BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,192,722	T→C	L172P (CTA→CCA)	yqiJ →	putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,192,722	0	T	C	100.0%	435.4 / NA	122	L172P (CTA→CCA)	yqiJ	putative inner membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (60/62); total (60/62)

Only 100 of 130 total aligned reads displayed.

CCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACTACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAA  >  NC_000913/3192586‑3192851

ccACGCTACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTaccact                                                                                                                                <  2:1353318/140‑1 (MQ=255)

ccACGCGACCATAGTTCAGCTATTATAGATGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTaccact                                                                                                                                <  1:508747/140‑1 (MQ=255)

 cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGTGAAGGAAAACTCCCCGATCAATTTGGCCAAGTACATTATTTACCACTg                                                                                                                               >  2:422104/1‑140 (MQ=255)

 cACGCGACCATAGTTAAGCTATCACCGAACAAGAATACATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTg                                                                                                                               <  1:485174/140‑1 (MQ=255)

   cgcgACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTaccact                                                                                                                                >  1:1005572/1‑137 (MQ=255)

      gACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGcc                                                                                                                          >  1:1498293/1‑140 (MQ=255)

       aCCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCTAATACATTAGTTACCACTGGAGCCt                                                                                                                         >  1:731873/1‑140 (MQ=255)

       aCCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTAGTTACCACTGGAGCCt                                                                                                                         >  1:575032/1‑140 (MQ=255)

         cATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTga                                                                                                                       >  1:1096637/1‑140 (MQ=255)

                  gCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACAGTATCTACCACTGGAGCCTGAAGAAGGaaa                                                                                                              >  1:681692/1‑140 (MQ=255)

                   cTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGaaaa                                                                                                             >  1:1015034/1‑140 (MQ=255)

                      ttACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCGAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAAtt                                                                                                          >  1:1275495/1‑140 (MQ=255)

                      ttACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAACACATTATTTACCACGGGAGCCTGAAGAAGGAAAAAtt                                                                                                          >  1:533667/1‑140 (MQ=255)

                        aCAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAAtttt                                                                                                        >  2:1435279/1‑140 (MQ=255)

                          acaggaagaaTATATTGGTAGCATGGCGTGAATTACCAGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCa                                                                                                      <  1:751394/136‑1 (MQ=255)

                            aagaagaaTATATTGGTGGCATGGCGTTAATGACCTGTCATCAAGCCAATTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACt                                                                                                    <  2:681692/140‑1 (MQ=255)

                             agaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCATTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAAtt                                                                                                          >  1:310851/1‑133 (MQ=255)

                             agaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCATTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAAtt                                                                                                          <  2:310851/133‑1 (MQ=255)

                             agaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTa                                                                                                   <  2:15766/140‑1 (MQ=255)

                              gaagaaTATATTGGTAGTATGGCGTTAATTAACGGACATCAAGCCACTCCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTaa                                                                                                  <  2:424508/140‑1 (MQ=255)

                                agaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTaa                                                                                                  <  2:844694/138‑1 (MQ=255)

                                agaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTaa                                                                                                  >  1:844694/1‑138 (MQ=255)

                                agaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAg                                                                                                >  1:940383/1‑140 (MQ=255)

                                      tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          >  1:218620/1‑140 (MQ=255)

                                      tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          <  2:1015034/140‑1 (MQ=255)

                                      tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          <  2:1228404/140‑1 (MQ=255)

                                      tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          <  2:774721/140‑1 (MQ=255)

                                      tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          <  2:1498293/140‑1 (MQ=255)

                                      tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          >  1:1228404/1‑140 (MQ=255)

                                      tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCAACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          <  1:993526/140‑1 (MQ=255)

                                      tatTGGTAGCATGGCGTAAATTTCCGGTCATGAAGTCACCTCAGGTAAGCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          <  2:552490/140‑1 (MQ=255)

                                       atTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACaa                                                                                         <  1:934662/140‑1 (MQ=255)

                                       atTGGTAGCATGGCGATAATTATCGATCAGCAAGCCAATTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACaa                                                                                         <  1:650413/140‑1 (MQ=255)

                                        ttGGTAGCATGGCGTTATTTACCGGTCATCAAGACACTTAAGGTAATCACTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACaaa                                                                                        <  2:731873/140‑1 (MQ=255)

                                        ttGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACaaa                                                                                        <  2:1176854/140‑1 (MQ=255)

                                         tGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAg                                                                                       >  2:1054863/1‑140 (MQ=255)

                                         tGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAg                                                                                       <  2:218620/140‑1 (MQ=255)

                                         tGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAg                                                                                       >  1:1383706/1‑140 (MQ=255)

                                         tGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGCAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAg                                                                                       <  2:894741/140‑1 (MQ=255)

                                         tGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATCTACCACTGGAGCTTAAACAAGGAAAAATTTTCACTAAAGGAGAcctgt                                                                                       >  2:751394/1‑136 (MQ=255)

                                         tGGTAGCATGGCGTTAAGTACCAGTCATCAAACCACTTCTGGTAATCCGTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAg                                                                                       <  2:658004/140‑1 (MQ=255)

                                           gTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGAc                                                                                           <  1:1222904/134‑1 (MQ=255)

                                           gTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          >  2:861542/1‑135 (MQ=255)

                                           gTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          <  1:861542/135‑1 (MQ=255)

                                            tAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          >  1:1262557/1‑134 (MQ=255)

                                            tAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACa                                                                                          <  2:1262557/134‑1 (MQ=255)

                                            tAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAgtgt                                                                                    >  2:149051/1‑140 (MQ=255)

                                              gCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGAc                                                                                           >  2:294152/1‑131 (MQ=255)

                                              gCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGAc                                                                                           <  1:294152/131‑1 (MQ=255)

                                              gCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACaa                                                                                         <  1:495150/133‑1 (MQ=255)

                                              gCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACaa                                                                                         >  2:495150/1‑133 (MQ=255)

                                               cATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGACGAAGGAAAAATGTTAACTAAATGAGACAAAGTGTTaa                                                                                 >  1:552490/1‑140 (MQ=255)

                                               cATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTaa                                                                                 >  1:1005144/1‑140 (MQ=255)

                                                aTGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAat                                                                                >  1:352028/1‑140 (MQ=255)

                                                aTGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAat                                                                                >  1:121538/1‑140 (MQ=255)

                                                     gTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGTCCAAATACATTATTTACCACTGGAGGCTGAAGAATGAATAATGTTCACTAAGGGAGCCAAAGTGTTAATTAttt                                                                           >  2:451693/1‑140 (MQ=255)

                                                     gTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTAttt                                                                           >  2:1102743/1‑140 (MQ=255)

                                                       tAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGc                                                                         <  1:1174060/140‑1 (MQ=255)

                                                       tAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGc                                                                         <  2:226262/140‑1 (MQ=255)

                                                              cGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACttt                                                                  >  2:1378946/1‑140 (MQ=255)

                                                                  catcaAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGc                                                              >  2:1519533/1‑140 (MQ=255)

                                                                      aaGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAAcg                                                          <  1:1422124/140‑1 (MQ=255)

                                                                       aGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAAcgc                                                         >  2:61164/1‑140 (MQ=255)

                                                                        gCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAAcgcg                                                        <  2:212599/140‑1 (MQ=255)

                                                                             ttCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACGAAGAGTTGATTATTTGACGACCTTCTGCAACGCGATAtt                                                   >  2:646200/1‑140 (MQ=255)

                                                                             ttCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTg                                                               >  1:1518080/1‑128 (MQ=255)

                                                                             ttCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTg                                                               <  2:1518080/128‑1 (MQ=255)

                                                                             ttCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATAtt                                                   >  1:301390/1‑140 (MQ=255)

                                                                             ttCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATAtt                                                   <  2:352028/140‑1 (MQ=255)

                                                                             ttCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATAtt                                                   >  2:1008935/1‑140 (MQ=255)

                                                                                 ggTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGc                                               <  1:321663/140‑1 (MQ=255)

                                                                                 ggTAATCCCTGCGAACGAAAACCCACCGACCAATTTGACCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGc                                               <  1:451693/140‑1 (MQ=255)

                                                                                   tAATCCCTGCGAAGGAAAACTCACCGATCAAATTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCgg                                             >  2:23410/1‑140 (MQ=255)

                                                                                      tCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACGAAGTGTTAATTAATTGACGACTTTCGGCAAGGCGATATTTGGCGGaaa                                          >  2:453750/1‑140 (MQ=255)

                                                                                          tGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAaataa                                      >  1:1500665/1‑140 (MQ=255)

                                                                                            cGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATc                                    >  1:1471031/1‑140 (MQ=255)

                                                                                            cGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATc                                    >  2:1176791/1‑140 (MQ=255)

                                                                                            cGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATc                                    >  1:79446/1‑140 (MQ=255)

                                                                                            cGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATc                                    >  1:352701/1‑140 (MQ=255)

                                                                                             gAAGGAAAACTCACCCATCAATTTGTCCACATACATTCTTTACCACTGGAGCCTGAAGAAGGAAAAAGTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATcc                                   <  1:422104/140‑1 (MQ=255)

                                                                                              aaGGAAAACTCACCGATCAATTTGGCCAAATTCATAATTGACCACTGGGGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATccc                                  <  2:533667/140‑1 (MQ=255)

                                                                                              aaGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATccc                                  <  1:1435279/140‑1 (MQ=255)

                                                                                              aaGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATccc                                  <  1:125513/140‑1 (MQ=255)

                                                                                              aaGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATccc                                  <  1:1102743/140‑1 (MQ=255)

                                                                                              aaGGAAAACTCACCGATAAATTGGGCCAAATCCATCATTCACCACTGGCGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTAGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATccc                                  <  2:418729/140‑1 (MQ=255)

                                                                                                ggAAAACTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTg                                >  2:270173/1‑140 (MQ=255)

                                                                                                ggAAAACTCACCGATCAAATTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTg                                <  1:23410/140‑1 (MQ=255)

                                                                                                   aaaCTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGcc                             <  1:1054863/140‑1 (MQ=255)

                                                                                                     aCTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGcccc                           <  2:1274128/140‑1 (MQ=255)

                                                                                                     aCTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGcccc                           <  1:244737/140‑1 (MQ=255)

                                                                                                     aCTCACCGATCAATTCGGCCAATTAAATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGcccc                           <  1:453750/140‑1 (MQ=255)

                                                                                                      cTCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCa                          <  2:1471031/140‑1 (MQ=255)

                                                                                                       tCACCGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCaa                         <  2:1383706/140‑1 (MQ=255)

                                                                                                        cACCGATCAATTTGGCCTAATACATTATTTAACACGGGAACCTGAAGATGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCaaa                        <  2:575032/140‑1 (MQ=255)

                                                                                                           cGATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGACACAAAGTGTTAATTATTTGCCGACTTTCTGCAACACGATATTGGGCGGAGAATAATGCCTGGCCCCAAatat                     >  1:422845/1‑140 (MQ=255)

                                                                                                            gATCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCAAATAtt                    >  2:259555/1‑140 (MQ=255)

                                                                                                              tCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAAtt                                                                                                          <  2:318943/52‑1 (MQ=255)

                                                                                                              tCAATTTGGCCAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGt                  <  1:149051/140‑1 (MQ=255)

                                                                                                                       ccAAATACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATttatta         >  2:1064034/1‑140 (MQ=255)

                                                                                                                          aaTACATTATTTACCACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATc      >  2:383716/1‑140 (MQ=255)

CCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACTACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAA  >  NC_000913/3192586‑3192851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`