Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,744,442 G→A E39K (GAA→AAA)  yiaM → 2,3‑diketo‑L‑gulonate:Na(+) symporter ‑ membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,744,4420GA99.1% 395.5 / NA 113E39K (GAA→AAA) yiaM2,3‑diketo‑L‑gulonate:Na(+) symporter ‑ membrane subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (61/51);  minor base T (0/1);  total (61/52)
Fisher's exact test for biased strand distribution p-value = 4.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

GACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATGAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGCTCTGGTT  >  NC_000913/3744306‑3744576
                                                                                                                                        |                                                                                                                                      
gacaTAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAAt                                                                                                                                     >  2:1162109/1‑140 (MQ=255)
 acaTAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAAtt                                                                                                                                    >  1:1110912/1‑140 (MQ=255)
   aTAGCCTCAAGGAATAGCTATGAAAAAAATACTCAAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGt                                                                                                                                  <  2:1251110/140‑1 (MQ=255)
    tAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTc                                                                                                                                 <  2:356557/140‑1 (MQ=255)
     aGCCTCAAGGAATAGCTTTGAAAAAAATACTGGAATCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCa                                                                                                                                <  2:681582/140‑1 (MQ=255)
     aGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCa                                                                                                                                <  2:1486837/140‑1 (MQ=255)
     aGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCa                                                                                                                                <  2:813756/140‑1 (MQ=255)
     aGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCa                                                                                                                                <  1:967049/140‑1 (MQ=255)
     aGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCa                                                                                                                                <  1:929123/140‑1 (MQ=255)
     aGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCa                                                                                                                                <  2:199459/140‑1 (MQ=255)
       ccTCAAGGAATAGCTATGAAAAAAATACTCGGAGCGATAATGGCGATTCATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACg                                                                                                                              <  2:678080/140‑1 (MQ=255)
       ccTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACg                                                                                                                              <  1:1239308/140‑1 (MQ=255)
       ccTCAAGGAATAGCTATGAAAAAAACACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACg                                                                                                                              <  1:651824/140‑1 (MQ=255)
           aaGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGttat                                                                                                                          >  1:1537369/1‑140 (MQ=255)
           aaGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGttat                                                                                                                          >  1:1210055/1‑140 (MQ=255)
            aGGAATAGCTTTGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGttatt                                                                                                                         >  2:1065146/1‑140 (MQ=255)
               aaTAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGttatttat                                                                                                                      <  2:1172469/140‑1 (MQ=255)
                aTAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTtatttatt                                                                                                                     <  2:1152774/140‑1 (MQ=255)
                 tAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACTAGCATTTTATCTGTTGATAAATTGTCACGTtatttatt                                                                                                                     <  2:785638/139‑1 (MQ=255)
                 tAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTtatttatt                                                                                                                     >  1:785638/1‑139 (MQ=255)
                 tAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTatttattt                                                                                                                    >  1:1051330/1‑140 (MQ=255)
                  aGCTATGAAAAAAATACTCGAACCAATACTGTCGATTAAGCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTg                                                                                                                   <  2:645386/140‑1 (MQ=255)
                        gAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGt                                                                                                             <  2:178399/140‑1 (MQ=255)
                         aaaaaaaTACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGtt                                                                                                            >  1:1078967/1‑140 (MQ=255)
                          aaaaaaTACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTa                                                                                                           <  2:1078967/140‑1 (MQ=255)
                           aaaaaTACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTaa                                                                                                          >  1:1023335/1‑140 (MQ=255)
                              aaTACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTCGATAAATGGTCACGGTATTTAATTGTCTGGTTAACGt                                                                                                       >  1:421894/1‑140 (MQ=255)
                                       aGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGgcg                                                                                              <  1:1162109/140‑1 (MQ=255)
                                       aGCAATACTGGCAATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGgcg                                                                                              <  2:1434776/140‑1 (MQ=255)
                                        gCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGgcgc                                                                                             >  2:765007/1‑140 (MQ=255)
                                            tACTGGCGATTAATCTCGCCGTACTATCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGAtt                                                                                         >  2:1053431/1‑140 (MQ=255)
                                                    aTTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTATCGTTTATTGCCGCGATTGTAGCttt                                                                                 >  1:700798/1‑140 (MQ=255)
                                                    aTTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCttt                                                                                 <  2:144820/140‑1 (MQ=255)
                                                      tAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTg                                                                                        <  1:1522857/131‑1 (MQ=255)
                                                      tAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTa                                                                               <  2:1051330/140‑1 (MQ=255)
                                                      tAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTa                                                                               >  1:1275208/1‑140 (MQ=255)
                                                      tAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTa                                                                               <  1:765007/140‑1 (MQ=255)
                                                      tAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACATTTATTGGCGCGATTGTAGCTTTTa                                                                               >  1:623727/1‑140 (MQ=255)
                                                        aTCTCGCCGTACTTTCCTGTATAGTATTTATAAACTTTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATg                                                                             <  2:528824/140‑1 (MQ=255)
                                                          ctcGCCGTACTTTCCTGTATTGTATTTATTAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGa                                                                           <  1:525857/140‑1 (MQ=255)
                                                           tcGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGAt                                                                          >  1:942630/1‑140 (MQ=255)
                                                                     ttCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGcc                                                                    >  1:1532712/1‑136 (MQ=255)
                                                                     ttCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGcc                                                                    <  2:1532712/136‑1 (MQ=255)
                                                                        cTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATaa                                                                        <  2:243323/129‑1 (MQ=255)
                                                                        cTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATaa                                                                        >  1:243323/1‑129 (MQ=255)
                                                                           tattgtattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTACGGTTTATTCGCGAGATCGTAGCTTTAATGGCTAACGCCCACGTTCAgg                                                          >  2:560900/1‑140 (MQ=255)
                                                                            attgtattTATAAACGTTATTTCAACATAGGGTTTTCGGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGt                                                         <  1:716586/140‑1 (MQ=255)
                                                                            attgtattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGt                                                         >  2:135254/1‑140 (MQ=255)
                                                                            attgtattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGt                                                         <  2:1509205/140‑1 (MQ=255)
                                                                            attgtattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGt                                                         <  2:790/140‑1 (MQ=255)
                                                                            attgtattTATAAACAATATTTGAAGATATGGTGTACAGGCAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGt                                                         <  2:700798/140‑1 (MQ=255)
                                                                             ttgtattTATAAACATTCTTTTCAGATATGGCTTTAAGATAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTc                                                        <  2:421894/140‑1 (MQ=255)
                                                                              tgtattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCa                                                       >  1:1329168/1‑140 (MQ=255)
                                                                                tattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACg                                                                >  1:1029844/1‑129 (MQ=255)
                                                                                tattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACg                                                                <  2:1029844/129‑1 (MQ=255)
                                                                                tattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGAATGTAGCTGTTAGGGGTAACGCGCACGTTCAGGTCAcc                                                     >  1:492157/1‑140 (MQ=255)
                                                                                tattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTCATTGGCGCTATTGTAGATTTTATGGATAACTGCCACGTTCAGGTCAcc                                                     >  2:661205/1‑140 (MQ=255)
                                                                                tattTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTCATTGGCGCGATTGTGGCTTTTATGGTTAACGACCACGTTCAGGTCAcc                                                     >  2:715037/1‑140 (MQ=255)
                                                                                 attTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCt                                                    <  1:1065146/140‑1 (MQ=255)
                                                                                     ataAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTATCTTTTATGGATCACGCCCACGATCAGGTCACCTTTCt                                                >  1:399508/1‑140 (MQ=255)
                                                                                     ataAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATGACGCCCACGGTCAGGTCACCTTTCt                                                >  1:460882/1‑140 (MQ=255)
                                                                                     ataAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCt                                                >  1:1469526/1‑140 (MQ=255)
                                                                                     ataAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCt                                                >  2:137570/1‑140 (MQ=255)
                                                                                       aaaCATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCtgg                                              <  2:1329168/140‑1 (MQ=255)
                                                                                       aaaCATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCtgg                                              <  1:137519/140‑1 (MQ=255)
                                                                                       aaaCATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCtgg                                              >  1:203852/1‑140 (MQ=255)
                                                                                          cATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTTGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCtggtgg                                           >  1:1199327/1‑140 (MQ=255)
                                                                                          cATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCtggtgg                                           >  1:254498/1‑140 (MQ=255)
                                                                                          cATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCtggtgg                                           >  1:107473/1‑140 (MQ=255)
                                                                                          cATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTCATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCtggtgg                                           >  2:340963/1‑140 (MQ=255)
                                                                                            ttattTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGgag                                         <  2:1297859/140‑1 (MQ=255)
                                                                                            ttattTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGgag                                         <  2:1008697/140‑1 (MQ=255)
                                                                                               ttttAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTCGCTTTTATTGATAACGCCCACGTTCTGGTCACCTTTCTGGTGGAGaaa                                      >  2:613380/1‑140 (MQ=255)
                                                                                                    aGATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACtctc                                 <  1:135254/140‑1 (MQ=255)
                                                                                                     gATATGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTcc                                >  1:1362611/1‑140 (MQ=255)
                                                                                                         tGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCAGGTTCAGGTCACATTGCTGGTGGAGAAACTCTccccgc                            >  1:744250/1‑138 (MQ=255)
                                                                                                         tGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCg                            >  2:846124/1‑140 (MQ=255)
                                                                                                         tGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCg                            >  2:1057356/1‑140 (MQ=255)
                                                                                                         tGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGGCACCTTACTGGTGAAGAAACTCTCCCCCg                            >  1:624080/1‑140 (MQ=255)
                                                                                                         tGGTTTTCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGACACGTTTCTGGTGCAGAAACTCTCCCCCg                            >  1:658596/1‑140 (MQ=255)
                                                                                                              ttCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCGGGTCACCGTTCTGGGGGAGAAGCTCTCCCCCGCATgg                       >  1:416563/1‑140 (MQ=255)
                                                                                                               tCAGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGc                      >  1:31973/1‑140 (MQ=255)
                                                                                                                 aGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAg                    >  1:1227776/1‑140 (MQ=255)
                                                                                                                 aGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAg                    >  2:1366063/1‑140 (MQ=255)
                                                                                                                 aGACAAGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGACACCTTTGTGGTGGAGAAACTATCCCCCGCATGGCAg                    >  1:624144/1‑140 (MQ=255)
                                                                                                                  gACAGGCTTTTTATCTACTGATCAATGGTCTTGTTTTTTTTTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCCCCTTTCTGGTGGAGAAACTCTCCCCGCATGGCAGcg                  <  2:744250/140‑1 (MQ=255)
                                                                                                                      aGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGcgacg               >  1:1104005/1‑140 (MQ=255)
                                                                                                                      aGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGcgacg               >  1:1368481/1‑140 (MQ=255)
                                                                                                                      aGCATTTTATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGcgacg               >  2:1024175/1‑140 (MQ=255)
                                                                                                                          ttttATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTc           <  2:1537369/140‑1 (MQ=255)
                                                                                                                            ttATCTGTTGATAAATTGTCACTTTATTTATCTGTCTGGATAACGTTTCTTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGc         <  2:416563/140‑1 (MQ=255)
                                                                                                                            ttATCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGc         <  2:1104005/140‑1 (MQ=255)
                                                                                                                             tATCTGTTGATAAATCGTCACGTTAATTACTTGTCTGATTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGct        <  1:397824/140‑1 (MQ=255)
                                                                                                                              aTCTGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGctc       <  2:203852/140‑1 (MQ=255)
                                                                                                                                 tGTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGAAGAAACTCTCCCCCGCTTGGCGGCGACGAGTCGCTCTgg    >  2:682008/1‑140 (MQ=255)
                                                                                                                                  gTTGATAATTTGTCACGTTATTTATTTGTCGTGGTGACGTTTATTGGCACGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGCTCTGGt   <  2:751606/140‑1 (MQ=255)
                                                                                                                                  gTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGc         >  1:1456367/1‑134 (MQ=255)
                                                                                                                                  gTTGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGc         <  2:1456367/134‑1 (MQ=255)
                                                                                                                                   ttGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGCTCTGGtt  >  1:127595/1‑140 (MQ=255)
                                                                                                                                   ttGATAAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGACAAAGTCTGCCCCGCATGGCAGGGACGAGTCGCTCTGGtt  >  2:518189/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                      
GACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATGAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGCTCTGGTT  >  NC_000913/3744306‑3744576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: