| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 766,957 | (G)6→7 | coding (974/1977 nt) | mngA → | 2‑O‑alpha‑mannosyl‑D‑glycerate specific PTS enzyme II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 766,951 | 1 | . | G | 92.1% | 243.9 / 12.2 | 76 | coding (968/1977 nt) | mngA | 2‑O‑alpha‑mannosyl‑D‑glycerate specific PTS enzyme II |
| Reads supporting (aligned to +/- strand): ref base . (4/2); new base G (34/36); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
CCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑GG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTGATGGT > NC_000913/766814‑767083 | ccAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑gg > 1:1240904/1‑140 (MQ=255) aacaaGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGATGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑gg‑gg > 2:110646/1‑140 (MQ=255) acaaGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑gg‑gg‑g > 1:1147347/1‑140 (MQ=255) gcgcTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGATGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑gg‑gg‑g‑ggca < 1:110646/140‑4 (MQ=255) cgcTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑gg‑gg‑g‑ggcac > 1:1501144/1‑136 (MQ=255) cgcTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑gg‑gg‑g‑ggcac < 2:378245/140‑5 (MQ=255) cgcTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑gg‑gg‑g‑ggcac > 2:57383/1‑136 (MQ=255) cAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCg > 1:1453348/1‑140 (MQ=255) aaGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑GG‑GG‑GAGCACGGTGCTGGCgg > 1:453643/1‑140 (MQ=255) aGCGTAGCGATGAGACGCGTACCGTACAGCATGATACGCCACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGt < 2:474731/140‑1 (MQ=255) aGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGt < 1:124672/140‑1 (MQ=255) aGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGt < 1:142698/140‑1 (MQ=255) gCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTc < 1:38632/140‑1 (MQ=255) aGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCgg > 2:1306564/1‑140 (MQ=255) aTGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTAtt > 1:260685/1‑140 (MQ=255) agaCGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACt > 1:873019/1‑140 (MQ=255) agaCGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACt > 1:1033016/1‑140 (MQ=255) agaCGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGCCG‑C‑GG‑GGTG‑GCCCGATGCTGGGGGCCGCGGTATTACt > 1:737278/1‑140 (MQ=255) cgtaccgtacAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGTG‑GG‑GG‑G‑GCACGGTGCTGGCGGACGCGGGATTACTTTCGc > 2:589032/1‑140 (MQ=255) tacAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGGATTACTGTCGCCAATAtt > 2:1366580/1‑140 (MQ=255) cAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGTTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCACAAATCTTCg < 2:643430/140‑1 (MQ=255) cAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCg < 2:1033016/140‑1 (MQ=255) cAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACAGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCg < 1:302777/140‑1 (MQ=255) aGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCgg < 2:823758/140‑1 (MQ=255) aGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCgg < 2:254054/140‑1 (MQ=255) aGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCgg < 2:1240904/140‑1 (MQ=255) cAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGc > 2:295533/1‑140 (MQ=255) cAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGc < 2:332468/140‑1 (MQ=255) gATACGCAACCGGTGCAAAGTGCCATAACAGAGCTGACACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTAc < 1:424030/140‑1 (MQ=255) gATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCggg > 1:1280267/1‑136 (MQ=255) gATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCggg < 2:1280267/136‑1 (MQ=255) gATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGCATTACTGTTGGAAATCTTCGGGCTAc > 2:996315/1‑140 (MQ=255) tACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACaa > 1:1428415/1‑140 (MQ=255) tACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACaa > 2:1293305/1‑140 (MQ=255) cGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGa < 1:295533/140‑1 (MQ=255) gCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGAt > 1:1486458/1‑140 (MQ=255) gCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGAt < 1:1306564/140‑1 (MQ=255) gCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGAt < 2:1147347/140‑1 (MQ=255) aaCCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGGTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGCGCTGGCGGACGCCGTAATACTGTTGCACATATTTGGGGTACAAGATCt > 2:685108/1‑140 (MQ=255) ccGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCCCGGGATTACTGTCGCAAATCTACGGGCTACAAGATCTGt > 2:680539/1‑140 (MQ=255) gTGAAAAGTGTCAAATCGGAGCAGAAACACGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTa < 1:589032/140‑1 (MQ=255) gTGAAAAGTGTCAAAACGGAGCTGAAACAGGGACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGTGATCACTTTCGCAAATGTTCGAGCTACAAGATCTGTTTa > 2:498188/1‑140 (MQ=255) gTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTGTTACTGTAGCATATGTTCCGGATCCAAGATCTGTTTa > 1:718455/1‑140 (MQ=255) gTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTa > 1:836640/1‑140 (MQ=255) gTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTa > 2:12036/1‑140 (MQ=255) gAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGa < 1:50537/130‑1 (MQ=255) gAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGa > 2:50537/1‑130 (MQ=255) gtgtCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATgaaga < 1:1156808/140‑1 (MQ=255) tgtCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATgaagaa > 1:1339561/1‑140 (MQ=255) tCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGaaaa > 2:1162947/1‑140 (MQ=255) tCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGaaaa > 1:164748/1‑140 (MQ=255) tCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGaaaa > 1:1514509/1‑140 (MQ=255) tCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGGCGCGGTATTGCTGTCGCAAATCGTCGGGGTTCAAGGTCAGTTTTATGGAGaaaa > 2:1208336/1‑140 (MQ=255) aaaCGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTc < 1:1366580/140‑1 (MQ=255) aaCGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTcc < 1:1496149/140‑1 (MQ=255) aaCGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTcc < 1:57383/140‑1 (MQ=255) aaCGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTcc < 2:1486458/140‑1 (MQ=255) aaCGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTcc < 2:164748/140‑1 (MQ=255) ggAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTgg < 2:1339561/140‑1 (MQ=255) gAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGc < 2:1514509/140‑1 (MQ=255) gAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGc < 2:1453348/140‑1 (MQ=255) aaaCAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATgaagaa < 1:376895/124‑1 (MQ=255) aaaCAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATgaagaa > 2:376895/1‑124 (MQ=255) cTGTTGAGCGGAATCTCATTTGTCGTACCGTCGATTGTCT‑CGGG‑GG‑G‑GAACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCa < 2:453643/140‑1 (MQ=255) tGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCaa > 1:1088058/1‑140 (MQ=255) tGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCt < 2:1428415/140‑1 (MQ=255) aaTCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGggcggc > 2:196752/1‑140 (MQ=255) aaTCTCTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGggcggc > 2:342119/1‑140 (MQ=255) tctcTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGcggcgg > 1:334457/1‑140 (MQ=255) tctcTTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTAGCAAATCTTCGGGCTACAAGATCTGTATAATGAAGGAAAATCCAGGCTGTGGGTGTAACGCAAGCTGGGcggcgg > 2:432821/1‑140 (MQ=255) ctctTTTGCCGTACCTTTGATTATCC‑C‑GGCGG‑G‑GCACCGTGCTGGCGGTCGCGGTATTACTGTAGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCggg < 1:432821/140‑1 (MQ=255) ctctTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCggg < 1:996315/140‑1 (MQ=255) ctTTTGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGgct < 1:141254/140‑1 (MQ=255) ttGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGgctgct < 1:342119/140‑1 (MQ=255) ttGCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGgctgct < 2:836640/140‑1 (MQ=255) gCCGTACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTCCTGTCGCAAATCCTCGGGGTACAAGATCTGGTTAATGAAGAAAACTCCGGGCGGTGGATGTTCCGTAAGCGGGGCGGCGGGCTGCTcc > 2:393771/1‑139 (MQ=255) tACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGGTACAAGATCTGTTTAATGAAGAAAAATCCTGGCAGTGAATGGACCCCAAGATGGGTGGCGGGCCGCTCGGAAt > 2:600848/1‑140 (MQ=255) tACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGGTGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAAt > 2:1297244/1‑140 (MQ=255) tACCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAAt > 2:855371/1‑140 (MQ=255) tACCGTTGATTGTCG‑C‑GG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAAATCCTGGCTTTGGTTGTTCCGCAAGCTGGGGTGCGGGCTGCTCGGAAtt > 2:541307/1‑140 (MQ=255) aCCGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAAtt < 1:1293305/140‑1 (MQ=255) cGTTGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAAtttt < 1:1208336/140‑1 (MQ=255) ttGATTGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGGATTACTGTCGCAAATCTTCGGGCTACAAGATCTGGTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTgg > 2:1497241/1‑139 (MQ=255) ttGATTGTCG‑C‑GG‑GGTG‑GCACGTTGCTGGTGGTCGCGCTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTGa < 1:393771/140‑1 (MQ=255) ttGATTGTCG‑C‑GG‑GGCG‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTGa < 1:685108/140‑1 (MQ=255) ttGTCG‑CGGG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTGATGGt < 2:334457/140‑1 (MQ=255) | CCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCG‑C‑GG‑GG‑G‑GCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTGATGGT > NC_000913/766814‑767083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |