Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,334,604 A→G C329C (TGT→TGC eptA ← phosphoethanolamine transferase EptA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,334,6040AG99.5% 669.2 / NA 186C329C (TGT→TGCeptAphosphoethanolamine transferase EptA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (85/100);  minor base C (1/0);  total (86/100)
Fisher's exact test for biased strand distribution p-value = 4.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 191 total aligned reads displayed.

TCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTACAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCACGGTACTGAA  >  NC_000913/4334470‑4334739
                                                                                                                                      |                                                                                                                                       
tCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGATGTTATGGCGAGGCACGGGGTCTCAGGCACCTTTGCAgcc                                                                                                                                    >  2:474911/1‑140 (MQ=255)
     ttGCAGGTTATTGATGTGCTCTGCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCAt                                                                                                                               <  2:507793/140‑1 (MQ=255)
      tGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATc                                                                                                                              >  1:514598/1‑140 (MQ=255)
      tGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATc                                                                                                                              >  2:310282/1‑140 (MQ=255)
        cAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGt                                                                                                                            >  1:1113549/1‑140 (MQ=255)
           gTTATTGATGTACTCTTGAAGCGCGTGGAACGGCAGTTCTTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGt                                                                                                                         <  2:539738/140‑1 (MQ=255)
           gTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGt                                                                                                                         <  1:1417591/140‑1 (MQ=255)
             tATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCa                                                                                                                       <  2:175965/140‑1 (MQ=255)
             tATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCa                                                                                                                       <  1:380541/140‑1 (MQ=255)
                  aTGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCca                                                                                                                  <  2:1051280/140‑1 (MQ=255)
                  aTGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCca                                                                                                                  <  1:295418/140‑1 (MQ=255)
                      aCTCTTCAAGCCCGTGGCACAGGACTTCGTCATAGTATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGc                                                                                                              <  2:517369/140‑1 (MQ=255)
                      aCTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGc                                                                                                              <  2:1396780/140‑1 (MQ=255)
                      aCTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGc                                                                                                              >  1:361567/1‑140 (MQ=255)
                       ctctTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCAt                                                                                                                               >  2:352089/1‑122 (MQ=255)
                       ctctTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCAt                                                                                                                               <  1:352089/122‑1 (MQ=255)
                       ctctTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCa                                                                                                             >  1:1199563/1‑140 (MQ=255)
                       ctctTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCa                                                                                                             >  2:128674/1‑140 (MQ=255)
                         ctTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACg                                                                                                           >  1:820933/1‑140 (MQ=255)
                          ttCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTTAGGCACGGGGTCGCAGGCACATTTACAGCCGCCATCGTTGTCATTCCACAGCACGt                                                                                                          >  2:464309/1‑140 (MQ=255)
                          ttCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGt                                                                                                          >  2:109263/1‑140 (MQ=255)
                            cAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACTTTTGCAGCCGCAATCGTTGTCCTTCCACAGCACGTTg                                                                                                        >  1:517369/1‑140 (MQ=255)
                            cAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTg                                                                                                        >  2:1444742/1‑140 (MQ=255)
                             aaGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGa                                                                                                       >  2:1127528/1‑140 (MQ=255)
                             aaGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGa                                                                                                       <  2:514598/140‑1 (MQ=255)
                               gCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATg                                                                                                     >  1:861081/1‑140 (MQ=255)
                                  cGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTCCAGACACTATCGTTGTAATTCGACAGCACGTTGATGccc                                                                                                  >  2:714582/1‑140 (MQ=255)
                                   gTGGAACAGCACTTCATCATAGGATGCGCGGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcg                                                                                                 <  1:646159/140‑1 (MQ=255)
                                    tGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgc                                                                                                >  2:262933/1‑140 (MQ=255)
                                    tGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgc                                                                                                >  2:372712/1‑140 (MQ=255)
                                    tGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgc                                                                                                >  2:1176158/1‑140 (MQ=255)
                                    tGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGAACCTTTGCAGCCCCGATAGTTGTCAGTCCAGCGCACGTTGATGCCcgc                                                                                                >  2:750927/1‑140 (MQ=255)
                                     ggAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgct                                                                                               <  2:1504464/140‑1 (MQ=255)
                                     ggAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgct                                                                                               <  2:123277/140‑1 (MQ=255)
                                       aaCAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgctcg                                                                                             <  2:1113549/140‑1 (MQ=255)
                                         cAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgctcgct                                                                                           <  1:1492713/140‑1 (MQ=255)
                                         cAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgctcgct                                                                                           <  2:131889/140‑1 (MQ=255)
                                         cAGCACTTCGTCATAGCATTCGACGTTGATGCACTAATCTGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCcgctcgct                                                                                           <  2:519230/140‑1 (MQ=255)
                                            cACTTCGTCTTAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGAACGTGGATGCCCGCTCGCTGaa                                                                                        >  2:483932/1‑140 (MQ=255)
                                            cACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGaa                                                                                        <  2:205283/140‑1 (MQ=255)
                                                 cGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGata                                                                                   >  2:1471621/1‑140 (MQ=255)
                                                 cGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGata                                                                                   >  2:815511/1‑140 (MQ=255)
                                                 cGTCATAGCATTCGCCGTTGATGCACTGATCGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGatat                                                                                  >  2:1150374/1‑140 (MQ=255)
                                                    cATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCGCGTTGATGCCCGCTCGCTGAATGATATcc                                                                                >  1:519230/1‑140 (MQ=255)
                                                      tAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAg                                                                              >  1:968673/1‑140 (MQ=255)
                                                        gCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCa                                                                            <  2:1333098/140‑1 (MQ=255)
                                                        gCATTCGCCGTTGATGCACTGAGCATGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCa                                                                            <  1:714582/140‑1 (MQ=255)
                                                          aTTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACg                                                                          <  1:1136997/140‑1 (MQ=255)
                                                          aTTCGCCGTTGATGCACTGATCGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGc                                                                         <  1:1150374/140‑1 (MQ=255)
                                                           ttCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGc                                                                         <  2:59067/140‑1 (MQ=255)
                                                           ttCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAACCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGc                                                                         >  1:75832/1‑140 (MQ=255)
                                                           ttCGCCGTGGATGCACTGATCACGTCGATCCAGCGCGTTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGCTGATGCCCGCTCGCTGAATGATATCCAGCACGc                                                                         <  1:457249/140‑1 (MQ=255)
                                                              gCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCtt                                                                      >  2:1037372/1‑140 (MQ=255)
                                                                    gATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGt                                                                >  2:1207609/1‑140 (MQ=255)
                                                                         aCTGATCAGGTAGATTCTGCGCGGTGACGTTATGGTGAGTCACGCGGTTGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCtgt                                                           <  2:674291/140‑1 (MQ=255)
                                                                          cTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCAAGCACGCCTTCCTGGTGCtgtg                                                          >  1:674291/1‑140 (MQ=255)
                                                                           tGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGc                                                         <  1:1444742/140‑1 (MQ=255)
                                                                           tGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGc                                                         <  2:1405920/140‑1 (MQ=255)
                                                                             aTCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCa                                                       >  2:887862/1‑140 (MQ=255)
                                                                             aTCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCa                                                       >  1:125170/1‑140 (MQ=255)
                                                                              tCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAg                                                      <  1:1123990/140‑1 (MQ=255)
                                                                                aGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGct                                                    <  1:1037372/140‑1 (MQ=255)
                                                                                aGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGct                                                    <  1:109263/140‑1 (MQ=255)
                                                                                aGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGct                                                    <  1:1127528/140‑1 (MQ=255)
                                                                                aGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGct                                                    <  1:782328/140‑1 (MQ=255)
                                                                                aGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGct                                                    <  1:1224892/140‑1 (MQ=255)
                                                                                aGGTAGATTCAGCGCGGTGACGTTCTGGTAAGGCACGAGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGct                                                    <  1:474911/140‑1 (MQ=255)
                                                                                aGGTAGATTCAGCGCCGTGACGCTCCGGTAAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGct                                                    <  1:397018/140‑1 (MQ=255)
                                                                                     gATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATTCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCtcttct                                               >  1:1359904/1‑140 (MQ=255)
                                                                                     gATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCtcttct                                               >  1:1062114/1‑140 (MQ=255)
                                                                                       ttCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCTCTGAATGAAATCCAGCTCGCCTTCCTGGTGTTGTGCCAGCTCTTCttt                                             >  2:585685/1‑140 (MQ=255)
                                                                                       ttCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCttt                                             >  1:175208/1‑140 (MQ=255)
                                                                                       ttCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCttt                                             >  2:922075/1‑140 (MQ=255)
                                                                                       ttCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCttt                                             >  2:942678/1‑140 (MQ=255)
                                                                                            cgcgGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGACTGATATCCGGCAAGCCGTCCTGGTGGTGTGGCAGCTCTTCTTTGTAGt                                        >  2:583101/1‑140 (MQ=255)
                                                                                            cgcgGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGGACGCCTTCCTGATGGTGTGCCAGCTCTTCTTTGTAgc                                        >  1:496845/1‑139 (MQ=255)
                                                                                                 tGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCa                                   <  2:1062114/140‑1 (MQ=255)
                                                                                                 tGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCa                                   <  2:861081/140‑1 (MQ=255)
                                                                                                      ttCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCACTTCTTAGTAGTGCTCACGCgg                              >  1:721389/1‑140 (MQ=255)
                                                                                                       tCTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGc                             <  1:128674/140‑1 (MQ=255)
                                                                                                        cTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGTCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCa                            <  1:585685/140‑1 (MQ=255)
                                                                                                        cTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCa                            <  2:40035/140‑1 (MQ=255)
                                                                                                        cTGGTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCa                            <  1:262933/140‑1 (MQ=255)
                                                                                                           gTGAGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGGGCTGTGCAAGCTCTTCTTTGTCGTGCTCACGCGGCatat                         >  2:627677/1‑140 (MQ=255)
                                                                                                              aGGCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCg                      <  1:922075/140‑1 (MQ=255)
                                                                                                                gCACGCGGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCgag                    >  2:1309327/1‑140 (MQ=255)
                                                                                                                   cgcgGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAAc                 >  2:143422/1‑140 (MQ=255)
                                                                                                                   cgcgGTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAAc                 >  2:362017/1‑140 (MQ=255)
                                                                                                                   cgcgGTCGCAAGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAAc                 >  2:1135514/1‑140 (MQ=255)
                                                                                                                      ggTCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATg              <  1:1518375/140‑1 (MQ=255)
                                                                                                                        tCGCAGGCACCTTTGTAGCCGCAATTGTTATCATTCCTCAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCa            <  1:583101/140‑1 (MQ=255)
                                                                                                                        tCGCAGGCACCTTTGCATCCGCTATCGTTGTGATTCCACCGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCa            <  2:571049/140‑1 (MQ=255)
                                                                                                                        tCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCCCAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCa            <  1:595251/140‑1 (MQ=255)
                                                                                                                        tCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCa            <  1:1433319/140‑1 (MQ=255)
                                                                                                                        tCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCa            <  1:1051041/140‑1 (MQ=255)
                                                                                                                        tCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCa            <  2:1540044/140‑1 (MQ=255)
                                                                                                                        tCGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCa            <  2:381413/140‑1 (MQ=255)
                                                                                                                         cGCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCAc           <  1:887862/140‑1 (MQ=255)
                                                                                                                          gCAGGCACCTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCACg          >  1:878899/1‑140 (MQ=255)
                                                                                                                                  cTTTGCAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATACACGGTACTGaa  >  1:4050/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                       
TCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGGTCGCAGGCACCTTTACAGCCGCCATCGTTGTCATTCCACAGCACGTTGATGCCCGCTCGCTGAATGATATCCAGCACGCCTTCCTGGTGCTGTGCCAGCTCTTCTTTGTAGTGCTCACGCGGCATATCCGAGAACATGCACGGTACTGAA  >  NC_000913/4334470‑4334739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: