| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,342,105 | T→C | T689A (ACC→GCC) | yfaL ← | putative autotransporter adhesin YfaL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,342,105 | 0 | T | C | 99.0% | 342.1 / ‑5.0 | 99 | T689A (ACC→GCC) | yfaL | putative autotransporter adhesin YfaL |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (45/53); total (46/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
TGTCGATAGTGCCGCTGGAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGTGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTGCGCCCCACT > NC_000913/2341973‑2342239 | tGTCGATAGTGCCGCAGGAAATAGCGTCATTTGACTGTATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCcttct < 1:644407/140‑1 (MQ=255) aGTGCCGCTGGAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGacac > 1:149813/1‑140 (MQ=255) tGCCGCTGGAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGt > 2:987159/1‑140 (MQ=255) ccGCTGGAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTAc > 2:1358790/1‑140 (MQ=255) cTGGAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTAccgc > 2:1298492/1‑140 (MQ=255) ggAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTAccgccg > 1:996048/1‑140 (MQ=255) gAAATAGCATCAATTTACTGAAAATACTGCTCCGCGCTAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGa < 1:428752/140‑1 (MQ=255) gAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGa < 1:954648/140‑1 (MQ=255) gAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGa < 1:1167069/140‑1 (MQ=255) cAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACGTCACCTTTAAGGACGCATTCTTCGAAACGTACCGCCGACTGCGTTGTa > 2:542695/1‑140 (MQ=255) cAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTa > 2:52801/1‑140 (MQ=255) aTTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATGACCTTTCAGGGCTCCTGCTTCGACAAGTACTGCCGACTGCGTTGTAcc > 2:428752/1‑140 (MQ=255) aTTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTAcc > 2:322626/1‑140 (MQ=255) aTTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTAcc > 2:1238412/1‑140 (MQ=255) atatCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGt < 1:1238412/140‑1 (MQ=255) atatCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGt < 2:344834/140‑1 (MQ=255) atatCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGt < 1:809559/140‑1 (MQ=255) tatCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGTGCGCCTTCTTCGGCACGTACCGCCGTCTGCATTGTACCGCTGGCGGTc > 2:432556/1‑140 (MQ=255) tCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAg < 2:149813/140‑1 (MQ=255) tCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAg < 1:1153713/140‑1 (MQ=255) tCCTGATCCGCGCCACTAACGAACGTTGCCCCATCACAAACCCACAGTGACGAAACATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAg < 1:616196/140‑1 (MQ=255) tGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTc > 1:857066/1‑140 (MQ=255) tGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTc < 2:1507788/140‑1 (MQ=255) tGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTc < 1:1304133/140‑1 (MQ=255) gATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTcc > 1:320562/1‑140 (MQ=255) aTCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCa < 2:1296766/140‑1 (MQ=255) aTCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCa < 1:322626/140‑1 (MQ=255) aTCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCACTGGCGGTCAGCTCCa < 1:1351736/140‑1 (MQ=255) tCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAg > 1:62866/1‑134 (MQ=255) tCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAg < 2:62866/134‑1 (MQ=255) tCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAg > 1:1067794/1‑140 (MQ=255) tCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAg > 1:314505/1‑140 (MQ=255) tCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAg > 1:315070/1‑140 (MQ=255) ccGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAg > 2:54875/1‑139 (MQ=255) ccGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAg < 1:54875/139‑1 (MQ=255) cgcCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTa > 1:1180431/1‑140 (MQ=255) cgcCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTa > 1:1479953/1‑140 (MQ=255) cgcCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTACGTTGTACAGCTGCCGGTCAGCTCCAGTGTa > 2:560075/1‑140 (MQ=255) gTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGc > 1:964318/1‑140 (MQ=255) aacgaacgTTGCCCCGTCACCAACCGACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGccc < 1:654552/140‑1 (MQ=255) aacgaacgTTGCCCCATTACCACCCCACAGTTACGAAGCTTAAGGAAGTATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGccc < 2:453702/140‑1 (MQ=255) aacgaacgTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGccc < 1:1298492/140‑1 (MQ=255) aacgTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGTTCGGCTCCAATGTACCAGCCCCCGt > 1:453702/1‑140 (MQ=255) acgTTGCCCCATCACCACCCCACAGTGACGACGCACAAGTAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGtt < 2:441354/140‑1 (MQ=255) gTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGtttt < 1:52801/140‑1 (MQ=255) tGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAg > 2:1226086/1‑140 (MQ=255) tGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCACTGGCGGACAGATCGAGTGTATCAGCCCCCGTTTTAg > 1:441354/1‑140 (MQ=255) ccccATCCCCAACCCACAGTGACGAAGCAT‑AGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCa < 1:1119115/140‑1 (MQ=255) ccccATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTc < 2:964318/140‑1 (MQ=255) cccATCACCAACCCAGAGTGACTAATCATCAGGAAGGGTATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCa < 1:724765/140‑1 (MQ=255) cccATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCa < 1:1092810/140‑1 (MQ=255) cccATCACCAACCCACAGTGACCAATCATCAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCa < 1:432556/140‑1 (MQ=255) cccATCACCAACCCACAATGACTAAGCATAACGAAAGATCTCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCa < 2:494733/140‑1 (MQ=255) aTCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTGCCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAAtg < 1:1280047/140‑1 (MQ=255) tCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGATTTAGTCAAtgt > 2:989628/1‑140 (MQ=255) cACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAAtggg < 2:996048/140‑3 (MQ=255) aCCAACCCACAGTGATGAAGCACAACGAATGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGc < 1:542695/140‑1 (MQ=255) aCCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGc < 1:1226086/140‑1 (MQ=255) aCCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGc < 1:1358790/140‑1 (MQ=255) aCCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGc < 2:320562/140‑1 (MQ=255) aCCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGc < 2:315070/140‑1 (MQ=255) aCCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGc < 2:314505/140‑1 (MQ=255) aCCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGc < 1:1474118/136‑1 (MQ=255) aCCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGc > 2:1474118/1‑136 (MQ=255) aCCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTAcc > 2:1535817/1‑140 (MQ=255) cccACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCa > 1:960644/1‑129 (MQ=255) cccACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCa < 2:960644/129‑1 (MQ=255) ccACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCt < 1:987159/140‑1 (MQ=255) caGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCAt > 1:86785/1‑140 (MQ=255) caGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCAt > 1:1509109/1‑140 (MQ=255) aCGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGa > 1:301345/1‑140 (MQ=255) cGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGAt > 1:88733/1‑140 (MQ=255) cGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGAt > 1:305333/1‑140 (MQ=255) gAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGAtg < 2:1075712/140‑1 (MQ=255) aGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGAtgct < 2:1067794/140‑1 (MQ=255) aGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGAtgct < 2:857066/140‑1 (MQ=255) cATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTAccc < 1:841599/125‑1 (MQ=255) cATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTAccc > 2:841599/1‑125 (MQ=255) cATAAGGAAGGATATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGAtgctgc < 2:1180431/140‑1 (MQ=255) aTAAGGAACGATATCACAAACATCACCTTTGAGGGCGCCCTCTTCGACCCGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGcc < 2:750704/140‑1 (MQ=255) gaTATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTGAATGTGCCACCATCCTCCTGAAGCTGCCCGCTGCTGt > 1:750704/1‑140 (MQ=255) gaTATCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGt > 1:859043/1‑140 (MQ=255) tatCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCa < 1:1373363/140‑1 (MQ=255) tatCAGCAACATCACATTTCAGTGCCCCTCCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCa < 1:418863/140‑1 (MQ=255) atCAGCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAAGGTGCTACACTCATCGTGATGCAGCCCGCTGCTGTCAg > 1:484673/1‑140 (MQ=255) gCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGTTACCCTCGTCCAGAGGCTGCCTGCTGCTGTCAGCCAt > 1:432347/1‑140 (MQ=255) gCAACATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCAt > 1:1074797/1‑140 (MQ=255) aaCATCACCTTTCAGGGCGCCTCCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCa < 1:560075/140‑1 (MQ=255) aCATCACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTG‑ACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGt > 2:833943/1‑140 (MQ=255) aTCACCTTTCAGGGTGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCTTCATCCTGATGTTGACCGCTGGTGTCAGCCATCAGTg > 1:741817/1‑140 (MQ=255) cACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTgcg > 2:853833/1‑140 (MQ=255) cACCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTgcg < 2:301345/140‑1 (MQ=255) aCCTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTG‑ACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTGCGcc < 1:833943/140‑1 (MQ=255) ccTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGcc > 1:1359994/1‑129 (MQ=255) ccTTTCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGcc < 2:1359994/129‑1 (MQ=255) tttCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTgc > 1:16243/1‑135 (MQ=255) tttCAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTgc < 2:16243/135‑1 (MQ=255) cAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTGCGCCCCACt > 1:1018303/1‑140 (MQ=255) cAGGGCGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTGCGCCCCACt < 1:278466/140‑1 (MQ=255) | TGTCGATAGTGCCGCTGGAAATAGCATCAATTGACTGAATATCCTGATCCGCGCCAGTAACGAACGTTGCCCCATCACCAACCCACAGTGACGAAGCATAAGGAAGGATATCAGCAACATCACCTTTCAGGGTGCCTTCTTCGACACGTACCGCCGACTGCGTTGTACCGCTGGCGGTCAGCTCCAGTGTACCAGCCCCCGTTTTAGTCAATGTGCTACCCTCATCCTGATGCTGCCCGCTGCTGTCAGCCATCAGTGCGCCCCACT > NC_000913/2341973‑2342239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |