| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 1,318,571 | (C)6→9 | coding (1218/1362 nt) | trpC ← | fused indole‑3‑glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1318565 | 3 (0.030) | 55 (0.610) +CCC |
34/258 | 1.0 | 94.8% | coding (1224/1362 nt) | trpC | fused indole‑3‑glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
| ? | NC_000913 | 1318566 = | 3 (0.030) | coding (1223/1362 nt) | trpC | fused indole‑3‑glycerol phosphate synthase/phosphoribosylanthranilate isomerase | |||||
TAATATGCGCGCAGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAG‑‑CCC‑CC‑CGCCAGCAGAACGTTGCCAAGCGATTGACCATTTAATAGTGACCAGTCAAAACGTTGCCCGCTTCCACCCTGGCCGTTGTCTAAAACATATTTATCAACGTGCTGAAACTCGCGGGCGGGCAGGGT > NC_000913/1318428‑1318696 | tAATATGCGCGCAGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGcc > 1:1367831‑M1/1‑138 (MQ=255) atatGCGCGCAGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTTTGCTGCTTCCACGCAGTTATCTGCGCCTAAGcccc > 2:611928‑M1/1‑136 (MQ=255) tatGCGCGCAGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccc > 2:1375270‑M1/1‑135 (MQ=255) cgcgcAGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccg > 2:1300180‑M1/1‑131 (MQ=255) gcgcAGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGcccccccccg > 1:770616‑M1/1‑130 (MQ=255) gcgcAGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGACGGTTTGTTCCGCTTCAACGCAGTTGTCTGCGCCTAAGccccccccgc > 2:609738‑M1/1‑130 (MQ=255) aGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagc > 2:1042132‑M1/1‑126 (MQ=255) aGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagc > 2:1350005‑M1/1‑126 (MQ=255) gCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgat > 1:798151‑M1/1‑108 (MQ=255) gCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgat > 2:1344536‑M1/1‑108 (MQ=255) aaaaGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattga < 2:1367831‑M1/140‑36 (MQ=255) aaaaGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattga < 1:44015‑M1/140‑36 (MQ=255) aaaaGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattga < 2:798151‑M1/140‑36 (MQ=255) aaaaGACGTGCGTCTTTGATGCCCGCTTGTGACTCTAAAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattga < 1:609738‑M1/140‑36 (MQ=255) aaaaGACGTGCGTCTCTGATGCCCGGTTGCGCCTCTAAAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattga < 1:569416‑M1/140‑36 (MQ=255) aaaGGCGTGTGTTTTTGATGCCCGATTCCGACTCTACAGCAGAATAAAAACAAAGCCCGGCCCTGCCGGTTTGGGCCCCTTCCACGCAGTTTTCTGCGCCTAAGCCCCC‑CC‑CGCCAGCAGAACGTTGCCAAGCGATTGAc < 2:962352/140‑1 (MQ=255) aaaGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGcccccccccgccagcagaacgttgccaagcgattga < 1:1422715‑M1/140‑37 (MQ=255) aCGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatt < 1:1350005‑M1/140‑41 (MQ=255) gTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagtactttgccaagcgattgaccattta > 1:464683‑M1/1‑98 (MQ=255) gATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagctgaacgttgccacgccattgacaatttaatagtgacca > 1:756555‑M1/1‑88 (MQ=255) cGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaatgttcccaagcgattgaccattgaatagtgaccagtcaaa > 2:507416‑M1/1‑82 (MQ=255) cGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacggtgccaagagattgatcatttaatagtgaccagtcaaa > 1:610500‑M1/1‑82 (MQ=255) cGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgctgccaagcgatcgaccatttactagtgaccctgtctc > 1:739865‑M1/1‑82 (MQ=255) gTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaac > 2:351958‑M1/1‑80 (MQ=255) gTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaac > 2:1117300‑M1/1‑80 (MQ=255) ttGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacg > 2:1439168‑M1/1‑79 (MQ=255) cctctaCAGCAAAATTAAAATCTAGCCCGGCTCAGGCGGCTTGTGCCGCTCCCCCGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcc < 2:464683‑M1/139‑67 (MQ=255) cctctaCAGCAAAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTCCCGCTTCCCCGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcc < 2:1047283‑M1/139‑67 (MQ=255) aCTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcc < 1:1117300‑M1/140‑67 (MQ=255) agcagAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttcc > 1:120351‑M1/1‑67 (MQ=255) aaTTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccct > 2:1202961‑M1/1‑62 (MQ=255) aaTTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgccccttccaccctg > 2:222806‑M1/1‑62 (MQ=255) ttAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctgg > 2:927881‑M1/1‑60 (MQ=255) aaaTCAAGTCCGGCGGAGCCGGGTTCTGCTGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccg < 1:681860‑M1/140‑84 (MQ=255) aaaTCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccg < 1:1202961‑M1/140‑84 (MQ=255) aaTCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgt < 1:1439168‑M1/140‑85 (MQ=255) aaTCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGcccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccacttccaccctggccg < 2:770616‑M1/140‑85 (MQ=255) cAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgt < 2:120351‑M1/140‑88 (MQ=255) cAAGCCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgt < 1:973354‑M1/140‑88 (MQ=255) aaGTCCGGCGCAGCCGGTTTGTGCGGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtc > 2:1433868‑M1/1‑52 (MQ=255) aGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtct > 1:1316927‑M1/1‑51 (MQ=255) gTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccattcaaaacgttggccgcttccagcctggccgttgtcta > 1:433926‑M1/1‑50 (MQ=255) gTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtcta < 1:1344536‑M1/140‑91 (MQ=255) cccgGCGCAGCCGGTCTGTGCCACTTCCACGCAGTTAGCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaa < 1:531129‑M1/139‑92 (MQ=255) ccGGCGCAGCCGGTTTGTGCCGATCCCACTCAGTTATTTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaa < 1:567578‑M1/140‑93 (MQ=255) cGGCGCAGCCGGTTTGTACCGCCTCCACGCATTTATCTGCGCCTAAGctccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaa < 2:610500‑M1/140‑94 (MQ=255) gCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatattt > 1:1161556‑M1/1‑40 (MQ=255) gTTTGTGCCGCTTCCTCGCAGTTATTTGCTCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatca < 1:611928‑M1/140‑105 (MQ=255) gCAGTTATCTGCGCCGAAG‑‑CCCGCCGCGCCAGCAGAACGTTGCCAAGCGATTGACCATTTAATAGTGACCAGTCAAAACGTTGCCCGCTTCCACCCTGGCCGTTGTCTAAAACATATTTATCAACGTGCTGAAACTcgcg < 1:722260/140‑1 (MQ=255) aGTTATCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatcaacgtgctgaaactcgcggg < 1:26020‑M1/140‑124 (MQ=255) aTCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaacaaatatttatcagcgtgctgaaactcgcgggcggg > 2:722260‑M1/1‑13 (MQ=255) aTCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatcaacgtgctgaaactcgcgggcggg > 2:1038014‑M1/1‑13 (MQ=255) aTCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatcaacgtgctgaaactcgcgggcggg < 1:1319918‑M1/140‑128 (MQ=255) aTCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatcaacgtgctgaaactcgcgggcggg > 2:1319918‑M1/1‑13 (MQ=255) aTCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccacttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatcaacgtgctgaaactcgcgggcggg > 2:1495598‑M1/1‑13 (MQ=255) tCTGCGCCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatcaacgtgctgaaactcgcgggcgggc < 1:1042132‑M1/140‑129 (MQ=255) tGCGCCTAAGC‑CCC‑CC‑CGCCAGCAGAACGTTGCCAAGCGATTGACCATTTAATAGTGACCAGTCAAAACGTTGCCCGCTTCCACCCTGGCCGTTGTCTAAAACATATTTATCAACGTGCTGAAACTCGCGGGCGGGCAgg > 1:153887/1‑140 (MQ=255) gcCTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatcaacgtgctgaaactcgcgggcgggcagggt > 2:1442856‑M1/1‑7 (MQ=255) ccTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgtctaaaacatatttatcaacgtgctgaaactcgcgggcgggcagggtt > 2:1424669‑M1/1‑6 (MQ=255) cTAAGccccccccgccagcagaacgttgccaagcgattgaccatttaatagtgaccagtcaaaacgttgcccgcttccaccctggccgttgactaaaacatattgatctacgtgctggaactagcgggcgggcagggttt > 2:457842‑M1/1‑5 (MQ=255) | TAATATGCGCGCAGCGTCTGGAAAACCGAGGCCAAAAGACGTGCGTCTTTGATGCCCGGTTGCGACTCTACAGCAGAATTAAAATCAAGTCCGGCGCAGCCGGTTTGTGCCGCTTCCACGCAGTTATCTGCGCCTAAG‑‑CCC‑CC‑CGCCAGCAGAACGTTGCCAAGCGATTGACCATTTAATAGTGACCAGTCAAAACGTTGCCCGCTTCCACCCTGGCCGTTGTCTAAAACATATTTATCAACGTGCTGAAACTCGCGGGCGGGCAGGGT > NC_000913/1318428‑1318696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |