BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,931,949	A→G	T212A (ACG→GCG)	kup →	K(+):H(+) symporter Kup

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,931,949	0	A	G	99.4%	549.4 / NA	156	T212A (ACG→GCG)	kup	K(+):H(+) symporter Kup
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (73/82); minor base T (1/0); total (74/82)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 159 total aligned reads displayed.

GTAAGCTGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAACGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGACCC  >  NC_000913/3931812‑3932084

gTAAGCTGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCg                                                                                                                                       >  1:331320/1‑140 (MQ=255)

gTAAGCTGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCg                                                                                                                                       >  1:1344150/1‑140 (MQ=255)

  aaGCTGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGt                                                                                                                                     <  2:1526788/140‑1 (MQ=255)

  aaGCTGTTTGCGCCGATCATGCGGAGCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGt                                                                                                                                     <  1:601670/140‑1 (MQ=255)

     cTGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTc                                                                                                                                  <  1:341630/140‑1 (MQ=255)

      tGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGAGGTTTCt                                                                                                                                 >  1:1021706/1‑140 (MQ=255)

         ttGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCtttt                                                                                                                              >  2:1326563/1‑140 (MQ=255)

          tGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTa                                                                                                                             >  1:786150/1‑140 (MQ=255)

          gagacagATCATGCTCACCTGGTTTCTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTa                                                                                                                             <  1:649289/134‑1 (MQ=255)

           gcgcCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTAt                                                                                                                            >  1:952852/1‑140 (MQ=255)

            cgcCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTAtt                                                                                                                           <  1:199212/140‑1 (MQ=255)

                gATCATGCTGACCTGCTTTTTGCTTATGGAAGGACTGTGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCAt                                                                                                                       <  1:595414/140‑1 (MQ=255)

                   cATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAg                                                                                                                    <  2:757427/140‑1 (MQ=255)

                    aTGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAgg                                                                                                                   <  1:1440350/140‑1 (MQ=255)

                        tGACCTGGTTTTTGATTCTGGCGGGACTGGGGTTACGTAGCATTATTGTTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCa                                                                                                               <  2:470857/140‑1 (MQ=255)

                           ccTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCACTTCTTCCTTGAAGACACAGCGGTTTCTTTTTTTGCATTAGGGGCAgtg                                                                                                            >  2:547296/1‑140 (MQ=255)

                            cTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAgtgg                                                                                                           >  1:970315/1‑140 (MQ=255)

                            cTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTCAATCCAAAGCGGTTTCGTTTAATGCATTAgggctgtctc                                                                                                           >  2:649289/1‑133 (MQ=255)

                             tGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAgtggt                                                                                                          <  2:1344150/140‑1 (MQ=255)

                               gTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGgtgt                                                                                                        >  1:150201/1‑140 (MQ=255)

                               gTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAACACAAATCGGTTTCTTTTATTGCGTTAGGGGAAGTGgtgt                                                                                                        >  2:727429/1‑140 (MQ=255)

                                tttttGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGagtt                                                                                                       <  2:942332/140‑1 (MQ=255)

                                    tGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCg                                                                                                   >  2:1454748/1‑140 (MQ=255)

                                        tCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTa                                                                                               <  1:1454748/140‑1 (MQ=255)

                                          tGGCAGGACTGGGGTTACGTAGCATTATTGCTAGCCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACg                                                                                             <  1:1053220/140‑1 (MQ=255)

                                                 aCTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCg                                                                                      >  1:862162/1‑140 (MQ=255)

                                                  cTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGa                                                                                     <  1:813723/140‑1 (MQ=255)

                                                   tGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAg                                                                                    <  2:150201/140‑1 (MQ=255)

                                                    ggggTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAgg                                                                                   <  1:1457316/140‑1 (MQ=255)

                                                     gggTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgc                                                                                  <  1:1326563/140‑1 (MQ=255)

                                                      ggTTACGTAGCATTATTGCTAAGCCAGAACTGCTGCACGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgcg                                                                                 <  1:734780/140‑1 (MQ=255)

                                                      ggTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgcg                                                                                 <  2:970315/140‑1 (MQ=255)

                                                      ggTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgcg                                                                                 <  2:6011/140‑1 (MQ=255)

                                                      ggTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGAGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgcg                                                                                 <  2:1021706/140‑1 (MQ=255)

                                                      ggTTACGTAGCATTAATGCTAATCCCGAACTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgcg                                                                                 <  1:734326/140‑1 (MQ=255)

                                                         tACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTg                                                                              <  2:901262/140‑1 (MQ=255)

                                                         tACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTg                                                                              <  2:1257472/140‑1 (MQ=255)

                                                          aCGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCg                                                                                      >  2:21268/1‑131 (MQ=255)

                                                          aCGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgcgc                                                                                <  1:1251092/137‑1 (MQ=255)

                                                          aCGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCt                                                                               >  2:1135571/1‑138 (MQ=255)

                                                          aCGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCt                                                                               <  1:1135571/138‑1 (MQ=255)

                                                          aCGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGt                                                                             >  2:1106523/1‑140 (MQ=255)

                                                           cGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgcgc                                                                                >  1:888022/1‑136 (MQ=255)

                                                           cGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGgcgc                                                                                <  2:888022/136‑1 (MQ=255)

                                                           cGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTa                                                                            >  1:1262643/1‑140 (MQ=255)

                                                              aGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGc                                                                         <  1:364566/140‑1 (MQ=255)

                                                               gCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGGCGAGTAGGGGGGTCGAGGCGCTGTATGCt                                                                        >  1:545281/1‑140 (MQ=255)

                                                                 attattGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATAAGGGGCAGTGGTATCGCCGATTACGAGGGTCGAGGCGCTATATGCTGa                                                                      >  2:734780/1‑140 (MQ=255)

                                                                    attGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGatat                                                                   >  2:1295200/1‑140 (MQ=255)

                                                                     ttGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTg                                                                              <  2:182684/128‑1 (MQ=255)

                                                                     ttGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTg                                                                              >  1:182684/1‑128 (MQ=255)

                                                                     ttGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGACGATTACGGGGGTCGAg                                                                                    >  1:909285/1‑122 (MQ=255)

                                                                       gCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATggg                                                                <  1:1044106/140‑1 (MQ=255)

                                                                        cTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACTGGGGTCGAGGCGCTGTATGCTGATATgggg                                                               <  2:952852/140‑1 (MQ=255)

                                                                        cTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATgggg                                                               <  1:978061/140‑1 (MQ=255)

                                                                          aaCCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGTGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCa                                                             >  1:136873/1‑140 (MQ=255)

                                                                               ggAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGCTGTCGATTGCGGGGGTCGAGGCGCTATATGGTGATATGGGGCACTTTg                                                        >  2:569026/1‑140 (MQ=255)

                                                                                 aaGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGt                                                      >  2:242709/1‑140 (MQ=255)

                                                                                 aaGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGt                                                      <  2:1300404/140‑1 (MQ=255)

                                                                                  aGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTa                                                     <  2:331320/140‑1 (MQ=255)

                                                                                      ctgcATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGtt                                                 >  1:1086731/1‑140 (MQ=255)

                                                                                       tgcATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTc                                                >  1:1222308/1‑140 (MQ=255)

                                                                                              gcTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTc                                         >  2:1039232/1‑140 (MQ=255)

                                                                                                      cAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCg                                 >  1:1093872/1‑140 (MQ=255)

                                                                                                      cAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCg                                 <  1:11300/140‑1 (MQ=255)

                                                                                                        aTGTGGGCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTg                               >  2:280716/1‑140 (MQ=255)

                                                                                                            gggCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGcc                                      <  1:230135/129‑1 (MQ=255)

                                                                                                            gggCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGcc                                      >  2:230135/1‑129 (MQ=255)

                                                                                                            gggCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGtt                            >  1:150269/1‑139 (MQ=255)

                                                                                                            gggCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTc                           >  1:1288577/1‑140 (MQ=255)

                                                                                                             ggCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCa                          >  2:649018/1‑140 (MQ=255)

                                                                                                              gCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGGTGATATGGGGCAGTTTGGTAAGTTCCCTATGCGCCTGGCGTGGTTCAc                         >  2:469534/1‑140 (MQ=255)

                                                                                                              gCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCAc                         >  2:1241424/1‑140 (MQ=255)

                                                                                                              gCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCAc                         <  1:280716/140‑1 (MQ=255)

                                                                                                              gCGGTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCAc                         >  2:786293/1‑140 (MQ=255)

                                                                                                                ggTGCATTTCTTCCTTGAATACTAAGCGGCTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACcg                       <  1:569026/140‑1 (MQ=255)

                                                                                                                ggTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGTGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACcg                       <  2:136873/140‑1 (MQ=255)

                                                                                                                 gTGCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGCTATGGGGCCCTTAGGTTAGTTCCCTGTTCGTCTGGCGTGGTTCACcgt                      >  2:705575/1‑140 (MQ=255)

                                                                                                                  tGCATTTCTTCCTTGCATACAACGCTGTTCCTTTTATCGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACcgtc                     <  1:416530/140‑1 (MQ=255)

                                                                                                                   gCATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACcgtcg                    <  2:1262643/140‑1 (MQ=255)

                                                                                                                    cATTTCTTCCTTGAATACAAAGCGGTTTCTTTTATTGCACTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACcgtcgt                   <  2:448673/140‑1 (MQ=255)

                                                                                                                    cATTTCTTCCTTGAATACAAAGCGGTTTCTTTCATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACcgtcgt                   <  1:990768/140‑1 (MQ=255)

                                                                                                                         cttcCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAc              <  1:131058/140‑1 (MQ=255)

                                                                                                                          ttcCTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAcc             <  1:649018/140‑1 (MQ=255)

                                                                                                                            ccTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAcctt           >  1:389898/1‑140 (MQ=255)

                                                                                                                            ccTTGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTCGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAcctt           >  2:769529/1‑140 (MQ=255)

                                                                                                                              ttGAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAccttcc         >  2:1075445/1‑140 (MQ=255)

                                                                                                                               tGAATACAAAGCGGTTTCTTTTTTTGCATTAGGGGCAATGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAccttcct        <  1:547296/140‑1 (MQ=255)

                                                                                                                                gAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCTCTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAccttcctt       <  2:862162/140‑1 (MQ=255)

                                                                                                                                gAATACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAccttcctt       <  1:786293/140‑1 (MQ=255)

                                                                                                                                gAATACAAAGCGGTTTCTTTTATTGAATTTGGGGCAGAGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAccttcctt       <  1:705575/140‑1 (MQ=255)

                                                                                                                                 aaTACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAccttcctt       >  2:1477681/1‑139 (MQ=255)

                                                                                                                                 aaTACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAcc             >  1:275497/1‑133 (MQ=255)

                                                                                                                                 aaTACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTAcc             <  2:275497/133‑1 (MQ=255)

                                                                                                                                 aaTACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGAAAGTTCCCCATTTGCCCGGCGTGGTCCACCTTCGTATTACCTTCCTTg      >  2:581288/1‑140 (MQ=255)

                                                                                                                                  aTACAAAGCGGTTTCTTTTATTCCATTAGGGCCAGTGGTATTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGa     <  2:613898/140‑1 (MQ=255)

                                                                                                                                   tACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGa     >  2:1054139/1‑139 (MQ=255)

                                                                                                                                   tACAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGa     <  1:1054139/139‑1 (MQ=255)

                                                                                                                                    aCAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGAcc   <  2:807420/140‑1 (MQ=255)

                                                                                                                                     cAAAGCGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGAccc  >  2:294901/1‑140 (MQ=255)

GTAAGCTGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAACGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGACCC  >  NC_000913/3931812‑3932084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`