| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,949,993 | (T)5→6 | coding (752/1332 nt) | argA → | N‑acetylglutamate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,949,988 | 1 | . | T | 95.8% | 305.1 / 4.3 | 96 | coding (747/1332 nt) | argA | N‑acetylglutamate synthase |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base T (45/46); total (48/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
ATGATTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑T‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAG > NC_000913/2949854‑2950122 | atgatTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t‑tt‑tt > 2:1051228/1‑140 (MQ=255) tGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑t‑tt‑tttgcgt > 2:95500/1‑135 (MQ=255) gTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTgg < 1:368080/140‑1 (MQ=255) gTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTgg > 2:870948/1‑140 (MQ=255) ttttGCTCTTCCCAGTGCGTCATTACTGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGgcg < 1:460417/140‑1 (MQ=255) ttttGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGgcg < 1:869146/140‑1 (MQ=255) tCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CGT‑TT‑TTGCGTGGCGCAGTGAAAg > 1:687217/1‑140 (MQ=255) cccAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTGCGGTACGATGCG‑C‑TGTT‑TTGCATGGCGCAGTGAAAGc > 1:457994/1‑140 (MQ=255) ggCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGcc > 2:81689/1‑140 (MQ=255) tCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACAGTGGG‑C‑TGTT‑TTGCGTCGCGCGGTGAAAGCCTGCCGCAg > 2:530944/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCa > 1:1213701/1‑138 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCa < 2:1213701/138‑1 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 1:1006926/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:510846/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 2:1390409/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 1:178161/1‑140 (MQ=255) cACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgc > 1:1277974/1‑140 (MQ=255) aCTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGAGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgcg > 1:55190/1‑140 (MQ=255) tAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAgcggc < 1:870948/140‑1 (MQ=255) gacgacGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGgcgtgc < 2:800785/140‑1 (MQ=255) cgacgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGAGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGgcgtgcgt < 2:55190/140‑1 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg < 2:1299501/140‑1 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg < 1:800416/140‑1 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg < 2:1006926/140‑1 (MQ=255) acgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCg > 1:1207589/1‑140 (MQ=255) cgGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTACGTAGCGAAGTGAAAGACTGCCGCAGCGGCGTGCGTCGc > 2:438481/1‑140 (MQ=255) ggTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCa > 1:1289397/1‑125 (MQ=255) ggTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCt > 1:862111/1‑140 (MQ=255) ggTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCt < 2:829632/140‑1 (MQ=255) ggTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCAATTACAGCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCa < 2:1289397/125‑1 (MQ=255) tatTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCAt < 1:360219/140‑1 (MQ=255) tctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAAt > 1:938516/1‑140 (MQ=255) tctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAAt > 1:766800/1‑140 (MQ=255) ctcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCGGCAGCGACGTGCGTCGCTGTCATTTAATc > 1:516469/1‑140 (MQ=255) tcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGCAAGGCTGTCGCAGCGGTGTGCGTCGCTGTCATTTAATCa > 2:448162/1‑140 (MQ=255) tcCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCa > 2:110961/1‑140 (MQ=255) cGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAg < 1:881763/139‑1 (MQ=255) cGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAg > 2:881763/1‑139 (MQ=255) cGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGGGAAAGCCTGCCGCAACGGCGTCCGTCCCTGTCATTTAATCAGt > 2:1240465/1‑140 (MQ=255) gAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGtt < 1:309167/140‑1 (MQ=255) tCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTAGCTGTCATTTAATCAGTTATCAGGa > 1:595809/1‑140 (MQ=255) cGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgc > 1:1470726/1‑140 (MQ=255) aagcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCCCAGCGGCGGGCGGCGCTGTCATTTATTCAGTTATCAGGAAGATGgcgc > 2:527643/1‑140 (MQ=255) agcgcaagggcGGGTATGAGCCGAGGAAGATGATGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcg < 2:755135/140‑1 (MQ=255) agcgcaagcgcGGGTAGAAGCCTAGGAAGAGCAAGCCGAATACAACTCTGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcg < 2:516469/140‑1 (MQ=255) agcgcaagcgcGGGTAGAAGCCCAGTAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcg < 1:510846/140‑1 (MQ=255) agcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcg < 2:766800/140‑1 (MQ=255) agcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcg < 1:158888/140‑1 (MQ=255) gcgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGgcgcgc < 2:1277974/140‑1 (MQ=255) cgcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCt < 1:1051228/140‑1 (MQ=255) gcaagcgcGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCACTGTCATTTAATCACTTATCAAGAAGATGGCGCGCTg > 1:554626/1‑140 (MQ=255) gcgGGTAGAAGCCCAGGAAGAGCAAGGCGATAACATCTCGGGTACGGTACG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCaa < 2:554626/140‑1 (MQ=255) gcgGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCaa < 2:595809/140‑1 (MQ=255) cgGGTAGAAGCCCAGGAAGAGAAAGGCTATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATGTCATCAGTTATCCGGAAGATGGCGCGCTGCTGCAag > 2:168805/1‑140 (MQ=255) cgGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAag > 1:305603/1‑140 (MQ=255) ggTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAagag < 2:1207589/140‑1 (MQ=255) gCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTtct < 2:48693/140‑1 (MQ=255) cAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCAc > 1:255511/1‑140 (MQ=255) aGGAAGAGAAAGGCGATTACAATTCTGGTTCGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCAcg < 1:530944/140‑1 (MQ=255) aGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAag > 1:1540895/1‑127 (MQ=255) aGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAag < 2:1540895/127‑1 (MQ=255) ggAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCAcgc > 1:1543153/1‑140 (MQ=255) aaGAGAAAGGCGATTACCACTCTGGTACGGTCCGCC‑T‑TT‑CTGCGTGGCACAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 2:457994/140‑1 (MQ=255) aaGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 1:95500/140‑1 (MQ=255) aaGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 2:178161/140‑1 (MQ=255) aaGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 1:81689/140‑1 (MQ=255) agaAAGGCGATTACAAATCCGGGACGGTGCG‑CTT‑TT‑TTGAGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACgg < 2:687217/140‑1 (MQ=255) aGGCGATTACAACTCCGATACGATGCG‑C‑T‑TTGTTGTGTGCCGCAGTGACAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATc < 2:479467/140‑1 (MQ=255) cGATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGt > 2:1421895/1‑140 (MQ=255) gATTACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTa < 2:862111/140‑1 (MQ=255) ttACAACTCCGGTACTGTGCG‑CTT‑TT‑TTGAGTGGCGCCGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg < 1:448162/140‑1 (MQ=255) ttACAACTCCGGTACTGTGCG‑CTT‑TT‑TTGAGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg < 1:527643/140‑1 (MQ=255) ttACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg > 1:1169106/1‑140 (MQ=255) ttACAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg > 2:1536133/1‑140 (MQ=255) ttACAACTCCGGTACGCTGCG‑CTT‑TT‑TTGCAAGACACAGTGAAAGCCTACCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACg < 2:717928/140‑1 (MQ=255) aCAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa > 2:1475372/1‑125 (MQ=255) aCAACTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGa < 1:1475372/125‑1 (MQ=255) aaCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:110961/140‑1 (MQ=255) aaCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 2:938516/140‑1 (MQ=255) aaCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:1390409/140‑1 (MQ=255) aaCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 2:1169106/140‑1 (MQ=255) aaCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:1536133/140‑1 (MQ=255) aaCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 2:1543153/140‑1 (MQ=255) aCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCa > 1:778289/1‑137 (MQ=255) aCTCCGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCa < 2:778289/137‑1 (MQ=255) cGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGTCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa > 1:956412/1‑135 (MQ=255) cGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 2:956412/135‑1 (MQ=255) cGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 1:1342520/135‑1 (MQ=255) cGGTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa > 2:1342520/1‑135 (MQ=255) gTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGAt > 2:1258540/1‑140 (MQ=255) gTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGATGTTCTCCCGCTACAGTATCGCTACGCAGATTGTGAt > 1:717928/1‑140 (MQ=255) gTACGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGCACGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGAt > 2:1473228/1‑140 (MQ=255) cGGTGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGa > 1:782718/1‑140 (MQ=255) tGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCTAGAGTTGTTCTCACGCCACGGTATCTGTACGCAGATTGTGATGGAAAg > 2:587146/1‑140 (MQ=255) tGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa < 2:1314561/127‑1 (MQ=255) tGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGa > 1:1314561/1‑127 (MQ=255) tGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 2:143180/1‑140 (MQ=255) tGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 2:1512091/1‑140 (MQ=255) tGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAg > 1:120943/1‑140 (MQ=255) tGCG‑CTT‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCACACGCGAGGGTATCGGTACGCGGATTGTGATGGAAAg > 1:421167/1‑140 (MQ=255) | ATGATTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCG‑C‑T‑TT‑TTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAG > NC_000913/2949854‑2950122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |