Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,013,537	T→C	T235A (ACG→GCG)	yqeB ←	XdhC‑CoxI family protein YqeB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,013,537	0	T	C	100.0%	312.9 / NA	87	T235A (ACG→GCG)	yqeB	XdhC‑CoxI family protein YqeB
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/46);  total (41/46)

GCGATATCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAACCATGCAATGG  >  NC_000913/3013401‑3013671                                                                                                                                         |                                                                                                                                       gCGATATCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTc                                                                                                                                     <  1:181049/140‑1 (MQ=255)   gATATCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCg                                                                                                                                   <  1:329160/140‑1 (MQ=255)   gATATCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCg                                                                                                                                   <  2:358981/140‑1 (MQ=255)   gATATCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCg                                                                                                                                   <  2:1122787/140‑1 (MQ=255)      atCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCCCCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTc                                                                                                                                     <  1:239839/135‑1 (MQ=255)      atCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTc                                                                                                                                     >  2:239839/1‑135 (MQ=255)      atCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCg                                                                                                                                   <  1:33364/137‑1 (MQ=255)      atCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCg                                                                                                                                   >  2:33364/1‑137 (MQ=255)      atCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCAc                                                                                                                                >  1:1107501/1‑140 (MQ=255)      atCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCAc                                                                                                                                <  2:282203/140‑1 (MQ=255)      atCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCAc                                                                                                                                <  2:1097853/140‑1 (MQ=255)      atCTCCCGCACCGCGAATCACCACCAGCTGGTGTCAGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCAc                                                                                                                                >  2:1403925/1‑140 (MQ=255)        ctcCCGCACCGCGAATCACCACCAGGTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCt                                                                                                                              >  2:1050329/1‑140 (MQ=255)        ctcCCGCACCGCGAATCACCACCAGCTGGTGGCCGGAAGAATGAGAAGCTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCATCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCt                                                                                                                              <  2:604220/140‑1 (MQ=255)           ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTAtg                                                                                                                           >  1:1464173/1‑140 (MQ=255)            cGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTAtgt                                                                                                                          >  2:779355/1‑140 (MQ=255)              cACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTc                                                                                                                                     <  1:875428/127‑1 (MQ=255)              cACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTc                                                                                                                                     >  2:875428/1‑127 (MQ=255)                 cgcgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCTAGCACGCTGATGGCGAACTCCTGCGGCGCTACCGCACCTATGTTGTaa                                                                                                                     >  2:456650/1‑140 (MQ=255)                 cgcgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGAGGGCGATCACCTACGCCGCTTCAGCACCTATGTTGTaa                                                                                                                     >  1:640934/1‑140 (MQ=255)                   cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCt                                                                                                                              <  2:897284/129‑1 (MQ=255)                   cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCt                                                                                                                              >  1:897284/1‑129 (MQ=255)                   cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAAcc                                                                                                                   >  2:1327412/1‑140 (MQ=255)                    gAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCa                                                                                                                  <  2:1101483/140‑1 (MQ=255)                        caccacCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACgg                                                                                                              <  2:1404466/140‑1 (MQ=255)                        caccacCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACgg                                                                                                              <  1:1050329/140‑1 (MQ=255)                         accaccAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACggg                                                                                                             <  1:1328955/140‑1 (MQ=255)                         accaccAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACggg                                                                                                             <  2:1464173/140‑1 (MQ=255)                         accaccAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACggg                                                                                                             <  2:140507/140‑1 (MQ=255)                         accaccAGCTGGTGTCCGGAAGCATGAGAAGCTTTTATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACggg                                                                                                             <  2:621517/140‑1 (MQ=255)                         accaccAGCTGGTGTCCAGAAGGATGAGAAGATTTTATCGTCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACggg                                                                                                             <  2:723845/140‑1 (MQ=255)                           caccaGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGgcg                                                                                                           >  2:1497133/1‑140 (MQ=255)                                  tGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaa                                                                                                    >  1:34067/1‑140 (MQ=255)                                   ggTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa                                                                                                   <  1:256324/140‑1 (MQ=255)                                   ggTGTCCGGAAGGATGACAAGGTTTCATCATCAGCCCACACGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa                                                                                                   <  2:450419/140‑1 (MQ=255)                                     tgtCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACg                                                                                                 >  1:1011179/1‑140 (MQ=255)                                       tCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACggg                                                                                               <  1:1530109/140‑1 (MQ=255)                                           gAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAat                                                                                           >  2:1086650/1‑140 (MQ=255)                                            aaGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAata                                                                                          >  1:1414292/1‑140 (MQ=255)                                              ggATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACggg                                                                                               <  1:760777/133‑1 (MQ=255)                                              ggATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACggg                                                                                               >  2:760777/1‑133 (MQ=255)                                               gATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTACCGCACCTATGTTGTAACCAACGGGCGCATGTaaa                                                                                                   >  2:345910/1‑128 (MQ=255)                                               gATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTACCGCACCTATGTTGTAACCAACGGGCGCATGTaaa                                                                                                   <  1:345910/128‑1 (MQ=255)                                                aTGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGtt                                                                                      >  2:1448667/1‑140 (MQ=255)                                                 tGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTTTAATCAACGGGCTCATGTAAACGGGCAATATGttc                                                                                     >  2:693156/1‑140 (MQ=255)                                                 tGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGttc                                                                                     >  2:1202649/1‑140 (MQ=255)                                                 tGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGttc                                                                                     >  2:169870/1‑140 (MQ=255)                                                       ggTTTCATCATCAGCCCACCCGTCGCGTTCTTTTTCAGCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGc                                                                               <  1:442125/140‑1 (MQ=255)                                                       ggTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGc                                                                               <  1:779355/140‑1 (MQ=255)                                                        gTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCAATGTTGTAGCCAGCGGGCGCATGTAAACGGGCAATATGTTCTTCAGcc                                                                              >  2:397598/1‑140 (MQ=255)                                                          ttCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCAc                                                                            >  1:838424/1‑140 (MQ=255)                                                           tcatcatcaGCCCACCCGGCGCGTTATTTTTCACCTGTGATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACg                                                                           <  1:860825/140‑1 (MQ=255)                                                            catcatcaGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGc                                                                          <  1:1292057/140‑1 (MQ=255)                                                                    gCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATATAAACGGGCAATATTTTCTTCAGCCACGCCTTTCTCa                                                                  >  1:470549/1‑140 (MQ=255)                                                                     cccACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCAc                                                                 >  2:966839/1‑140 (MQ=255)                                                                     cccACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGCAAACGGGTAATGTGCTCTTCATCCACGCCTTTCTCAc                                                                 >  1:725080/1‑140 (MQ=255)                                                                          ccGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAAt                                                            <  1:1327412/140‑1 (MQ=255)                                                                              cgcgTTATTTTTCACGTGTAATCTTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGAc                                                        <  1:456650/140‑1 (MQ=255)                                                                              cgcgTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGAc                                                        <  2:1246710/140‑1 (MQ=255)                                                                              cgcgTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGAc                                                        <  2:34067/140‑1 (MQ=255)                                                                                        ttCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAg                                              >  1:243259/1‑140 (MQ=255)                                                                                        ttCACCTGTAATATTCCTGCCAGCACGCTCATGGCGAGCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAg                                              <  1:508912/140‑1 (MQ=255)                                                                                          cACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAGCCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCt                                            <  1:931909/140‑1 (MQ=255)                                                                                              tGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAAc                                        <  1:328975/140‑1 (MQ=255)                                                                                              tGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAAc                                        <  2:838424/140‑1 (MQ=255)                                                                                                  atatTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTg                                    >  2:63171/1‑140 (MQ=255)                                                                                                       tCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGcgacg                               >  2:321334/1‑140 (MQ=255)                                                                                                          gCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGTAAAGCTGAACCTTGCGACGACt                            >  1:716693/1‑140 (MQ=255)                                                                                                          gCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACt                            >  1:1095200/1‑140 (MQ=255)                                                                                                          gCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACt                            >  2:1142577/1‑140 (MQ=255)                                                                                                          gCCAGCACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACt                            >  1:1436465/1‑140 (MQ=255)                                                                                                               cACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCa                       >  2:1002867/1‑140 (MQ=255)                                                                                                               cACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCa                       >  1:880116/1‑140 (MQ=255)                                                                                                               cACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCa                       >  1:38314/1‑140 (MQ=255)                                                                                                               cACGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCa                       <  1:63171/140‑1 (MQ=255)                                                                                                                aCGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAg                      <  1:1403925/140‑1 (MQ=255)                                                                                                                aCGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAg                      <  2:896671/140‑1 (MQ=255)                                                                                                                aCGCTGATGGCGATCCCCTGCGCCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAg                      <  1:397598/140‑1 (MQ=255)                                                                                                                 cGCTGATGGCGATCTCCTGCGGCGCTTCCGCACCTCTGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGc                     <  2:640934/140‑1 (MQ=255)                                                                                                                    tGATGGCGATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAAc                  <  1:966839/140‑1 (MQ=255)                                                                                                                           gATCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAAcc           <  2:1107501/140‑1 (MQ=255)                                                                                                                            aTCTCCTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCGGCAACCCCAACCa          >  1:1225301/1‑140 (MQ=255)                                                                                                                                ccTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAACCATGCa      <  2:1011179/140‑1 (MQ=255)                                                                                                                                ccTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAACCATGCa      <  1:1497133/140‑1 (MQ=255)                                                                                                                                ccTGCGGCGCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAACCATGCa      >  2:979461/1‑140 (MQ=255)                                                                                                                                   gcggcgCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAACCATGCAATg   >  1:325411/1‑140 (MQ=255)                                                                                                                                    cggcgCTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACGTTGCGACTACTGGCGAGCAACGCCAACCATGCAATgg  >  1:448805/1‑140 (MQ=255)                                                                                                                                    cggcgCTTCCGCACCAATGTTGTAACCAAAGGGCGCAAGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAACCATGCAATgg  <  1:693156/140‑1 (MQ=255)                                                                                                                                      gcgcTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAACCATGCAAt    <  2:759697/136‑1 (MQ=255)                                                                                                                                         |                                                                                                                                       GCGATATCTCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGTTTCATCATCAGCCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTGATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGACGCAGGAAAAGCTGAACCTTGCGACGACTTGCCAGCAACCCCAACCATGCAATGG  >  NC_000913/3013401‑3013671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑