCTGGATTCTGtt > 1:577296/1‑140 (MQ=255) tAACACACTCAAATATCACCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTAt < 2:845530/140‑1 (MQ=255) acTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGAt < 1:1476580/140‑1 (MQ=255) acTCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGAt < 1:259839/140‑1 (MQ=255) tCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTa > 1:231633/1‑140 (MQ=255) tCAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGGGAAGGAGTGATGTTG‑AAACGGGTAAACTGGATTCTGTTCTTATTGGGATTa > 1:476986/1‑140 (MQ=255) cAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGTGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGAt > 1:1261658/1‑137 (MQ=255) cAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGTGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGAt < 2:1261658/137‑1 (MQ=255) cAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTaa > 2:861802/1‑140 (MQ=255) cAAATATCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAAGAGTGATGGTG‑ACACGAATAATCTGGATTCTGTTCTTATTGGGATTaa > 2:458004/1‑140 (MQ=255) atatCAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGGTCTCCATTTTGATCTGGTTTACCAGTGAAGGAATGATGTTGTAAACGG‑TACTCTGGATTCTGTGTTTATTTGTGTTAACGt > 2:739649/1‑140 (MQ=255) cAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTgggg < 2:68875/140‑1 (MQ=255) cAACTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTgggg < 2:218587/140‑1 (MQ=255) aCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGGGGTGATGCGACGTCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGCt < 2:515215/140‑1 (MQ=255) aCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGGTAACCTGGATTCTGTTTTTATTGGGATTAACGTGGGGCt > 2:509368/1‑140 (MQ=255) aCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGAt < 1:84101/128‑1 (MQ=255) aCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGc < 2:70484/139‑1 (MQ=255) aCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGc > 1:70484/1‑139 (MQ=255) aCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGGGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGAt > 2:84101/1‑128 (MQ=255) aCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGGTTACCAGTGAAGGAGTGATGATG‑AAACGGATAATCTGGATTCTGTTATTATTGGGATTAACGTGGGGCt > 2:510538/1‑140 (MQ=255) aCTTCG‑TATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGCTCCCTATTTTGATCTGGTTTACCAGCGAAGGAGGGATGGTG‑AAACGGATAAACTGCATTCTGTTGTTATAGGGATTAACACGGGGCt > 2:469952/1‑140 (MQ=255) | AGGCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGTTATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGAAGGAGTGATGTTG‑AAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGCT > NC_000913/1003218‑1003490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |