Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,877,479	A→G	intergenic (‑14/+226)	yidB ← / ← gyrB	conserved protein YidB/DNA gyrase subunit B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,877,479	0	A	G	100.0%	227.6 / NA	64	intergenic (‑14/+226)	yidB/gyrB	conserved protein YidB/DNA gyrase subunit B
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (30/34);  total (30/34)

CACTTTGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGG  >  NC_000913/3877342‑3877614                                                                                                                                          |                                                                                                                                        cACTTTGCAGTTTTTTCAGCAGTACCTGACTGCCGCCGTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTgaa                                                                                                                                       <  1:678620/140‑1 (MQ=255)      tGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGtt                                                                                                                                  <  2:1208402/140‑1 (MQ=255)      tGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGtt                                                                                                                                  <  2:196161/140‑1 (MQ=255)       gCAGTTTTTCCAGCATCACCTGAATACCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTa                                                                                                                                 <  1:523936/140‑1 (MQ=255)       gCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTa                                                                                                                                 <  1:956557/140‑1 (MQ=255)                ccAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGAc                                                                                                                        <  2:329931/140‑1 (MQ=255)                  agcagcACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCGCCATGATGATCGCCGGTGAAGGGTTACgtgtctgtct                                                                                                                      >  1:405456/1‑134 (MQ=255)                   gcagcaCCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCa                                                                                                                     <  2:129468/140‑1 (MQ=255)                    cagcaCCTGAATGCCCCCCTGCTCCACAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGGCCCaa                                                                                                                    <  1:529944/140‑1 (MQ=255)                     agcaCCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTTAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCCCCTGTGAAGCGTTACGTGTTGACCCaaa                                                                                                                   <  2:387832/140‑1 (MQ=255)                       caCCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCaaaaa                                                                                                                 >  1:1114568/1‑140 (MQ=255)                       caCCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCa                                                                                                                     <  2:375861/136‑1 (MQ=255)                       caCCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCa                                                                                                                     >  1:375861/1‑136 (MQ=255)                                 ccgccCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCGTCAAAAAGCCCCATGATAATCACCTGTGAAGCTTTACGTCTTGACCCAAAAAGTATAGAttt                                                                                                       >  1:511391/1‑140 (MQ=255)                                  cgccCTGCTCCTCAAGCCAACTCAACATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTg                                                                                                      <  1:708521/140‑1 (MQ=255)                                  cgccCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTg                                                                                                      >  1:389586/1‑140 (MQ=255)                                  cgccCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTg                                                                                                      <  2:389586/140‑1 (MQ=255)                                  cgccCTGCTCCTCAACCCAACTTAAAATAACCTGATAGTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTg                                                                                                      <  1:528267/140‑1 (MQ=255)                                   gccCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGc                                                                                                     <  1:1219518/140‑1 (MQ=255)                                   gccCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGc                                                                                                     <  1:1198511/140‑1 (MQ=255)                                   gccCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGGGAAGCGTGACGGGTGGACCCACAAAGTATAGATTTGc                                                                                                     >  1:514106/1‑140 (MQ=255)                                     ccTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCgg                                                                                                   <  1:1067284/140‑1 (MQ=255)                                      cTGCTCCTCAACCCAACTTAAACTAGCCTGATATTTCCCGGCATCGCCCTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCggg                                                                                                  <  2:652273/140‑1 (MQ=255)                                       tGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGc                                                                                                     >  2:1362335/1‑136 (MQ=255)                                       tGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGc                                                                                                     <  1:1362335/136‑1 (MQ=255)                                        gCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGgat                                                                                                <  2:1033595/140‑1 (MQ=255)                                         ctcctcAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCAGgatg                                                                                               >  1:326628/1‑140 (MQ=255)                                         ctcctcAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTAAGGGTTGACCCTAAAAGTATAGATTTGCGGgatg                                                                                               >  2:708521/1‑140 (MQ=255)                                          tcctcAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCAGgatga                                                                                              <  2:326628/140‑1 (MQ=255)                                                      cTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGAtt                                                                                  >  2:225273/1‑140 (MQ=255)                                                       ttAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTg                                                                                 <  2:958735/140‑1 (MQ=255)                                                       ttAAAATAGCCTGATATGTCCCTGCATCGCCATTCCGAAGGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTg                                                                                 <  2:514106/140‑1 (MQ=255)                                                         aaaaTAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCa                                                                               <  2:1114568/140‑1 (MQ=255)                                                           aaTAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGgatga                                                                                              >  2:1022634/1‑123 (MQ=255)                                                           aaTAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGgatga                                                                                              <  1:1022634/123‑1 (MQ=255)                                                                ccTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGGGGGATGATAATTGCGGATTGCAGAAATaa                                                                        >  1:1354271/1‑140 (MQ=255)                                                                ccTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaa                                                                        >  2:987583/1‑140 (MQ=255)                                                                ccTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaa                                                                        >  1:223851/1‑140 (MQ=255)                                                                ccTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaa                                                                        >  1:1300968/1‑140 (MQ=255)                                                                ccTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTAGAGATTTGAGGGTTGGTAATTGTGGATTGCAGAAATaa                                                                        >  1:409375/1‑140 (MQ=255)                                                                ccTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAG‑‑TAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaaaa                                                                      >  1:1045353/1‑140 (MQ=255)                                                                   gATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaaaaa                                                                     >  1:1522403/1‑140 (MQ=255)                                                                    atatTTCCCCGCATTGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGTATGATAATTGCGGATTGCAGAAATAAAAAg                                                                    >  1:185243/1‑140 (MQ=255)                                                                    atatTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg                                                                    >  1:1034673/1‑140 (MQ=255)                                                                    atatTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg                                                                    >  2:11698/1‑140 (MQ=255)                                                                     tatTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTG‑TGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAggg                                                                  >  2:1317911/1‑140 (MQ=255)                                                                      atTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAggg                                                                  <  1:11698/140‑1 (MQ=255)                                                                      atTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAggg                                                                  <  2:1354271/140‑1 (MQ=255)                                                                        ttCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCg                                                                <  1:832051/140‑1 (MQ=255)                                                                          ccccGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAggg                                                                  >  1:644659/1‑136 (MQ=255)                                                                          ccccGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAggg                                                                  <  2:644659/136‑1 (MQ=255)                                                                             cGCATCGCCTTTCAGAACGGCAACGACAACTCCATGAAATAGCCCCATAATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgat                                                           <  2:409375/140‑1 (MQ=255)                                                                               cATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatga                                                         >  2:1399663/1‑140 (MQ=255)                                                                               cATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatga                                                         >  1:155349/1‑140 (MQ=255)                                                                                aTCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatgat                                                        >  1:302646/1‑140 (MQ=255)                                                                                     cTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCg                                                   <  2:1522403/140‑1 (MQ=255)                                                                                        tCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGccc                                                <  1:142882/140‑1 (MQ=255)                                                                                        tCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGccc                                                >  1:922642/1‑140 (MQ=255)                                                                                         cAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCt                                               <  2:1084535/140‑1 (MQ=255)                                                                                         cAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCt                                               <  1:225273/140‑1 (MQ=255)                                                                                               ggCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGccc                                                >  2:1461423/1‑133 (MQ=255)                                                                                               ggCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGccc                                                <  1:1461423/133‑1 (MQ=255)                                                                                                                    aaGCCCCATGATAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATgcgg                    >  2:1203879/1‑140 (MQ=255)                                                                                                                              aTAATCACCTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGcc          <  2:1137674/140‑1 (MQ=255)                                                                                                                                     ccTGTGAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCg   >  2:1039441/1‑140 (MQ=255)                                                                                                                                      cTGTGAAGCGTTACGGGTTGACTCACAAAGTATAGATCTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCgg  <  1:478717/140‑1 (MQ=39)                                                                                                                                          |                                                                                                                                        CACTTTGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGG  >  NC_000913/3877342‑3877614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑