| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,003,610 | G→A | A190V (GCG→GTG) | rarD ← | putative transporter RarD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,003,610 | 0 | G | A | 96.9% | 324.6 / NA | 98 | A190V (GCG→GTG) | rarD | putative transporter RarD |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (49/46); minor base C (0/3); total (49/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GCGGCGGTAAAACACAACAGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCGCCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCC > NC_000913/4003481‑4003745 | gcggcgGTAAAACACAACAGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGgcag < 2:306921/140‑1 (MQ=255)gcggcgGTAAAACACAACAGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGgcag < 2:1054868/140‑1 (MQ=255) cggTAAAACACAACAGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGTAATAGCAGACAAGTTAATTGCCACCACGGGCagcagc > 1:747008/1‑140 (MQ=255) aaaaCACAACAGCGGTACGGTATTGACAATAGCGGTGGCTATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCc‑aca < 2:435325/140‑1 (MQ=255) aaaaCACAACAGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCc‑aca < 1:263049/140‑1 (MQ=255) aaaaCACAACAGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCc‑aca < 1:349821/140‑1 (MQ=255) aaaaCACAACAGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCc‑aca < 1:347013/140‑1 (MQ=255) acaGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAAGTAAATTTCCATCAGGGGCAGAAGCC‑ACATGGTTTCg > 1:661620/1‑140 (MQ=255) caGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGa > 2:1219949/1‑140 (MQ=255) gCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGAtt > 2:98938/1‑140 (MQ=255) cggtacggtaGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATCGTTTCGATTa < 2:934840/140‑1 (MQ=255) gtacggtaGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAAc > 1:1497242/1‑140 (MQ=255) gTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGtt < 2:22908/123‑1 (MQ=255) gTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGtt > 1:22908/1‑123 (MQ=255) gTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGAt < 1:1477512/128‑1 (MQ=255) gTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGAt > 2:1477512/1‑128 (MQ=255) gACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGttt > 2:146763/1‑140 (MQ=255) aCAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTg > 2:186201/1‑140 (MQ=255) aTACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTgcgc > 2:117969/1‑140 (MQ=255) tACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCAAAATGGCGGGTTGGGTTTCCGGCAA‑AGGAAACCGGGAAAATGGCACCCCCGGCCGGAACCAAAATGGTTTGGTTTAACATCCCGG‑TTGCGCtt > 2:1316925/1‑140 (MQ=255) aCCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGTCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCtt > 1:153075/1‑140 (MQ=255) aCCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGGAGCC‑ACAGGGTGTCGATTAACGTGCCGGTTTGCGCtt > 1:419974/1‑140 (MQ=255) ggcggcGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGTC‑ACATGGTTTCTATTAACATGCCGGTTTGCGCTTCaa > 1:616073/1‑140 (MQ=255) gcggcgATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCG‑ACATGGTATCGATTAACATGCAGGTTTGCGCTTCAAc > 1:594820/1‑140 (MQ=255) gcggcgATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAAc < 1:227285/140‑1 (MQ=255) gcggcgATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAAc > 2:1401854/1‑140 (MQ=255) cggcgATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACg > 2:787723/1‑140 (MQ=255) ggcgATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACgg < 1:1219949/140‑1 (MQ=255) gcgATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGc > 1:169095/1‑140 (MQ=255) gcgATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTATCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGc > 2:886936/1‑140 (MQ=255) gcgATCAGCAGTAAATTCAGCGACATCGGGGTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCT‑ACATGGGTTCGATTAACATGCCGGTTTGCGCTTCAACGGc > 2:1049315/1‑140 (MQ=255) cgATCAGCAGTAAATGCAGCGAGATTGGGATTTGCCCAATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCa < 1:461561/140‑1 (MQ=255) aTCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAACAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAAt > 1:1373299/1‑140 (MQ=255) gcagTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAAtcttc < 2:1297407/140‑1 (MQ=255) agTAAATTCAGCGACATTGGGTCTTGCCCCATATGGCTGATTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATcttctt < 2:594820/140‑1 (MQ=255) agTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATcttctt < 2:169095/140‑1 (MQ=255) agTAAATTCAGCGACATCGGGTTTTGCCCCAAATGTCTGCTTGAGCTGCCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATcttctt < 2:584367/140‑1 (MQ=255) tAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATGAACATGCTGGTGTGCGCTTCAGCGGCAATCTTCTTGc > 1:637087/1‑140 (MQ=255) aaaTTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCg > 2:631999/1‑140 (MQ=255) aaTTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGGTTCAACAGCAATCTTCTTGCGt > 1:687239/1‑140 (MQ=255) aaTTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGATTTGCGTTTCAACAGCAATCTTCTTGCGt > 1:461007/1‑140 (MQ=255) aTTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAACAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTa < 2:1373299/140‑1 (MQ=255) aTTCAGCGACATCGGCTTTTGCACCCTATCGCTGGTTCAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTa < 1:400317/140‑1 (MQ=255) tCAGCGACATCGGGTTTTGCCCTATATGGCTCGTTCAGCCGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTAcc < 2:419974/140‑1 (MQ=255) aGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAg > 1:339070/1‑140 (MQ=255) aGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAg > 2:865940/1‑140 (MQ=255) aGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAg > 1:235970/1‑140 (MQ=255) aGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAg > 1:3066/1‑140 (MQ=255) aGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAg > 1:99762/1‑140 (MQ=255) aGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTACAACGGCAATCTTCTTGCGTACCAg > 1:679823/1‑140 (MQ=255) aGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTCGCGCTTCATCGGCGATCTTCTTGCGTACCAg > 2:678656/1‑140 (MQ=255) gCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGa < 2:3066/140‑1 (MQ=255) gCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGa < 2:339070/140‑1 (MQ=255) gCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGa < 2:1497242/140‑1 (MQ=255) cGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGAc > 1:389291/1‑140 (MQ=255) gACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGAcc > 2:14501/1‑140 (MQ=255) aTCGGGTTTTGCCCCATTTGGCTGGTTGAGCTGACGGCAATAGCAAACTGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTa < 2:661620/140‑1 (MQ=255) aTCGGGTTTTGCCCCATATGGCTGGTTGAGCGGTCCGCAGTAGCAAACTGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTa < 2:637087/140‑1 (MQ=255) aTCGGGTTTTGCCCCATATGGCCGGGTGAGCTGTCGGTAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTa < 1:691858/140‑1 (MQ=255) gTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAgg < 2:235970/140‑1 (MQ=255) gTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAgg < 1:146763/140‑1 (MQ=255) gTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAgg < 1:186201/140‑1 (MQ=255) gTTTTGCCCCATATGGCTGGTTAAGCTGTTGGCAATACCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAgg < 1:510924/140‑1 (MQ=255) tttGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCa < 1:1306439/140‑1 (MQ=255) ttGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGATTTGCGCTGCAAAGGCCATCTTCTTGCGTAACAGACCGTAGAAGGCaa > 2:415720/1‑140 (MQ=255) tGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCaaa > 2:41114/1‑140 (MQ=255) ccccATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAAc > 2:17103/1‑140 (MQ=255) atatGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCATTCTTCTTCCGTACCGGACCGTAGAAGGCAAAACTaaa > 1:602063/1‑140 (MQ=255) cTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAg > 2:107960/1‑140 (MQ=255) cTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAg > 1:1346857/1‑140 (MQ=255) gTTGAGTTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGCCCGCAGTAGGCAACACTAAATGCCAGTcc > 1:696069/1‑140 (MQ=255) ttGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTccc < 1:1429607/140‑1 (MQ=255) ttGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTccc < 1:41114/140‑1 (MQ=255) tGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGc < 2:1288411/132‑1 (MQ=255) tGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGc > 1:1288411/1‑132 (MQ=255) tGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCa > 1:1194718/1‑140 (MQ=255) tGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGCACCAGACTGTACAAAGCAAAATTAAATGCCAGTCCCa > 1:503290/1‑140 (MQ=255) gAGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCAAGTCCCAg < 2:1448193/140‑1 (MQ=255) aGCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAgc < 1:886936/140‑1 (MQ=255) gCTGTCGGTAATAGCAGACAGGCAAATTGCCCCCACGGGTAGCAGCC‑AGATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAgcg < 2:747008/140‑1 (MQ=255) gCTGTCGGCAATAGCAATCAGGGAAATTGCCCCCATGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAgcg < 2:616073/140‑1 (MQ=255) gCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAgcg < 2:1346857/140‑1 (MQ=255) gCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAgcg < 1:1316925/140‑1 (MQ=255) gCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAgcg < 2:1492626/140‑1 (MQ=255) gCTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAgcg < 1:865940/140‑1 (MQ=255) cTGTCGGCAATAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAgcgc > 2:801879/1‑140 (MQ=255) tGTCGGCAATAGCAACCAGGTACATAGCCCCCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGcgcg < 1:415720/140‑1 (MQ=255) tGTCGGCAATAGCAAACGGGTATATTGCCACGACGTGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGcgcg < 2:679823/140‑1 (MQ=255) ggCAATAGCAAACAGGTAAATTGCCACCACAGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGataa > 1:291805/1‑140 (MQ=255) aaTAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAg > 2:1541722/1‑140 (MQ=255) tAGCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGt > 1:783035/1‑140 (MQ=255) gCAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAg < 2:783035/140‑1 (MQ=255) cAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGTGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAg < 1:844357/124‑1 (MQ=255) cAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGTAAAACTAGATGCCAATCCCAGTGCGATAATAGGTAGc > 1:615451/1‑140 (MQ=255) cAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAg > 2:844357/1‑124 (MQ=255) cAAACAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGc > 2:3215/1‑140 (MQ=255) aaCAGGTAAATTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGa < 1:1401854/140‑1 (MQ=255) aaaTTGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCaaaa > 1:802451/1‑140 (MQ=255) ttGCCACCACGGGCAGCCGCC‑ACATGGTTTCCATTAACATGCCGGTTTCCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTc < 2:615451/140‑1 (MQ=255) tGCCACCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTcc < 1:787723/140‑1 (MQ=255) | GCGGCGGTAAAACACAACAGCGGTACGGTAGTGACAATACCGGCGGCGATCAGCAGTAAATTCAGCGACATCGGGTTTTGCCCCATATGGCTGGTTGAGCTGTCGGCAATAGCAAACAGGTAAATTGCCGCCACGGGCAGCAGCC‑ACATGGTTTCGATTAACATGCCGGTTTGCGCTTCAACGGCAATCTTCTTGCGTACCAGACCGTAGAAGGCAAAACTAAATGCCAGTCCCAGCGCGATAATAGGTAGCGAACCAAAAGTCC > NC_000913/4003481‑4003745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |