| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 477,402 | C→T | A406T (GCC→ACC) | pdeB ← | c‑di‑GMP phosphodiesterase PdeB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 477,402 | 0 | C | T | 99.1% | 343.4 / NA | 111 | A406T (GCC→ACC) | pdeB | c‑di‑GMP phosphodiesterase PdeB |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (54/55); total (55/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGATT > NC_000913/477265‑477537 | cgcATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATTCCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGgtgc < 1:1084593/140‑1 (MQ=255)cgcATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAGGATAAATTCCATGGCCTGCCTCCCGATAGCGAGAAATTATCGGGgtgc > 2:477478/1‑140 (MQ=255)cgcATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGgtgc > 2:1084593/1‑140 (MQ=255) gcATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCt > 2:1212689/1‑140 (MQ=255) cAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGtt > 2:118845/1‑140 (MQ=255) cAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGtt > 1:390066/1‑140 (MQ=255) aTCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCaa > 1:174790/1‑140 (MQ=255) aTCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCaa > 1:1468017/1‑140 (MQ=255) tCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTcg > 2:1057080/1‑140 (MQ=255) tCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTcg > 1:931978/1‑140 (MQ=255) ttCAGAATGTCGACATCTAGATTCTGTAAATCACTCAAAATTGAATACACCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTcgcg < 2:445596/140‑1 (MQ=255) ttCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTcgcg < 1:83001/140‑1 (MQ=255) ttCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTcg > 1:358514/1‑138 (MQ=255) ttCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTcg < 2:358514/138‑1 (MQ=255) tGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTg > 2:26949/1‑140 (MQ=255) gTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACt > 2:157053/1‑128 (MQ=255) gTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACt < 1:157053/128‑1 (MQ=255) gTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGa > 2:1156203/1‑140 (MQ=255) gTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGa > 1:158601/1‑140 (MQ=255) cGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACt < 1:1341906/126‑1 (MQ=255) cGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGt > 2:56731/1‑140 (MQ=255) gACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGtt > 2:54776/1‑140 (MQ=255) gACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGtt > 2:21745/1‑140 (MQ=255) aCATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGtt < 2:246970/130‑1 (MQ=255) aCATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGtt > 1:246970/1‑130 (MQ=255) gATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGcgcg > 2:1156013/1‑140 (MQ=255) aTCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGa < 1:193027/140‑1 (MQ=255) tCCTGTAAATAACTTTAACTTGCATCCCCCGTACCAATATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGACAAACTCGCGTTCAGTGAGTTCAAGCGCGAt < 1:479642/140‑1 (MQ=255) tCCTGTAAATAACTTAAGCTTGTATACCCCGCACCGAAACCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAt < 2:477653/140‑1 (MQ=255) tCCTGTAAATAACTTAACCTTGAATACCCCGTACCAAAACCATCAAGACAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAt < 2:643180/140‑1 (MQ=255) tCCTGTAAATAACTTAAACTTGCATCCCCTGTACCAACATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAt < 1:484025/140‑1 (MQ=255) tCCTGTAAATAACTTAAACTTGCATACCCCGTACCAATATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAt < 1:558103/140‑1 (MQ=255) tCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAt < 1:1542194/140‑1 (MQ=255) tCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGACAAACTCGCGTTCAGTGAGTTCAAGCGCGAt < 1:1212689/140‑1 (MQ=255) tGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAt < 2:1309849/137‑1 (MQ=255) gTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgt > 2:330198/1‑140 (MQ=255) gTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgt > 2:1187358/1‑140 (MQ=255) tAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtc < 1:330198/140‑1 (MQ=255) tAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtc > 2:776838/1‑140 (MQ=255) tAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtc > 2:965699/1‑140 (MQ=255) tAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtc > 1:1281198/1‑140 (MQ=255) tAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtc < 2:1270072/140‑1 (MQ=255) tAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTAGCGGTCCGTGAGTCCAAGCGCGAtctgtc > 1:517411/1‑140 (MQ=255) aCTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 2:390066/140‑1 (MQ=255) aCTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 1:776838/140‑1 (MQ=255) aCTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 2:1347651/140‑1 (MQ=255) aCTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 2:931978/140‑1 (MQ=255) aCTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 2:174790/140‑1 (MQ=255) aCTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 2:1281198/140‑1 (MQ=255) aCTTAAACTTGAATACCCAGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 1:1255873/140‑1 (MQ=255) aCTTAAACTTGAATAACCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 1:606117/140‑1 (MQ=255) tAAACTTGAATACCCCGCACCAAAATCATCAGGATTAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTaa < 2:517411/140‑1 (MQ=255) aaaCTTGAGTACCCCGTGCCAACATCATCAATATATATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAAc < 2:745565/140‑1 (MQ=255) aaaCTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTGGCGATCAATGAGTTCAAGCGCCATCTGTCTGGGATTAAc > 2:606117/1‑140 (MQ=255) aaaCTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGTGTTCAGTGAGTGCAGGCGCGATCTGTCTGGGATTAAc > 1:745565/1‑140 (MQ=255) aaCTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAAcc < 1:965699/140‑1 (MQ=255) aCTTGAATACCCCGTCCCAAAACCATCAATATAAATTGCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCt < 1:492789/140‑1 (MQ=255) ttGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGa < 1:1156013/140‑1 (MQ=255) ttGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGa < 1:1187358/140‑1 (MQ=255) ttGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGa < 1:1363717/140‑1 (MQ=255) ttGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGa < 2:800706/140‑1 (MQ=255) aaTACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCGGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAg > 2:972261/1‑140 (MQ=255) aaTACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtctg < 2:1481681/125‑1 (MQ=255) aaTACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtctg > 1:1481681/1‑125 (MQ=255) aaTACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAg > 1:100119/1‑140 (MQ=255) ccccGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGtgat < 1:1057080/140‑1 (MQ=255) cccGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt < 2:1300142/124‑1 (MQ=255) cccGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt > 1:1300142/1‑124 (MQ=255) ccGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAAc < 1:9617/127‑1 (MQ=255) ccGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAAc > 2:9617/1‑127 (MQ=255) cGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACTTGATAGtgattga > 2:1198103/1‑140 (MQ=255) cGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGtga < 2:1282921/136‑1 (MQ=255) cGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGtga > 1:1282921/1‑136 (MQ=255) tACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATc > 2:142613/1‑140 (MQ=255) aCCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGTATCGGCAAACTCGCGTTCAGTGAGTTCAAGGGCGATCTGTCTAGGTTTAACCTGATAGTGATTGATCa > 1:632895/1‑140 (MQ=255) aCCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAAc > 1:1032684/1‑123 (MQ=255) aCCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAAc < 2:1032684/123‑1 (MQ=255) catcaAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACgc < 1:1156203/140‑1 (MQ=255) atcaAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAGGCGCGATCGGTCAGGGCTTAACCTGATAGTTATTGATCATGTCACgca > 2:496141/1‑140 (MQ=255) atcaAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACgca > 2:956810/1‑140 (MQ=255) aGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCaa < 1:972261/140‑1 (MQ=255) tCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGAt < 2:100119/140‑1 (MQ=255) aTGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGAt < 2:190126/138‑1 (MQ=255) aTGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGAt > 1:190126/1‑138 (MQ=255) tGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCCGCAATTGCGGGAtttt > 2:682591/1‑140 (MQ=255) tGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGAtttt > 1:1401684/1‑140 (MQ=255) cccGCCTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGGTTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTc > 1:121475/1‑140 (MQ=255) ccTCCCGGTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAg > 1:5005/1‑140 (MQ=255) gcaccccGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAg > 1:1198572/7‑140 (MQ=255) ggTAGCGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAGCCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGc < 1:1456385/140‑1 (MQ=255) aGCGAGAAATTATCGGGTTGCTTGTTTTCGGTTCGTCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTATGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACg < 2:487631/140‑1 (MQ=255) gacagaaTGATCGGGGCCCTGGCTTTCGGATCGACAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACggg < 2:694166/135‑1 (MQ=255) cGAGAAATTATCGGGTTGCTGGTTTGCGGATCGGCAAGCTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACggg < 1:496141/140‑1 (MQ=255) cGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACggg > 2:346890/1‑140 (MQ=255) cGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACggg > 1:1018746/1‑140 (MQ=255) cGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACggg < 1:287990/140‑1 (MQ=255) cGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACggg < 1:346890/140‑1 (MQ=255) cGAGAAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACggg < 2:158601/140‑1 (MQ=255) gagaAATTATCGGGGTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGGACGTGCGGGAGTTTTTGCGAGGTGTGCACgggg > 2:722289/1‑140 (MQ=255) ggggTGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGAtt < 1:142613/140‑1 (MQ=255) | CGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGATT > NC_000913/477265‑477537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |