| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 646,747 | 0 | T | G | 26.5% | 137.4 / 22.6 | 69 | T255P (ACC→CCC) | citG | triphosphoribosyl‑dephospho‑CoA synthase |
| Reads supporting (aligned to +/- strand): ref base T (3/47); new base G (18/0); total (21/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.04e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTT > NC_000913/646616‑646884 | cAAGTGCTTAAATAATTTAATCCGTGCTAAATACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑Gc < 2:564645/140‑1 (MQ=255) tGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑Gcccc < 2:199739/139‑1 (MQ=255) tGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑Gcccc > 1:199739/1‑139 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCGCTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGa < 1:1018140/130‑1 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCGCTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGa > 2:1018140/1‑130 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATAGAGATCGGC‑GGGGGGTTGAAT‑Gcccccct > 1:564645/1‑138 (MQ=255) ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCttt < 2:196340/140‑1 (MQ=255) ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACGGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCttt < 2:1254206/140‑1 (MQ=255) atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAA‑GCCCCCctttttgaaa > 1:342700/1‑135 (MQ=255) ttAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCaata < 1:220994/140‑1 (MQ=255) cTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGttt < 1:1343531/140‑1 (MQ=255) gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGTAT‑GCCCCCCTTTTTTGATAATGttttt > 1:1160316/1‑138 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTgcg > 1:1190472/1‑140 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGGCCCCCTTTTTTC‑ATAATAtttttg > 2:1090468/1‑137 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAA‑GCCCCCCTTTTTCAATAATGTTTtcg > 1:822849/1‑140 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTTAATAATGTTTtcg > 2:772904/1‑140 (MQ=255) gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCCTCAA‑GCCCCC‑TTTTGTTATAATGTTTtcgc > 2:20184/1‑140 (MQ=255) gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑TCCCCCCTTTTTCAATAATGttttctc > 1:1003719/1‑136 (MQ=255) cTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGcc < 2:249614/140‑1 (MQ=255) aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc < 2:1469836/140‑1 (MQ=255) aaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTGCTAAT‑GCCCCCCTTTTTGAAAAAAGTTTTCGccccc > 1:374218/1‑137 (MQ=255) aaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGccccc > 1:211721/1‑137 (MQ=255) ggTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTCTTTTCACAATGTTCTCGCCCCCCGCTGTa > 1:514703/1‑140 (MQ=255) tAAGGATCAGTAGGTCAGCACTTCCGCCTGGGCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc < 2:560698/140‑1 (MQ=255) tAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc < 2:257531/140‑1 (MQ=255) tAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc < 2:1458385/140‑1 (MQ=255) aTCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgcg < 1:772904/140‑1 (MQ=255) tCAGTAGGTCAGCACGGCCGCCCGGCCTGGGATTTCGCTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgcgc < 1:564888/140‑1 (MQ=255) cAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCa < 2:353775/140‑1 (MQ=255) aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGGTGAAT‑GCCCCCCTTTTTCAATAATATTTGTGCCTCCCCCTGTGGCCAGCGCAg > 2:244628/1‑140 (MQ=255) aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGACGGAGATAATCGAGATCGGC‑GGGGGGGTGGAT‑GGACCCCTTTTTCGCTAAAGTTTTTGCCCCCCCCTGTAGGCAgcgggg > 2:1460737/1‑137 (MQ=255) gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAGCTGCCTGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAgg < 1:1460737/140‑1 (MQ=255) gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑GTCCCCCTTTTTCCATAATGGTTTCGCCTCCCGCCGTTGCCAGGGCAgg > 2:857328/1‑140 (MQ=255) gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑GGCCCCCTTTTTTAATAATTTTTTTGCCCCGCGCTGTTGCCCGCGCAgg > 1:936213/1‑140 (MQ=255) tCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATTTTTTAGCCCCCGGCTGTAGCCAGCGCAGG‑ccccc > 1:662989/1‑140 (MQ=255) tCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTTAATAATGTTTTCGCCCCGCGCTGTAGCCAGCGCAGG‑ccccc > 1:71196/1‑140 (MQ=255) cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCCCCCGCCGTAGCCAGCGCCGG‑cccccc > 1:970588/1‑140 (MQ=255) cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GGCCCCCTTTTTCAATAATTTTTTCGCCCCGCGCCGTAGCCCGCGCAGG‑gcccccccc > 2:1115873/1‑137 (MQ=255) cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTCTATAAAGTTTTCGCCCCGCGCTCTAGCCCGCGCAGG‑ccccccccc > 2:85943/1‑137 (MQ=255) cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATTATTTCGCCCCCCACCCTGGCCATCGCAGG‑ccccccccc > 1:642392/1‑137 (MQ=255) cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GGCCCCCTTTTTCAATAAAGTTTGTGCCTCGCTCTGTAGGCAGCGCAGG‑ccccccccc > 2:867449/1‑137 (MQ=255) tGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCa < 2:1190472/140‑1 (MQ=255) gccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAA‑GGCCCCCTTTTTTTATAAAATTTTCGCCCCCCGCCGTTGCCCGCGCACG‑ccccccccccccc > 2:1420558/1‑133 (MQ=255) ccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGCAT‑GCCCCCCTTTTTCTATAATTTTTTTACCTCGCGACGTAGGAAGCGCAAG‑GCCCCCCCGCcccc > 1:756988/1‑140 (MQ=255) ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACcgcg < 1:147530/140‑1 (MQ=255) ccTGGACTGAGATTTCGCTCGAAACACTCCCAGTCAAACAGCCGGAGAAAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACcgcg < 2:497568/140‑1 (MQ=255) aCTGAGATTTCGTTCGATACACTCCCTGTCGTACTTCCGCAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATg < 2:642392/140‑1 (MQ=255) aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATg < 1:897148/140‑1 (MQ=255) aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATg < 1:20184/140‑1 (MQ=255) cTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGc < 2:766432/140‑1 (MQ=255) caggaTTTCGTTCGAAACACTCCCTATCGAACTGCCGAAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCa < 1:693478/137‑1 (MQ=255) gagaTTTCGTTCGATACCCTCCTTGTCGAACGGGCGGAGATAATCGAGCTCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCaa < 2:662989/140‑1 (MQ=255) agaTTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAAc < 1:951886/140‑1 (MQ=255) aTTTCGTTCGATACACTCCCTGTCGGACTTCCGGAGACAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGt < 1:530703/140‑1 (MQ=255) tttCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGtt < 1:1264581/140‑1 (MQ=255) cgttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATATTTTCGCCTCCCGCCGTAGCCAGCGCAGG‑CCCCCCCCCCCACCCCGCGGTGCCACGGTggg > 2:979/1‑139 (MQ=255) gttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTa < 1:857328/140‑1 (MQ=255) cTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGa < 1:12410/140‑1 (MQ=255) ccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCCGTAGCCAGCGCCGG‑CCCCCCACCCTCCCCCCCCGTGCAACGTGGGGGTCGCCGTTGGTCg > 2:586401/1‑140 (MQ=255) tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGcc < 2:1167721/140‑1 (MQ=255) tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGcc < 1:244628/140‑1 (MQ=255) tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGcc < 1:1420558/140‑1 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCTTTTTTC‑ATAATGTTTTCGCCCCCCCCCGTAGCCAGCGCAGG‑CCCCCCCCGCCCCCCCGCGATGCAACGTTGGGATCGCCGTTTTTCGCCac > 2:181755/1‑139 (MQ=255) tCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATTTTTTCGCCCCGCGCCGTAGCCAGCGCAGG‑CCCCCCCCCCCCCCCCGCTCGGCCACGATGGGCTCGCCGTTGATCGcccc > 2:730628/1‑138 (MQ=255) aaCTGCCGGAGATAATCGAGATCGGC‑GGGGGGGCGAAT‑GTCCCCCTTTTTCCATAATGTTTTTGCCCCGCGCTGTAGCCAGGGCAGG‑GCCCCCCCCCCACCCCGCGCTGCAACGCTGGGATCGCCGGTGATCGcccgccg > 2:328482/1‑135 (MQ=255) aCTGCCGGAGATAATCGCGATCGGC‑GGGGGTGCGAGT‑GCACCCTTTTTCCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt < 2:492672/140‑1 (MQ=255) aCTGCCGGAGATAATCGAGATCGGC‑GGGGGCTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt < 1:1082826/140‑1 (MQ=255) tGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg < 1:1115873/140‑1 (MQ=255) tGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg < 1:1378647/140‑1 (MQ=255) tGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCACGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg < 2:970588/140‑1 (MQ=255) tGCCGGAGATAATCGAGATCGGC‑GGGGGGGCGCAT‑GCCCCCCTTTTTTAATAATTTTTTTGCCCCGCGCCGTAGCCAGCGCCGG‑CCCCCCCCCCCCCCCCCCCATGCAACGATGGTATCGCCCGTGATCGCCCTCACTAg > 2:1082826/1‑140 (MQ=255) ccGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGa < 1:1090468/140‑1 (MQ=255) cGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAg < 1:1457828/140‑1 (MQ=255) gagaTAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGGGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa < 1:993449/140‑1 (MQ=255) gagaTAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa < 2:1131549/140‑1 (MQ=255) gagaTAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa < 2:211721/140‑1 (MQ=255) ggaTAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCTATCAGTAGGAGCa < 1:1300838/139‑1 (MQ=255) gaTAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAg < 2:936213/140‑1 (MQ=255) aTCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTCTATAAAGTTTGGGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCCCCCCCCCCCCCGATGCAACGTTGGGGTCGCCGGTGGTTGCCCTCCGTAGGGGCAAAGGATCGAGcc > 2:993449/1‑139 (MQ=255) gc‑ggGGGTTCGAAT‑GCCCCCTTTTTCCAATAATGTTTTCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCTAGCAATGc < 1:586401/140‑1 (MQ=255) ggTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGtt < 2:1173202/140‑1 (MQ=255) ggTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGtt < 2:1160316/140‑1 (MQ=255) | CAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTT > NC_000913/646616‑646884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |