| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,288,518 | A→G | N252S (AAC→AGC) | nrfA → | cytochrome c552 nitrite reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,288,518 | 0 | A | G | 97.5% | 269.1 / ‑2.7 | 81 | N252S (AAC→AGC) | nrfA | cytochrome c552 nitrite reductase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (36/42); total (38/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
CGGTCAGTGCCATGTGGAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAACTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCAAACT > NC_000913/4288390‑4288653 | cGGTCAGTGCCATGTGGAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCt > 1:222985/1‑131 (MQ=255) aGTGCCATGTGGAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACg > 2:130896/1‑140 (MQ=255) gTGCCATGTGGAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGc < 1:1191534/140‑1 (MQ=255) gCCATGTGGAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCa < 1:878420/140‑1 (MQ=255) ggAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGa < 2:1069495/140‑1 (MQ=255) gTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAg > 2:1172085/1‑140 (MQ=255) tATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAgc > 1:1251685/1‑140 (MQ=255) aTTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAgcg < 1:1330590/140‑1 (MQ=255) aTTACTTCGACGGCAAAAACAAAGCGGTTAAATTCACGTCGGATGACGCCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAgcg < 2:467156/140‑1 (MQ=255) ttACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAgcgc < 2:229555/140‑1 (MQ=255) cTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGGCTACCTCCCTGTCGAAAACGCAAATGCTGAAAGCgcagc > 2:499384/1‑140 (MQ=255) cTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCgcagc > 2:864860/1‑140 (MQ=255) cTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCgca > 2:771032/1‑138 (MQ=255) cTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCgca < 1:771032/138‑1 (MQ=255) cTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACGAGCTCCCGGTCGAATACGCCAATGCTGAAAGCgcagc > 1:503474/1‑140 (MQ=255) ttCGACGGCAAAAACAAAGCGGCTAAATTCCCGTGCGATTACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCgcagca < 2:552771/140‑1 (MQ=255) cGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATTACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAcc < 1:605713/140‑1 (MQ=255) cGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACACAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGcccc < 2:889975/140‑1 (MQ=255) cGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAcc < 2:1169113/140‑1 (MQ=255) cGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAcc > 2:1130871/1‑140 (MQ=255) cGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAcc > 2:274027/1‑140 (MQ=255) cGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAcc > 2:904778/1‑140 (MQ=255) cGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAcc > 2:1526642/1‑140 (MQ=255) gACGGCAAAAACAAACCGGTTAGATTCCCTTGGGATGTCGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAccc < 1:701110/140‑1 (MQ=255) aCGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAcc < 2:17288/138‑1 (MQ=255) aCGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCAcc > 1:17288/1‑138 (MQ=255) aCGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCg > 2:769313/1‑140 (MQ=255) aCGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCg < 1:904778/140‑1 (MQ=255) aCGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCg > 1:944349/1‑140 (MQ=255) cAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAat > 1:1040454/1‑140 (MQ=255) aaaaaCAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGGCGAAAACACCAATGTTGAAAGAGCAGCACCCGGAata > 1:552771/1‑140 (MQ=255) aaaaCAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAatat < 2:873386/140‑1 (MQ=255) aaaaCAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAatat < 1:178111/140‑1 (MQ=255) aaaaCAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAatat < 2:802484/140‑1 (MQ=255) aaaaCAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAatat < 1:130896/140‑1 (MQ=255) ccGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCAt > 1:757821/1‑140 (MQ=255) gTGGGATGACGTCATGAAATGCGGAATTATGGAGCAGTATTACGACAACATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTc > 2:1132131/1‑140 (MQ=255) gTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTc < 2:262823/140‑1 (MQ=255) gTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTc < 1:1130871/140‑1 (MQ=255) gTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTc > 1:1178342/1‑140 (MQ=255) gATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACgg < 1:861458/140‑1 (MQ=255) aTGACTGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGt < 2:802125/140‑1 (MQ=255) aTGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGt < 2:374654/140‑1 (MQ=255) aTGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAACTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGt > 2:85178/1‑140 (MQ=255) aTGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAaacaa > 2:1537937/1‑140 (MQ=255) tGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAaacaac < 2:1178342/140‑1 (MQ=255) tGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCACTGACTGGACTACCTCCCTGTCGTAAACGCCGAAGCCGAAACGGCCGCATCCGCAATATGAAATCTGGGCAGCGGGCATTCACGGTAAAatcaac < 2:376954/140‑1 (MQ=255) gAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACg > 2:1426765/1‑140 (MQ=255) aaaGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGt < 2:264936/140‑1 (MQ=255) aGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGa < 1:788087/140‑1 (MQ=255) cGAAAATATGGAGCAGTATTACGACAAAATTTCCTACTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCt < 2:503474/140‑1 (MQ=255) gAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAGTATGAAACCTGGACAGCGGGCATTCACGGTaaaa > 2:1331775/1‑127 (MQ=255) gAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAGTATGAAACCTGGACAGCGGGCATTCACGGTaaaa < 1:1331775/127‑1 (MQ=255) aaaaTATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGt < 1:1172085/140‑1 (MQ=255) tatGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCg < 1:1537937/140‑1 (MQ=255) cGACAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCaa > 1:1372638/1‑140 (MQ=255) aCAAAATTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGAACTATATCGAGTGCCATATGCCaaaa > 1:629204/1‑140 (MQ=255) aaaTTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGTACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTg > 2:261495/1‑140 (MQ=255) aaaTTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAACAACAACGCGACCTGTAGCGACAGCCATATGCCAAAAGTg > 2:652269/1‑140 (MQ=255) aaaTTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTg > 1:1441939/1‑140 (MQ=255) aaaTTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTg > 2:215177/1‑140 (MQ=255) aaaTTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTg > 1:143314/1‑140 (MQ=255) aaaTTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTg > 2:1415485/1‑140 (MQ=255) aaaTTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTg > 1:786733/1‑140 (MQ=255) aTTGCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCa < 1:1135959/140‑1 (MQ=255) gCCTTCTCTGACTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGaa > 2:1462816/1‑140 (MQ=255) aCTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGTACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 1:261495/140‑1 (MQ=255) aCTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 1:1462816/140‑1 (MQ=255) aCTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 2:1287809/140‑1 (MQ=255) aCTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 2:944349/140‑1 (MQ=255) aCTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 1:1415485/140‑1 (MQ=255) aCTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 1:864860/140‑1 (MQ=255) aCTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 2:1040454/140‑1 (MQ=255) aCTGGACTAGCTCCCTGTCGAAAACCCCACTGCTGAACGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 1:499384/140‑1 (MQ=255) cTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCa < 2:1372638/140‑1 (MQ=255) cTGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACACCGAAGGCa < 2:757821/140‑1 (MQ=255) cTGGACTAACTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCa < 1:85178/140‑1 (MQ=255) tGGACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCaa > 2:1100277/1‑140 (MQ=255) gACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc < 1:1420670/136‑1 (MQ=255) gACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGc > 2:1420670/1‑136 (MQ=255) gACTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCAAAc > 1:239886/1‑140 (MQ=255) aCTAGCTCCCTGTCGAAAACGCCTATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCAAAct > 2:310104/1‑140 (MQ=255) aCTAGCTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCAAAct > 2:1249038/1‑140 (MQ=255) | CGGTCAGTGCCATGTGGAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAACTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCAAACT > NC_000913/4288390‑4288653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |