| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,227,340 | (C)6→7 | pseudogene (1419/1436 nt) | mdtQ ← | putative multidrug resistance outer membrane protein MdtQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,227,334 | 1 | . | C | 96.1% | 259.3 / 2.0 | 77 | pseudogene (1425/1436 nt) | mdtQ | putative multidrug resistance outer membrane protein MdtQ |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base C (37/37); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑C‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAATGATGCCCG > NC_000913/2227196‑2227465 | ctgctgCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAAAGCTGAATAAACGGTTACTATAGAAGTGGCAGATCATCAGCGTTTGTA‑c > 2:703807/1‑140 (MQ=255) tgctgcGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑c‑c < 2:1038605/140‑1 (MQ=255) tgctgcGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑c‑c > 1:1393175/1‑140 (MQ=255) cgcCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑c‑c‑ccccc > 2:240811/1‑139 (MQ=255) cgcCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑c‑c‑ccccc < 2:1038608/140‑2 (MQ=255) cgcCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑c‑c‑ccccc > 2:1343392/1‑139 (MQ=255) cAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑c‑c‑cccccgcc < 2:903368/140‑5 (MQ=255) ataaCGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACg < 1:240811/140‑1 (MQ=255) ataaCGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACg < 1:1506193/140‑1 (MQ=255) ataaCGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACg < 2:119770/140‑1 (MQ=255) ataaCGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCCGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACg < 2:1069623/140‑1 (MQ=255) aaCGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCa < 1:1291987/140‑1 (MQ=255) aCGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCAc < 2:1062601/140‑1 (MQ=255) aCGCGCACGCTTTGCCGCTCCCCGAATCGGTGGTGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCAc < 2:717753/140‑1 (MQ=255) gcACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACg > 2:1250966/1‑133 (MQ=255) gcACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACg < 1:1250966/133‑1 (MQ=255) gcACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCa > 1:15868/1‑135 (MQ=255) gcACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCa < 2:15868/135‑1 (MQ=255) gcACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGt < 1:1404640/140‑1 (MQ=255) gcACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGt > 1:1469640/1‑140 (MQ=255) cACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACg < 2:1145315/132‑1 (MQ=255) cACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACg > 1:1145315/1‑132 (MQ=255) cACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTg > 2:1026199/1‑140 (MQ=255) cACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTg > 2:359790/1‑140 (MQ=255) ctctTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAg < 1:359790/140‑1 (MQ=255) tGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGATAGGACC‑C‑CCCCACCCACTGCACCAGTGAGTTGaa > 2:702580/1‑140 (MQ=255) gATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGa < 2:1469640/140‑1 (MQ=255) gATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGa < 2:880594/140‑1 (MQ=255) gATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGa < 1:1343392/140‑1 (MQ=255) tCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGa > 2:1016061/1‑138 (MQ=255) tCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGa < 1:1016061/138‑1 (MQ=255) tCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAgg > 1:359763/1‑140 (MQ=255) tCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAgg > 1:1238240/1‑140 (MQ=255) tCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAgg < 1:129328/140‑1 (MQ=255) cGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGt > 2:385434/1‑122 (MQ=255) cGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGt < 1:385434/122‑1 (MQ=255) cGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATc < 1:189482/140‑1 (MQ=255) ggAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCa < 2:73882/140‑1 (MQ=255) gAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCAc > 1:369944/1‑140 (MQ=255) aGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACt > 1:764128/1‑140 (MQ=255) gCGGTAATAATCGCACCCTGTGCCATCGATTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑C‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGcc < 1:553178/140‑1 (MQ=255) cGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGcc < 1:832013/140‑1 (MQ=255) ggTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGccc < 2:764128/140‑1 (MQ=255) taataaTCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCACCCAACGCACCAGTGAGCTGAATCGAGGCATCCAGCCACTGACCtt > 2:1227048/1‑140 (MQ=255) cAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACa < 2:1393175/140‑1 (MQ=255) aaCCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAg > 1:296161/1‑140 (MQ=255) tgtgCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCa > 2:783472/1‑140 (MQ=255) ttCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACa < 1:780396/123‑1 (MQ=255) ttCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACa > 2:780396/1‑123 (MQ=255) cACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAg > 1:856906/1‑140 (MQ=255) tAACGCTGAATAAACGTTAAGTATAGAAGCCGCATATTATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGcgcg < 1:702580/140‑1 (MQ=255) aaCGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCgg > 2:1119566/1‑140 (MQ=255) cGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCgggg > 2:1230752/1‑140 (MQ=255) cGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCgggg > 2:207788/1‑140 (MQ=255) tGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGAtt > 1:943363/1‑140 (MQ=255) aaTAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATCACAGGCCATTGGCCTGCTCACGCAGCGCGGGGGTTCt > 1:532606/1‑140 (MQ=255) tataGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCACCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGAcg < 1:1227048/140‑1 (MQ=255) taGAAGGCGCATATCGTCAGCGTTTGTA‑CTC‑CCCCGCACAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGAcgcg < 1:600610/140‑1 (MQ=255) taGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGAcgcg < 1:1122930/140‑1 (MQ=255) taGAAGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGAcgcg < 1:1201928/140‑1 (MQ=255) aGAAGGCGCATATCACCAGCGTCTGCA‑C‑CACCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCgg < 1:447270/140‑1 (MQ=255) aaGGCGCATATCATCTGCGTTTTTACC‑C‑CCCCGCCCACCGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGa < 1:479707/140‑1 (MQ=255) aaGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCGGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGa < 1:1026199/140‑1 (MQ=255) aaGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGa < 1:783472/140‑1 (MQ=255) aaGGCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGa > 1:1499472/1‑140 (MQ=255) ggCGCATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAAc > 1:949830/1‑140 (MQ=255) gcgcATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAAcc > 1:1358972/1‑140 (MQ=255) cgcATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCa < 1:1119566/140‑1 (MQ=255) cgcATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTAGCCCGCTCTCGCCGCGGGGGGATTCAGGCTGCGCTGACGCGGGAACCa > 2:427727/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAg > 2:163560/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAg > 2:220053/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAg > 2:386862/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCAATTGGCCCGCTCACGGAGCGCGGCGATGCTCGCTTCGGTGACGCGGGAACCAg > 1:558234/1‑140 (MQ=255) atatCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCTCGCTCACGGAGCGCGGTGATTCTGGTTTCGATGACGCGGGAACCAGCa > 2:447270/1‑140 (MQ=255) atatCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCGCGCTCACGGAGCTCGGGGATTCTGGATTCGGTGACGCGGGAACCAGCa > 2:479707/1‑140 (MQ=255) atatCATCAGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCACGCTCACGCAGCCCGGGGATTCTGGATTCGGTGACGCGGGAACCAGCa > 2:600610/1‑140 (MQ=255) atcaGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAatgat < 1:163560/140‑1 (MQ=255) tcaGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAatgatg > 1:863118/1‑140 (MQ=255) caGCGTTTGTACC‑C‑CCCCGCCCCACGCACCAATGAGTTGCATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAATGATGc < 2:532606/140‑1 (MQ=255) caGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAg > 2:885447/1‑131 (MQ=255) caGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAg < 1:885447/131‑1 (MQ=255) caGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAATGATGc < 1:1343947/140‑1 (MQ=255) aGCGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAATGATGcc < 2:943363/140‑1 (MQ=255) cGTTTGTACC‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAATGATGCCcg > 1:126172/1‑140 (MQ=255) | CTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGTA‑C‑C‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAATGATGCCCG > NC_000913/2227196‑2227465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |