| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,321,433 | T→C | V464A (GTT→GCT) | atoS → | sensory histidine kinase AtoS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,321,433 | 0 | T | C | 99.2% | 415.5 / NA | 118 | V464A (GTT→GCT) | atoS | sensory histidine kinase AtoS |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (50/67); total (50/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
GTGACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGTTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGAT > NC_000913/2321298‑2321568 | gTGACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTgaa > 2:274870/1‑140 (MQ=255) tGACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTgaaa > 2:340815/1‑139 (MQ=255) gACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTgaaga < 1:1030936/140‑1 (MQ=255) gACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTgaaga < 1:1278630/140‑1 (MQ=255) gACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTgaaaa < 1:340815/140‑3 (MQ=255) aaTACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTgaaga > 1:3573/1‑135 (MQ=255) aaTACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTgaaga < 2:3573/135‑1 (MQ=255) aCATCAGGAATATCTGGCCGTATTACTCAAGGAGAGCGATTCAATTAAGAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctgg < 2:710122/140‑1 (MQ=255) aTCAGGAATATCTGTCCGTAGTTCTCAAAGAAATCTATTCAATTAACACAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggta < 2:510883/140‑1 (MQ=255) aTCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggta < 1:274870/140‑1 (MQ=255) aTCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATACAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggta < 1:357850/140‑1 (MQ=255) cAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggtact > 1:1096510/1‑140 (MQ=255) cAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggta > 2:1418744/1‑138 (MQ=255) cAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggta < 1:1418744/138‑1 (MQ=255) aGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACACGTCTGACTGAATGCATGGGCTCAAGAAACTatggtactg > 2:736956/1‑140 (MQ=255) aGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGGCAGCCTCAATGTATTGGCTGAAGAAACTctggtactg > 1:510883/1‑140 (MQ=255) aGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCACGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggtactg > 1:1548044/1‑140 (MQ=255) gAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggtactggt > 2:137039/1‑140 (MQ=255) atatCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGGATTGGCAGAAGAAACTCtggtactggtac > 1:561098/1‑140 (MQ=255) atatCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggtactggta > 2:1322343/1‑139 (MQ=255) atatCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTctggtactggta < 1:1322343/139‑1 (MQ=255) atatCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCtggtactggtac > 1:890501/1‑140 (MQ=255) ccGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGGATTGGCTGAAGCAATTCTGGTACTGGTACAAAccgcc > 1:737213/1‑140 (MQ=255) ccGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAAccgcc > 2:1053550/1‑140 (MQ=255) agtaCTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCg > 1:926703/1‑140 (MQ=255) agtaCTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTAGCTGAAGAAACGCTGGTACTGCTACAAACCGCCGGCg > 1:592273/1‑140 (MQ=255) taCTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTa > 2:102544/1‑140 (MQ=255) tCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACaa > 1:146221/1‑140 (MQ=255) tCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACaa > 2:1258247/1‑140 (MQ=255) aaaTCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCgg < 2:1091226/140‑1 (MQ=255) aaTCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCggg > 2:67974/1‑140 (MQ=255) aaTCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCggg > 1:229223/1‑140 (MQ=255) aaTCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCggg < 2:1020573/140‑1 (MQ=255) tCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTc < 1:1041855/140‑1 (MQ=255) tCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTc > 1:1245065/1‑140 (MQ=255) cGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCg < 1:67974/140‑1 (MQ=255) tAACAAAGTTATTCAGCGATTGTTCGAATTTTCACGTCCCCGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATaa < 2:592273/140‑1 (MQ=255) tAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATaa < 1:102544/140‑1 (MQ=255) tAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATaa < 1:1053550/140‑1 (MQ=255) aCAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGc > 1:1512464/1‑140 (MQ=255) aaaGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGa < 1:886334/140‑1 (MQ=255) aaGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGaa < 2:1180612/140‑1 (MQ=255) aaGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGaa < 1:918638/140‑1 (MQ=255) aaGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGaa < 2:229223/140‑1 (MQ=255) aaGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGaa < 2:28500/140‑1 (MQ=255) aaGTTATTCAGCAATAGCTCGATTTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGaa < 1:736956/140‑1 (MQ=255) aGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCC‑GCGTACAAGCGCGGGTCGACTTCATAAGCGAACt < 1:1163145/140‑1 (MQ=255) gTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACt < 2:338479/140‑1 (MQ=255) tATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTgg < 2:1252255/140‑1 (MQ=255) ttCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGAt > 2:1223753/1‑140 (MQ=255) tCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATa > 2:300628/1‑140 (MQ=255) tCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATa > 2:1097586/1‑140 (MQ=255) cAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATaa < 2:59697/140‑1 (MQ=255) cAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATaa < 1:1223753/140‑1 (MQ=255) cAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATaa > 1:940855/1‑140 (MQ=255) cAGCAATTGCCCAAATTTACAGGTCCAGACGCCAGTCAATGGCACCAAGTCAGCGTTAATGCATTGGCGGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGAGAACTGGATaa < 2:1447109/140‑1 (MQ=255) aGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAAt > 1:1323681/1‑140 (MQ=255) cAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGa > 2:804815/1‑140 (MQ=255) aTTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCATACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAAt > 2:229706/1‑140 (MQ=255) ttGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAAtt < 2:1467519/140‑1 (MQ=255) ttGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAAtt < 2:1396316/140‑1 (MQ=255) cGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGc < 2:146221/140‑1 (MQ=255) cGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCATACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGc < 1:229706/140‑1 (MQ=255) ccACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGa > 2:901202/1‑140 (MQ=255) cGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCg > 2:1357663/1‑140 (MQ=255) ccACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTg < 2:135167/140‑1 (MQ=255) cacaGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGa < 1:901202/140‑1 (MQ=255) cacaGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGa < 1:137039/140‑1 (MQ=255) acaGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGaa < 2:1548044/140‑1 (MQ=255) acaGTCAATGGCAACAACTCAGCCTCAATGTGTGGACTGCAGAAACTCCGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGaa < 2:737213/140‑1 (MQ=255) caGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGc > 2:830647/1‑129 (MQ=255) caGTCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGc < 1:830647/129‑1 (MQ=255) tCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGc < 1:132208/126‑1 (MQ=255) tCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGc > 2:132208/1‑126 (MQ=255) tCAATGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGc > 2:1079607/1‑140 (MQ=255) aTGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCa > 2:840064/1‑140 (MQ=255) tGGCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGc < 2:915586/122‑1 (MQ=255) ggCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGCATTAAGCGCGATTAGCGCCGAACGTGAACTGCTCaaa > 1:494118/1‑140 (MQ=255) ggCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGa > 2:1280335/1‑130 (MQ=255) ggCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGa < 1:1280335/130‑1 (MQ=255) ggCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCaaa < 2:890501/140‑1 (MQ=255) ggCAACAAGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGCACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCaaa < 2:1096510/140‑1 (MQ=255) aacaaGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAg > 2:214195/1‑140 (MQ=255) aacaaGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAg > 2:1160984/1‑140 (MQ=255) acaaGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAgg < 1:1097586/140‑1 (MQ=255) acaaGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAgg < 1:1433028/140‑1 (MQ=255) acaaGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAgg < 2:117704/140‑1 (MQ=255) caaGTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGt > 1:331585/1‑140 (MQ=255) gTCAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGtact < 1:808283/140‑1 (MQ=255) gTCAGCCTCAATGCATTCGCTGCAGAAACTCTGTTCCTGATACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGtact < 2:698734/140‑1 (MQ=255) aagacagtCAATGCAATGGCTGCAGAAACACTGGTACAGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGtact < 1:747980/133‑1 (MQ=255) cAGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGTCGACCGTGAACTGATCAAACAGGtactac > 1:698734/1‑140 (MQ=255) aGCCTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTactact < 2:1512464/140‑1 (MQ=255) ccTCAATGCATTGGTTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGa < 1:300628/140‑1 (MQ=255) ccTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGa < 1:1357663/140‑1 (MQ=255) ccTCAATGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGa < 2:1193452/140‑1 (MQ=255) aTGCATTGGCTGAAGAAACTCTTGTTCTGCTACAAACTGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATc < 1:496708/140‑1 (MQ=255) aTGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATc < 1:1079607/140‑1 (MQ=255) aTGCATTGGCTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATc < 2:331585/140‑1 (MQ=255) ttGGCTGAAGAAACTCTGGTACGGGTACAAAGCGCCGGCGTACAAGCGTGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGAt < 2:625193/140‑1 (MQ=255) | GTGACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGTTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGAT > NC_000913/2321298‑2321568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |