| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 303,093 | (G)6→7 | coding (103/615 nt) | yagU → | inner membrane protein that contributes to acid resistance |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 303,087 | 1 | . | G | 97.0% | 464.4 / 4.6 | 133 | coding (97/615 nt) | yagU | inner membrane protein that contributes to acid resistance |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base G (64/65); total (66/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 153 total aligned reads displayed.
CTCCTGAAGAGGTGTATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCACCGTATATT > NC_000913/302948‑303218 | cTCCTGAAGAGGTGTATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑t < 1:1509781/140‑1 (MQ=255) tCCTGAAGAGGTGTATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g > 2:1316489/1‑140 (MQ=255) ccTGAAGAGGTGTATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑g < 1:1472718/140‑1 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑ggggggctga > 1:1019362/1‑135 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑ggggggctga < 2:960169/140‑6 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑ggggggctga > 1:887179/1‑135 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑ggggggctga > 2:1095538/1‑135 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑ggggggctga > 1:5144/1‑135 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑ggggggctga > 1:136089/1‑135 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑ggggggctga < 1:1415947/140‑6 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑gggggg < 1:383061/136‑2 (MQ=255) gtgtATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑g‑gggggg > 2:383061/1‑135 (MQ=255) taACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTc > 1:950147/1‑140 (MQ=255) tAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTg > 1:949952/1‑140 (MQ=255) tAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTg > 1:970044/1‑140 (MQ=255) tAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTg > 1:86169/1‑140 (MQ=255) tAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTg > 2:445991/1‑140 (MQ=255) aaTGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTgc > 2:1228332/1‑140 (MQ=255) aaTGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGATGGCGTTGATTCGGAATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTgc > 2:680584/1‑140 (MQ=255) tGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTgccg > 1:895983/1‑140 (MQ=255) tGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTgccg > 1:182047/1‑140 (MQ=255) tGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTgccg > 2:169260/1‑140 (MQ=255) tGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTCCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTgccg > 2:795292/1‑140 (MQ=255) tGGTACAAGCAGGGTAGATATGAATATATATGAACAAGCTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TGGG‑GGGGGCTGAAGTTCCATTgcc < 1:705675/140‑1 (MQ=255) aCAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTgtcg < 2:320160/136‑4 (MQ=255) aCAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTgtcg > 1:320160/1‑136 (MQ=255) gCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGt > 1:1407988/1‑138 (MQ=255) gCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGt < 2:1407988/138‑1 (MQ=255) gCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCA‑TCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGc > 1:256829/1‑140 (MQ=255) caggggTAGATATGAATTTATTGGAACAAATACCACCGAACCGCAGACATTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAg < 2:757062/137‑1 (MQ=255) aGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCAt > 1:1489552/1‑125 (MQ=255) aGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCAt < 2:1489552/125‑1 (MQ=255) aGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGcc < 2:931152/140‑1 (MQ=255) gggTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGccc < 1:1228332/140‑1 (MQ=255) ggTAGATATGAATATTTTTGAACAACCTCCACCGAACTGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCg < 1:756402/140‑1 (MQ=255) ggTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCg > 1:590726/1‑140 (MQ=255) gTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCgg < 2:280634/140‑1 (MQ=255) atatGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGat < 1:1327628/140‑1 (MQ=255) tatGAATATATTTGATCAAACTTCACCGAGCCGCAGAGGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGat < 1:680584/140‑1 (MQ=255) tatGAATATATTTGAACAAACTTCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGat < 1:445991/140‑1 (MQ=255) tatGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGat < 2:38593/140‑1 (MQ=255) tatGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGat < 2:251242/140‑1 (MQ=255) tatGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGat < 1:169260/140‑1 (MQ=255) atGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGata > 2:1542162/1‑140 (MQ=255) tGAATATATTTGAACAACCTCCGCCGAACCGTAGAAGTTATGGTCTTGATGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGatat < 2:514428/140‑1 (MQ=255) aaTATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGccc < 1:769868/129‑1 (MQ=255) aaTATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGt > 1:1045064/1‑140 (MQ=255) aaTATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTACCTCCACGTAGCCCGGTGGATATGt > 1:514428/1‑140 (MQ=255) tatatTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAGCG‑‑G‑GGGGGCTGAATTTCCGTTGCCGCAACGTATCCCGGTGCATATGttt > 2:731886/1‑140 (MQ=255) tatatTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCgg < 1:1085213/129‑1 (MQ=255) atTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAAt > 2:1137546/1‑140 (MQ=255) tGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCa < 2:895983/140‑1 (MQ=255) tGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCa < 2:1469748/140‑1 (MQ=255) gAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAg > 1:991941/1‑140 (MQ=255) gAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAg > 1:868225/1‑140 (MQ=255) aaCAAACTCCACCGAACTGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGc > 2:1353421/1‑140 (MQ=255) aaCAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGTTGAAGTTCGATTGCCGACACGTAGCTCGGTGGATATGTTTAATGCAGc > 2:557459/1‑140 (MQ=255) aaCAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATg > 2:336730/1‑129 (MQ=255) aaCAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGc > 1:538328/1‑140 (MQ=255) aaCAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGc > 2:42418/1‑140 (MQ=255) aaCAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCAATGCCGCCACGTCGCGCGGTGGTTATGTTTAATGCAGc > 1:622704/1‑140 (MQ=255) aaaCTCCACCGAACCGCGGACGTTATGGTCTTGCTACATTCATTGGGCCGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCgtg < 2:622704/140‑1 (MQ=255) aaaCTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCgtg < 2:147987/140‑1 (MQ=255) aCTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGtgtg > 2:1452572/1‑140 (MQ=255) aCTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGtgtg > 2:225016/1‑140 (MQ=255) ccACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGcc < 2:86169/140‑1 (MQ=255) ccGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCgg < 2:805954/140‑1 (MQ=255) ccGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCgg < 1:1095538/140‑1 (MQ=255) ccGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCgg < 2:590726/140‑1 (MQ=255) ccGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCgg < 2:1082004/140‑1 (MQ=255) cGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGa < 2:1415782/140‑1 (MQ=255) gAACCGCAGACGTTATGGTCTTTCTGCATTCCTTGTGCTGATTGCTGGGGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGaa < 2:647623/140‑1 (MQ=255) aCCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATc > 2:1346208/1‑140 (MQ=255) ccGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCa < 1:1165514/140‑1 (MQ=255) ccGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCa < 1:1452572/140‑1 (MQ=255) cGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCAt > 1:877725/1‑140 (MQ=255) cGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGCGGATATGTTTAATGCAGCGTGTGGCCCGGAATCAt > 2:1179254/1‑140 (MQ=255) cAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGTCCGGa > 2:88979/1‑133 (MQ=255) gACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAAt < 1:1472500/140‑1 (MQ=255) gACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAAt < 2:273482/140‑1 (MQ=255) gTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAg > 2:1401976/1‑140 (MQ=255) tATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAggg > 2:1445170/1‑140 (MQ=255) ttGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAgg < 1:42418/140‑1 (MQ=255) tgctgcATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGc < 1:1346208/140‑1 (MQ=255) tgctgcATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAAAGCAACGTTTGGCCCGGAATCATTAATCAGGGCTGCAGGc > 2:515778/1‑140 (MQ=255) gCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTcg > 2:1187597/1‑140 (MQ=255) cTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTcgc < 1:251138/140‑1 (MQ=255) ttGCTGGCGTTGTTTCCACATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGCCCCGGAATTATTGATCGGGGCTGCAAGCCAAATTGATTGTTCGCGTaa > 2:730851/1‑140 (MQ=255) tGCTGGCGTTGTTTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAAt < 1:292645/140‑1 (MQ=255) gCGTTGTTTCCGCATGCGTGAAC‑T‑‑GAGGGGGCTGAAGGTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTtct < 1:731886/140‑1 (MQ=255) gttgttTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCa < 2:758836/140‑1 (MQ=255) tgttTCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAAt < 2:868225/140‑1 (MQ=255) tttCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATcc < 2:887179/140‑1 (MQ=255) ttCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCa < 1:889830/140‑1 (MQ=255) ttCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCa < 1:1187597/140‑1 (MQ=255) ttCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCa < 1:340895/140‑1 (MQ=255) tCCGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCAc > 1:1230490/1‑140 (MQ=255) cGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTtc < 1:1515273/129‑1 (MQ=255) cGCATTCGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTtc > 2:1515273/1‑129 (MQ=255) cGTGAAG‑TG‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCACCGTATAtt > 1:757497/1‑140 (MQ=255) | CTCCTGAAGAGGTGTATAACATAATGGTACAAGCAGGGTAGATATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAG‑T‑‑G‑GGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCACCGTATATT > NC_000913/302948‑303218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |