BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,960,276	A→G	pseudogene (185/449 nt)	yifN ←	putative toxin YifN

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,960,276	0	A	G	100.0%	406.7 / NA	117	pseudogene (185/449 nt)	yifN	putative toxin YifN
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/66); total (51/66)

Only 100 of 129 total aligned reads displayed.

TGACTTGTTGTACCAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAACGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCAA  >  NC_000913/3960140‑3960411

tgactTGTTGTACCAGGTCGGCTTTGGCCCACCGAATCTTCTGATCAATGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      <  2:535944/140‑1 (MQ=255)

tgactTGTTGTACCAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      <  1:650496/140‑1 (MQ=255)

tgactTGTTGTACCAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      <  2:1402320/140‑1 (MQ=255)

tgactTGTTGTACCAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      <  2:274651/140‑1 (MQ=255)

tgactTGTTGTACCAGGTCGGCCTTGGCCCAACGACTCTTCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      <  2:730453/140‑1 (MQ=255)

   ctTGTTGTACCAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGcgacga                                                                                                                                   >  1:818801/1‑140 (MQ=255)

            ccAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      <  1:101387/128‑1 (MQ=255)

            ccAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGt                                                                                                                          >  1:855351/1‑140 (MQ=255)

            ccAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGCTCGCGAGGGGTGGAGAATGGAGCGACGatgctgtctc                                                                                                                          >  1:426389/1‑134 (MQ=255)

              aGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTg                                                                                                                        >  2:1486215/1‑140 (MQ=255)

                gTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      <  1:1185664/124‑1 (MQ=255)

                gTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      >  2:1185664/1‑124 (MQ=255)

                 tCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCa                                                                                                                     >  1:1128033/1‑140 (MQ=255)

                 tCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCa                                                                                                                     >  1:902301/1‑140 (MQ=255)

                 tCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCCCGAGTGGCTGATAATGGAGCGCCGATGCATGCGTTGCCa                                                                                                                     >  2:589416/1‑140 (MQ=255)

                 tCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATACATTCCACGTTTTAACTTGTCTGGTCGCCAGTGGTTGATAATGAAGCGACAATGCATGCGTTGCCa                                                                                                                     >  1:610646/1‑140 (MQ=255)

                 tCGGCCTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAgcga                                                                                                                                      <  2:546431/123‑1 (MQ=255)

                    gCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGt                                                                                                                          >  1:1338796/1‑132 (MQ=255)

                    gCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGt                                                                                                                          <  2:1338796/132‑1 (MQ=255)

                    gCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTa                                                                                                                  >  2:224568/1‑140 (MQ=255)

                    gCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTa                                                                                                                  >  1:879515/1‑140 (MQ=255)

                         ggCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAAtttt                                                                                                             >  2:1287247/1‑140 (MQ=255)

                          gCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAAttttt                                                                                                            <  2:666871/140‑1 (MQ=255)

                               aCGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGtt                                                                                                       >  1:102929/1‑140 (MQ=255)

                               aCGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTCCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGtt                                                                                                       <  2:858304/140‑1 (MQ=255)

                                cGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTg                                                                                                      <  2:1041659/140‑1 (MQ=255)

                                cGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTg                                                                                                      <  2:1402723/140‑1 (MQ=255)

                                cGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTg                                                                                                      <  2:1041641/140‑1 (MQ=255)

                                cGAATCTGATGATCAAGGAATTCCAGGTCAAGGATGACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTg                                                                                                      <  2:753395/140‑1 (MQ=255)

                                 gAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGa                                                                                                     <  2:902301/140‑1 (MQ=255)

                                  aaTCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAg                                                                                                    <  2:855351/140‑1 (MQ=255)

                                  aaTCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAg                                                                                                    <  2:504947/140‑1 (MQ=255)

                                  aaTCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAg                                                                                                    <  2:102929/140‑1 (MQ=255)

                                  aaTCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAg                                                                                                    <  1:928974/140‑1 (MQ=255)

                                  aaTCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAg                                                                                                    <  1:331973/140‑1 (MQ=255)

                                     ctgctgATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCAc                                                                                                 <  1:181178/140‑1 (MQ=255)

                                     ctgctgATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCAATAATTTTTCCGTTGAGCAc                                                                                                 <  1:1098987/140‑1 (MQ=255)

                                           aTCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAAc                                                                                           >  1:1218233/1‑140 (MQ=255)

                                               aaGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAAc                                                                                       <  1:909397/140‑1 (MQ=255)

                                                aGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAAcc                                                                                      <  1:153675/140‑1 (MQ=255)

                                                     tGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGttt                                                                                 >  1:1012440/1‑140 (MQ=255)

                                                            cATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCa                                                                          >  2:798543/1‑140 (MQ=255)

                                                            cATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGGTGCCATTATTTTGTCCGTTGAGCACGACAAATAACCTGTTTTTTATCa                                                                          >  2:401595/1‑140 (MQ=255)

                                                                   gaCATTACTGGCTATTTTAACATGCATTCCGTGGTATAAGTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCagg                                                                   <  2:720428/139‑1 (MQ=255)

                                                                    aCATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCagga                                                                  <  2:299166/140‑1 (MQ=255)

                                                                        tACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATc                                                                           >  1:1293682/1‑127 (MQ=255)

                                                                         aCTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAAt                                                             >  1:257396/1‑140 (MQ=255)

                                                                         aCTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAAt                                                             <  2:1118447/140‑1 (MQ=255)

                                                                         aCTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTCTCCGTTGAGCACAACAGCTAACCTGATTTTTATCATTTCAGGAGGAAt                                                             >  2:549705/1‑140 (MQ=255)

                                                                           tGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGc                                                           <  1:1287247/140‑1 (MQ=255)

                                                                            ggCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCg                                                          <  2:257396/140‑1 (MQ=255)

                                                                             gCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCTTTGAGCACAACAACTATCCTGTTTTTTATCGCTTCAGGAAGAATGTgg                                                         >  2:707371/1‑140 (MQ=255)

                                                                              cTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGc                                                        <  1:1050640/140‑1 (MQ=255)

                                                                              cTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGc                                                        <  2:1181595/140‑1 (MQ=255)

                                                                              cTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGc                                                        <  2:1128033/140‑1 (MQ=255)

                                                                              cTATTTCAACATGCATTCCACGATTTAACTTCTCTCGTCCCGAGTGGTAGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGc                                                        <  2:402033/140‑1 (MQ=255)

                                                                              cTATTTCAACATGCACTCCACGATTTAACATGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGc                                                        <  1:401595/140‑1 (MQ=255)

                                                                               tATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTATTTCTTGTCATTTGAGGAGGAATGCGGcc                                                       >  1:720428/1‑140 (MQ=255)

                                                                                aTTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCa                                                      >  2:352504/1‑140 (MQ=255)

                                                                                aTTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCa                                                      <  2:294307/140‑1 (MQ=255)

                                                                                aTTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCa                                                      <  2:1498134/140‑1 (MQ=255)

                                                                                aTTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCa                                                      >  2:825706/1‑140 (MQ=255)

                                                                                aTTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCa                                                      >  1:259621/1‑140 (MQ=255)

                                                                                aTTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCa                                                      <  2:1012440/140‑1 (MQ=255)

                                                                                aTTTCAACATGCATTCCACGTTGTATCTTGTCTGGTCACGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCa                                                      <  1:603396/140‑1 (MQ=255)

                                                                                  ttCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATc                                                    >  1:167423/1‑140 (MQ=255)

                                                                                       cATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGGCAACTAACCTGTATTTTATCATTTCAGGAGTAATGCGGCCATCGTAAt                                               >  2:582445/1‑140 (MQ=255)

                                                                                       cATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGACTGCGGCCATCGTAAt                                               >  1:587529/1‑140 (MQ=255)

                                                                                       cATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAAt                                               >  1:143311/1‑140 (MQ=255)

                                                                                         tGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATAc                                             >  2:761881/1‑140 (MQ=255)

                                                                                          gCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATAcg                                            <  2:879515/140‑1 (MQ=255)

                                                                                          gCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATAcg                                            <  1:224568/140‑1 (MQ=255)

                                                                                          gCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATAcg                                            <  2:368403/140‑1 (MQ=255)

                                                                                          gCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATAcg                                            <  2:818801/140‑1 (MQ=255)

                                                                                           cATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGc                                                        >  2:770653/1‑127 (MQ=255)

                                                                                            aTTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATAcgtc                                          >  2:1063824/1‑140 (MQ=255)

                                                                                                cACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGc                                      >  1:1408949/1‑140 (MQ=255)

                                                                                                   gTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATGTCAGGAGAAATGCGGCCATCGTAATTCGTCGTGCTGa                                   >  1:399667/1‑140 (MQ=255)

                                                                                                       tAACTTGTCTGGTCGTGAGTGGCTGTTAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACgg                               <  1:582445/140‑1 (MQ=255)

                                                                                                              tCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCAttt                        >  2:766368/1‑140 (MQ=255)

                                                                                                              tCTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATATCAGGAGGGATGGGGCGATCGTAATGCGTCTTGCTGAACGGTCCAttt                        >  2:466716/1‑140 (MQ=255)

                                                                                                               cTGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCTGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCAtttt                       >  2:1473300/1‑140 (MQ=255)

                                                                                                                tGGTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTg                      <  1:1091726/140‑1 (MQ=255)

                                                                                                                  gTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGc                    <  1:1252784/140‑1 (MQ=255)

                                                                                                                  gTCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGc                    <  1:761881/140‑1 (MQ=255)

                                                                                                                  gTCGCGAGTGGTTGAAAATGGAGCGTCGATGCATGCGGTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGTGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGc                    <  1:707371/140‑1 (MQ=255)

                                                                                                                   tCGCGAGTGGTTGATAATGGAGTGACGATACATGCGTGGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGGCGTGCTGAACGGTCCATTTTGGCt                   <  1:549705/140‑1 (MQ=255)

                                                                                                                   tCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACGACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCt                   <  1:86816/140‑1 (MQ=255)

                                                                                                                   tCGCGAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCt                   >  1:862898/1‑140 (MQ=255)

                                                                                                                     gcgAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATTCGTCGTGCTGAACGGTCCATTTTGGCTaa                 <  2:1094824/140‑1 (MQ=255)

                                                                                                                     gcgAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTaa                 <  1:143868/140‑1 (MQ=255)

                                                                                                                      cgAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAAc                >  1:816640/1‑140 (MQ=255)

                                                                                                                      cgAGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAAc                <  1:1442720/140‑1 (MQ=255)

                                                                                                                        aGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTg                      >  1:812031/1‑132 (MQ=255)

                                                                                                                        aGTGGTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTg                      <  2:812031/132‑1 (MQ=255)

                                                                                                                            gTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATa          >  2:955114/1‑140 (MQ=255)

                                                                                                                            gTTGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATa          >  1:557455/1‑140 (MQ=255)

                                                                                                                              tGATAATGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGt        <  2:1408949/140‑1 (MQ=255)

                                                                                                                                   aTGGAGCGACGATGCATTCGTTTCCATTAATGTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCa   <  2:610646/140‑1 (MQ=255)

                                                                                                                                    tGGAGCGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCaa  >  1:1187833/1‑140 (MQ=255)

TGACTTGTTGTACCAGGTCGGCTTTGGCCCAACGAATCTGCTGATCAAAGAATTGCAGGTCATTGATAACATTACTGGCTATTTCAACATGCATTCCACGTTTTAACTTGTCTGGTCGCGAGTGGTTGATAATGGAACGACGATGCATGCGTTGCCATTAATTTTTCCGTTGAGCACGACAACTAACCTGTTTTTTATCATTTCAGGAGGAATGCGGCCATCGTAATACGTCGTGCTGAACGGTCCATTTTGGCTAACAGGATAGTTACCAA  >  NC_000913/3960140‑3960411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`