BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,189,927	A→G	T48A (ACC→GCC)	yjaZ →	conserved protein YjaZ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,189,927	0	A	G	100.0%	403.2 / NA	115	T48A (ACC→GCC)	yjaZ	conserved protein YjaZ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (47/68); total (47/68)

Only 100 of 120 total aligned reads displayed.

ACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGCA  >  NC_000913/4189791‑4190053

aCAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCt                                                                                                                             <  2:1247896/140‑1 (MQ=255)

   ggAAGTGGAAAAGTGTCGACCTATTCGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTAct                                                                                                                          <  1:441722/140‑1 (MQ=255)

   ggAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTAct                                                                                                                          <  1:1394651/140‑1 (MQ=255)

   ggAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTAct                                                                                                                          <  2:343490/140‑1 (MQ=255)

    gAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCt                                                                                                                             <  1:1038928/136‑1 (MQ=255)

    gAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCt                                                                                                                             >  2:1038928/1‑136 (MQ=255)

      aGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGACTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTActctc                                                                                                                       >  2:1439811/1‑140 (MQ=255)

        tGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCtt                                                                                                                     <  2:1434543/140‑1 (MQ=255)

          gAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCa                                                                                                                   >  2:757606/1‑140 (MQ=255)

          gAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCa                                                                                                                   >  1:263590/1‑140 (MQ=255)

               gTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCt                                                                                                              <  1:907188/140‑1 (MQ=255)

               gTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATAATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCt                                                                                                              <  1:57996/140‑1 (MQ=255)

                  gCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTca                                                                                                           >  1:1157849/1‑140 (MQ=255)

                  gCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTCTTGGGTCGCCTACTCTCTTCACTGCTTca                                                                                                           >  1:636315/1‑140 (MQ=255)

                    gACCTTTTGGACATCCGTATGGTGATATTCGTGATCTATTATTTCTTGTTGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTcaca                                                                                                         <  2:449990/140‑1 (MQ=255)

                     aCCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATCTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACaa                                                                                                        >  1:1349999/1‑140 (MQ=255)

                      ccTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACaaa                                                                                                       <  1:1143057/140‑1 (MQ=255)

                      ccTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACaaa                                                                                                       <  2:1364370/140‑1 (MQ=255)

                         tttGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGa                                                                                                    <  2:1273254/140‑1 (MQ=255)

                           tGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGAtt                                                                                                  <  1:1189256/140‑1 (MQ=255)

                                aTCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGaa                                                                                             <  2:899018/140‑1 (MQ=255)

                                  ccGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACa                                                                                           >  1:1253877/1‑140 (MQ=255)

                                        ggTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGac                                                                                     >  2:1211672/1‑140 (MQ=255)

                                           gATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGacgaa                                                                                  <  1:1063035/140‑1 (MQ=255)

                                            atatTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGacgaac                                                                                 >  1:1355235/1‑140 (MQ=255)

                                            atatTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGacgaac                                                                                 >  1:19139/1‑140 (MQ=255)

                                                    gATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGaaaa                                                                         >  1:654770/1‑140 (MQ=255)

                                                    gATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCATCACAAAAGATCATCAACATCAGACGAACGAAGaaaa                                                                         >  1:506605/1‑140 (MQ=255)

                                                     aTTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGaaaaa                                                                        >  2:87164/1‑140 (MQ=255)

                                                      tttATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAAc                                                                       <  2:1330988/140‑1 (MQ=255)

                                                       ttATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGacgaa                                                                                  <  1:39080/128‑1 (MQ=255)

                                                       ttATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGacgaa                                                                                  >  2:39080/1‑128 (MQ=255)

                                                       ttATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACa                                                                      <  2:263590/140‑1 (MQ=255)

                                                       ttATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACa                                                                      <  1:112382/140‑1 (MQ=255)

                                                         gtCATTTCTTGATGCTCATCAGCCTGTCTACCTTCCGCATCATGAGGGGAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAAt                                                                    <  2:599090/139‑1 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACa                                                                      <  2:861703/138‑1 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACa                                                                      >  1:861703/1‑138 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAAt                                                                    <  1:1238528/140‑1 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAAt                                                                    <  2:1473502/140‑1 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAAt                                                                    <  2:1290459/140‑1 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAAt                                                                    >  1:207219/1‑140 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAAt                                                                    <  1:1461408/140‑1 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAAt                                                                    <  1:389283/140‑1 (MQ=255)

                                                         aTCATTTCTTGATGCTCATCAGCCTGTCTACTTTCTGCATCATGAGGGAAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAAt                                                                    <  2:506605/140‑1 (MQ=255)

                                                           cATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACTAAATATTATGAACATCCGACGTACGAAGAAAAACAATCg                                                                  >  2:542298/1‑140 (MQ=255)

                                                             tttCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTTGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGtt                                                                <  2:1196569/140‑1 (MQ=255)

                                                               tCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTaa                                                              >  1:1029855/1‑140 (MQ=255)

                                                                cTTGATGCTCATCAGGCTGTCTACGCTCATCATCATGTGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAAt                                                             <  1:739281/140‑1 (MQ=255)

                                                                   gATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTa                                                          >  2:259063/1‑140 (MQ=255)

                                                                     tGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAGCATCAGAAGAAGGATGAAAAAGAATCGTTAATGTAcc                                                        >  1:599090/1‑140 (MQ=255)

                                                                      gCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGTCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCa                                                       <  1:766541/140‑1 (MQ=255)

                                                                      gCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACAAACAAACAAAAACCATCGTTAATGTACCa                                                       >  1:549104/1‑140 (MQ=255)

                                                                        tcatcaGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCAcg                                                     <  1:1437212/140‑1 (MQ=255)

                                                                         catcaGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCAcgc                                                    >  2:813321/1‑140 (MQ=255)

                                                                           tcaGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACgcgc                                                  <  2:1349999/140‑1 (MQ=255)

                                                                               gCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTaa                                              >  2:887933/1‑140 (MQ=255)

                                                                                cTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTaaa                                             <  2:207219/140‑1 (MQ=255)

                                                                                   tCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGaa                                          >  1:311919/1‑140 (MQ=255)

                                                                                   tCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGaa                                          >  2:144039/1‑140 (MQ=255)

                                                                                        gTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCg                                     <  1:813321/140‑1 (MQ=255)

                                                                                         ttCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGt                                    >  2:17315/1‑140 (MQ=255)

                                                                                          tCAGCATCATGAGGGTAAAGAGTCTATAGTGTATCGCGTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTc                                   <  1:712765/140‑1 (MQ=255)

                                                                                           cAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTcc                                  <  2:654770/140‑1 (MQ=255)

                                                                                             gCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAGTCGTTAAAGTAGCAGGCGCCTCAAGAATCTCGTCCCt                                >  1:515646/1‑140 (MQ=255)

                                                                                             gCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCt                                >  1:235387/1‑140 (MQ=255)

                                                                                             gCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCt                                >  1:933506/1‑140 (MQ=255)

                                                                                             gCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCt                                >  1:1413738/1‑140 (MQ=255)

                                                                                             gCATCATGAGGGCAAAGAGCCTTTAGAGTAACGCTTTTGGGCTGCCTACTCTATTCACTGCTTCACAAAGGATTATGAACATAAGACGTACGTATATATACAATCGTTAATGTACCACGCGCCTCAAGTATCTCTTCCCt                                >  2:925065/1‑140 (MQ=255)

                                                                                              catcatGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCtt                               <  2:1157849/140‑1 (MQ=255)

                                                                                              catcatGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCtt                               <  1:144039/140‑1 (MQ=255)

                                                                                              catcatGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCtt                               <  1:259063/140‑1 (MQ=255)

                                                                                                   tGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAACAACAATCGCTAATGTATCACGCGCCGAAAGGATCTCGTCCCTTCTGcc                          >  2:471777/1‑140 (MQ=255)

                                                                                                   tGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCCCGCTCCTAAAGAAGCTCGTCCCTTCTGcc                          >  1:596689/1‑140 (MQ=255)

                                                                                                     aGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAg                        <  1:87164/140‑1 (MQ=255)

                                                                                                      gggCAAAGAGCCTTTAGAGTATTGCTTTTGGATTGCCTAGTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGc                       <  2:596689/140‑1 (MQ=255)

                                                                                                      gggCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAAAAATCGTTAATGTACCAAGCGCCTAACGAATATCGTCCCTTCTGCCAGc                       >  2:634653/1‑140 (MQ=255)

                                                                                                       ggCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCa                      >  1:821823/1‑140 (MQ=255)

                                                                                                        gCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCAc                     <  2:19139/140‑1 (MQ=255)

                                                                                                          aaaGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCg                   <  1:1009947/140‑1 (MQ=255)

                                                                                                          aaaGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCg                   <  1:335073/140‑1 (MQ=255)

                                                                                                          aaaGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTACCAGc                       <  2:1326283/136‑1 (MQ=255)

                                                                                                          aaaGAGCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTACCAGc                       >  1:1326283/1‑136 (MQ=255)

                                                                                                            agagCCTTTAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCAAGCGCCTACAGAGTCGCGTCCCTTCTGCCAGCACCGtt                 >  1:529738/1‑140 (MQ=255)

                                                                                                            agagCCTTTAGAGTATCGCTTTGGGGTTGCCTACTCTGTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGtt                 <  1:510925/140‑1 (MQ=255)

                                                                                                                   ttAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAGGTATCTCGTCCCTTCTGCCAGCACCGTTATAACtt          >  2:707914/1‑140 (MQ=255)

                                                                                                                    tAGAGTATCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTa         >  1:1138415/1‑140 (MQ=255)

                                                                                                                     agagTATCGCTTTTGAGTTGCCGACGCTCATCACTGCGTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAg        <  1:634653/140‑1 (MQ=255)

                                                                                                                          aTCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTTGACCCTTCTGCCCGCACCTTTATAACttctgtctc   >  2:727085/1‑133 (MQ=255)

                                                                                                                          aTCGCTTTTGGGTTGACTACTCGCTGCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAgcgcgc   <  1:648400/140‑1 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCTTACTCTCTTTACTCCTTCACATAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  <  1:498958/140‑1 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCTTACTCTCTTCACTACTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  <  1:543187/140‑1 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTTCTCTTTTCACTGCATCAAAAAGGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  <  2:549104/140‑1 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTACTCTTTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGACTCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  <  2:636315/140‑1 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  <  2:776293/140‑1 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  >  1:776293/1‑140 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  <  2:821823/140‑1 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  <  2:1138415/140‑1 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGca  >  1:1024687/1‑140 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGACTAAAGAAACTCATCCCTTCTGCCATCACCGTTATAACTTAGCGCGca  >  2:648400/1‑140 (MQ=255)

                                                                                                                           tCGCTTTTGGGTTGCCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGACTAAAGAAACTCATCCATTCTGCCACCACCGTTATAACTTAGCGCGca  >  2:543187/1‑140 (MQ=255)

ACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGCA  >  NC_000913/4189791‑4190053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`