| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 55,528 | A→G | Y528H (TAC→CAC) | lptD ← | lipopolysaccharide assembly protein LptD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 55,528 | 0 | A | G | 99.0% | 346.2 / NA | 99 | Y528H (TAC→CAC) | lptD | lipopolysaccharide assembly protein LptD |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (54/44); total (55/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCG > NC_000913/55392‑55662 | tCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGtt > 1:1487658/1‑140 (MQ=255) catcatcatATATGCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCg > 1:885939/1‑140 (MQ=255) catcataatATATGCGACATGTGACACCGGTCGTCGCCTGGTTAGCGGGGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCg < 2:599742/140‑1 (MQ=255) atatatGCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGAt < 1:1458315/140‑1 (MQ=255) atGCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATcgcg > 1:1367135/1‑140 (MQ=255) tGCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGACGTAGTTATAGATGTCGCTCTGATCGCGa > 1:741559/1‑140 (MQ=255) gCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGCGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGAt > 1:578369/1‑140 (MQ=255) gCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGAt > 1:41541/1‑140 (MQ=255) gCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGAt > 1:258244/1‑140 (MQ=255) cGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCg < 1:1467042/126‑1 (MQ=255) cGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCg > 2:1467042/1‑126 (MQ=255) cGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGAAGAGGCGTGGTTAGAGATGTCGCTCTGATCGCGATa > 2:561791/1‑140 (MQ=255) agaTGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACg > 1:287923/1‑140 (MQ=255) agaTGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCATGGTTATATATGTTGCTCTGATCGCGATACg > 2:546935/1‑140 (MQ=255) agaTGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGACGTGGTTATAGATGTCGCTCTGATCGCGATACg > 1:928945/1‑140 (MQ=255) gaTGTGACACCGGTCGTTCCCTGGTTAGCGGTGGCCATACGGTCAAGATCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACgg < 2:584604/140‑1 (MQ=255) gaTGTGACACCGGTCCTCACCTCGTTAGCCGAGGCAAGACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACgg < 1:438249/140‑1 (MQ=255) gaTGTAACGCCGTTCGCCACCGGGTTAGGGGAGGAAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACgg < 2:923689/140‑1 (MQ=255) aTGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGc > 1:1032033/1‑140 (MQ=255) tgtgACGCCGGTCGTCACCTGGTTGGGGGAGGGAATTGGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 2:1099482/140‑1 (MQ=255) tgtgACACCGGTCGTCCCCTGGTTACCGGTGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 1:393037/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGGGGCAATATGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 1:561791/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa > 1:921849/1‑140 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 1:1048885/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 2:1032033/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 1:1124301/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 1:1181896/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 1:259994/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 2:885939/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 2:1367135/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 1:195476/140‑1 (MQ=255) tgtgACACCGGTCGTCACCTGGTTAGCGGAGGCAACACGTTCAAGACCTCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 2:639104/140‑1 (MQ=255) tgtaACACCGGCGGCCACCGGGTGGGGGGAGGAACGACGGTCAAGCCCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 2:928945/140‑1 (MQ=255) ggtgACCCCGGTCGTCCCCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCa < 2:41541/139‑1 (MQ=255) ccGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACaa > 1:1042579/1‑140 (MQ=255) cGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGATGAGTCGTGGTTATAGAAGTCGCTCTGATCGGGATACGGCACGTACaaa > 2:455930/1‑140 (MQ=255) gtcgtcATCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATa > 1:375732/1‑140 (MQ=255) gtcgtcACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATa > 2:826068/1‑140 (MQ=255) gtcgtcACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATa > 2:1314964/1‑140 (MQ=255) gtcgtcACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCAGAGCGCGATGCGGCACGTACAAATa > 1:725535/1‑140 (MQ=255) gtcgtcACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCACTCAGATCGCGATGCGGCACGTACAAATa > 1:732236/1‑140 (MQ=255) cgtcACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTATGATCGCGATACGGCACGTACAAATAcc > 2:196982/1‑139 (MQ=255) tGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTgcgcgcg < 1:1095526/140‑1 (MQ=255) tGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTgcgcgcg < 2:1310373/140‑1 (MQ=255) ggTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTgcgcgcgc > 2:383247/1‑140 (MQ=255) gTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTGTGATCGCTATACGGTACGTACTAATACTGcgcgcgcg > 1:718780/1‑140 (MQ=255) gTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGcgcgcgcg > 2:1173339/1‑140 (MQ=255) gAGGCAATACGGTCATGACCGCAGTAAGTGCGGTCCCCGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAg < 1:548320/140‑1 (MQ=255) gAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTgcg < 1:1127905/127‑1 (MQ=255) gAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTgcg > 2:1127905/1‑127 (MQ=255) gAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAg < 2:375732/140‑1 (MQ=255) gAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAg > 2:1068124/1‑140 (MQ=255) gCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGt > 1:319934/1‑140 (MQ=255) aaTAGGGTAAAGACCGAGGTAAGTCCGGTCCCGGAACAGGCCAGAGTAATCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGttt < 2:732236/140‑1 (MQ=255) aaTACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGttt < 1:826068/140‑1 (MQ=255) gTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGGGATACGGCTCGTGCAAATACTGCGCGCGCGGTTCCAGCGTTTGGGtat > 2:548320/1‑140 (MQ=255) gTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGtat > 1:1289309/1‑140 (MQ=255) gccgTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAg < 2:319934/140‑1 (MQ=255) gccgTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAg < 1:1173339/140‑1 (MQ=255) ccgTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACAGCGCGCGGGGTGCCGGCGTTTAGGTATAACCCGGAGc > 1:420655/1‑140 (MQ=255) cgTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGcc < 2:921849/140‑1 (MQ=255) cgTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGcc < 1:1314964/140‑1 (MQ=255) tAAGTCCGGTCCCGGAACAGGCTAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAg < 1:546935/140‑1 (MQ=255) tAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAg < 1:1068124/140‑1 (MQ=255) tAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAg < 2:880000/140‑1 (MQ=255) tAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAg < 2:1487658/140‑1 (MQ=255) gTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGATTGCGTCTAACCCAGAGCCAGCATTTCCa > 1:710078/1‑140 (MQ=255) gTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGGTCCAGCGATTGGGTATAACCCAGAGCCAGCATTTCCa > 1:485455/1‑140 (MQ=255) gTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACGGCGCGCGCTGTTGCAGAGTTTGGGTATAACCCGGAGCCAGCATTTCCa > 2:570083/1‑140 (MQ=255) ggAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATcg > 2:323776/1‑140 (MQ=255) gAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATcgc < 2:99690/140‑1 (MQ=255) ggCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCa > 2:944495/1‑140 (MQ=255) ggCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCa > 1:1313841/1‑140 (MQ=255) ggCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCa > 2:1177201/1‑140 (MQ=255) ggCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCa > 1:813253/1‑140 (MQ=255) ggCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGATCCAGCGTATGGATATAACCCGGAGACAGCTTTTCCATATCGCGTTCa > 2:482581/1‑140 (MQ=255) gCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCaa > 1:313533/1‑140 (MQ=255) ccAGAGTAGTCGGATAGCAGCATAGCCGACTCGTGGTCATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCaaa < 1:406434/140‑1 (MQ=255) ccAGAGTAGTCAGATTGTAGCACAGACGAGTTGTGCTTACAGATGTCGTTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCaaa < 2:485455/140‑1 (MQ=255) agtagtCAGATTGCAGCAGAGACGAGTCGTGGTTATATATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGAcc > 2:64128/1‑140 (MQ=255) gtcggATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAAACCGAAGCGAGCATTTCGATATAGCGTTCAAAGACCAttt > 2:406434/5‑140 (MQ=255) tCAGATTGCAGCAGCGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCAtttt > 2:885376/1‑140 (MQ=255) tCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATcgcg > 1:1365658/1‑125 (MQ=255) tCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATcgcg < 2:1365658/125‑1 (MQ=255) tCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCAtttt > 2:185871/1‑140 (MQ=255) tCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCAtttt > 1:964911/1‑140 (MQ=255) tCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCAtttt > 2:1472005/1‑140 (MQ=255) tCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTAGGTATAACGCGGAGCCAGCATTTCCATATCACGTTCAAAGACCAtttt > 2:498198/1‑140 (MQ=255) tCAGATTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCCCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCAtttt > 2:936578/1‑140 (MQ=255) aTTGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCg > 2:989752/1‑140 (MQ=255) ttGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGt > 1:942835/1‑140 (MQ=255) ttGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGt < 1:989752/140‑1 (MQ=255) ttGCAGCAGAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGt > 1:1190364/1‑140 (MQ=255) ttGCAGCACAGACGAGGCGTGGCTATAGATTTCGCCCTGTTCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGt < 2:710078/140‑1 (MQ=255) agcagAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAAc > 2:2459/1‑140 (MQ=255) gcagAGACGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACt < 1:383247/140‑1 (MQ=255) gagaCGAGTCGTGGTTATAGATGTCGCTATGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTg < 1:196982/140‑1 (MQ=255) agaCGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGa > 2:1085240/1‑140 (MQ=255) agaCGAGTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGa > 2:1480236/1‑140 (MQ=255) gTCGTGGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCg < 1:2459/140‑1 (MQ=255) | TCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCTGGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCG > NC_000913/55392‑55662 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |