BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,434,195	A→G	H28R (CAC→CGC)	ytfH →	putative transcriptional regulator YtfH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,434,195	0	A	G	100.0%	426.6 / NA	121	H28R (CAC→CGC)	ytfH	putative transcriptional regulator YtfH
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (57/64); total (57/64)

Only 100 of 125 total aligned reads displayed.

CGCTAACACCTAAACTTACTTTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACACGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCGTTAGAACA  >  NC_000913/4434060‑4434327

     acacCTAAACTTACTTTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAg                                                                                                                             <  1:1094212/140‑1 (MQ=255)

        ccTAAACTTACTTTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCg                                                                                                                          <  1:1128866/140‑1 (MQ=255)

        ccTAAACTTACTTTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCg                                                                                                                          >  2:385374/1‑140 (MQ=255)

           aaaCTTACTTTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTg                                                                                                                       >  1:971365/1‑140 (MQ=255)

           aaaCTTACTTTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTg                                                                                                                       >  2:285371/1‑140 (MQ=255)

             acttacttTTAGTAATTACGTAGAATAAGATAAGTATCAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTggg                                                                                                                     <  1:482582/140‑1 (MQ=255)

             acttacttTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTggg                                                                                                                     <  1:285371/140‑1 (MQ=255)

             acttacttTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTggg                                                                                                                     <  1:1361985/140‑1 (MQ=255)

             acttacttTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTggg                                                                                                                     <  1:259376/140‑1 (MQ=255)

              cttacttTTAGTAAGTATGTACCAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTgggg                                                                                                                    <  2:473956/140‑1 (MQ=255)

                 acttTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCGGCCGTTGGGGGgt                                                                                                                 >  2:532086/1‑140 (MQ=255)

                 acttTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGAGAGGTGTTGAAAAGCGTAACCAGCCGTTGGGGGgt                                                                                                                 >  2:516222/1‑140 (MQ=255)

                  acagtAGTAAGTACGTACAAAACGGCAAGTATGAAATTAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGgtg                                                                                                                <  1:730321/136‑1 (MQ=255)

                      tAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGa                                                                                                            <  1:1031134/140‑1 (MQ=255)

                        gtaagtaCGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGAtt                                                                                                          >  1:323880/1‑140 (MQ=255)

                           agtaCGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGTCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCtg                                                                                                       >  2:1399465/1‑140 (MQ=255)

                           agtaCGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTgg                                                                                                                      <  2:1261604/125‑1 (MQ=255)

                           agtaCGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTgg                                                                                                                      >  1:1261604/1‑125 (MQ=255)

                             tacgtacAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTATTGAAACGCGTAACCAGCGGTTGGGTGGTGTTGATTCtggt                                                                                                     >  1:404291/1‑140 (MQ=255)

                             tacgtacAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCCCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCtggt                                                                                                     >  2:905221/1‑140 (MQ=255)

                                 tacAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGTCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGgcg                                                                                                 <  1:1399465/140‑1 (MQ=255)

                                 tacAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGgcg                                                                                                 >  2:203258/1‑140 (MQ=255)

                                    aaaaaGGTAAGTATGACATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTa                                                                                              <  2:936356/140‑1 (MQ=255)

                                    aaaaaGGTAAGTATGAATAGAGTCAGGTTAGCCTGCCGCAACAACTGATAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGGGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTa                                                                                              <  2:429748/140‑1 (MQ=255)

                                      aaaGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTAcg                                                                                            <  1:385374/140‑1 (MQ=255)

                                      aaaGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCATCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTAcg                                                                                            <  2:1325934/140‑1 (MQ=255)

                                       aaGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTAcgc                                                                                           >  2:758959/1‑140 (MQ=255)

                                       aaGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTAcgc                                                                                           >  2:1419025/1‑140 (MQ=255)

                                       aaGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTAcgc                                                                                           >  1:99902/1‑140 (MQ=255)

                                         ggTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGa                                                                                         <  2:156885/140‑1 (MQ=255)

                                         ggTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGa                                                                                         <  2:83832/140‑1 (MQ=255)

                                         ggTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGa                                                                                         >  1:156885/1‑140 (MQ=255)

                                           tAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAg                                                                                       >  1:336124/1‑140 (MQ=255)

                                              gTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTa                                                                                    >  1:1462978/1‑140 (MQ=255)

                                                  gAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAg                                                                                       <  2:894550/133‑1 (MQ=255)

                                                   aaaTGAGTCAGGTTAGCCTGTCGCAACAAGTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCAt                                                                               <  1:551540/140‑1 (MQ=255)

                                                   aaaTGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCAt                                                                               <  1:874052/140‑1 (MQ=255)

                                                    aaTGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATc                                                                              >  1:912730/1‑140 (MQ=255)

                                                       gAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCt                                                                           <  1:758959/140‑1 (MQ=255)

                                                        aGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGATGATTCTAGTGCCGCTACGCGGAGGTACTCATCGCtt                                                                          >  1:511085/1‑140 (MQ=255)

                                                         gTCAGGTTAGCCTGTCGCAACAACTGTAAGAGGGTAATCTCTTTGCGGAACAGTGCCCTTCGGGCGAGGTGTTGAAACGCGTCATCAGTCGATGGGGGGTCTTGGTTCCGTTGGCGCGACGCAAAGGTACTCATCGCttt                                                                         >  2:496535/1‑140 (MQ=255)

                                                         gTCAGGTTAGCCTGTCGCAACAACTGAAAGCGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGCTTCAGGTGGCGCTACGCAAAGGTACTCATCGCttt                                                                         >  2:493885/1‑140 (MQ=255)

                                                         gTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGGGCGACGCGAAGGTACTCATCGCttt                                                                         >  1:496240/1‑140 (MQ=255)

                                                         gTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCttt                                                                         >  2:36706/1‑140 (MQ=255)

                                                         gTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCttt                                                                         >  1:263331/1‑140 (MQ=255)

                                                         gTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTC‑TTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTa                                                                        >  1:809360/1‑140 (MQ=255)

                                                                  gCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCGGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTg                                                                <  1:532086/140‑1 (MQ=255)

                                                                  gCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGTGACCTg                                                                >  1:841796/1‑140 (MQ=255)

                                                                  gCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTg                                                                <  2:1127420/140‑1 (MQ=255)

                                                                   ccTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTgc                                                               >  2:158429/1‑140 (MQ=255)

                                                                       tCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTgcggcg                                                           >  2:822330/1‑140 (MQ=255)

                                                                       tCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGACTCTGGTGGGGCTACGCCAAGGTACTGATCGCTTTAGCGACCTgcggcg                                                           >  2:605904/1‑140 (MQ=255)

                                                                       tCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGAATCTGGTGGCGCTTCGCCAAGGTACTCATCGCTTTAGCGACCTgcggcg                                                           >  2:640104/1‑140 (MQ=255)

                                                                        cGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGgcgc                                                          >  2:342664/1‑140 (MQ=255)

                                                                        cGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGgcgc                                                          >  2:1018599/1‑140 (MQ=255)

                                                                        cGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGgcgc                                                          <  2:251204/140‑1 (MQ=255)

                                                                        cGCAACAACTGAAAGAGGGAAATCTCTTTGTGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAAGTAATCATCGCTTTAGCGACCTGCGgcgc                                                          >  1:512814/1‑140 (MQ=255)

                                                                          caacaaCTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCaa                                                        <  2:237793/140‑1 (MQ=255)

                                                                          caacaaCTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCaa                                                        <  1:203258/140‑1 (MQ=255)

                                                                          caacaaCTGAAAGAGGGTAATCCCTTTGCGGCACACTGCCCGTCGCGCTAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCaa                                                        <  2:465064/140‑1 (MQ=255)

                                                                             caacTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAAt                                                     >  2:931025/1‑140 (MQ=255)

                                                                                cTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCgg                                                  <  2:323880/140‑1 (MQ=255)

                                                                                 tGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGTGACCTGCGGCGCAAAATCGGt                                                 <  2:841796/140‑1 (MQ=255)

                                                                                    aaGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTggg                                              <  1:36706/140‑1 (MQ=255)

                                                                                    aaGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTggg                                              <  2:1462978/140‑1 (MQ=255)

                                                                                    aaGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTggg                                              <  2:324539/140‑1 (MQ=255)

                                                                                      gagGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGgt                                            <  1:822330/140‑1 (MQ=255)

                                                                                      gagGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGgt                                            <  2:1098664/140‑1 (MQ=255)

                                                                                         ggTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGGGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTATCGACCTGCGGCGCAAAATCGGTGGGgtgag                                         >  1:877519/1‑140 (MQ=255)

                                                                                         ggTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGCGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATAGCTTTAGGGACGTGAGGCGCAGAATCGGTGGGgtgag                                         >  1:421389/1‑140 (MQ=255)

                                                                                          gTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGgtgagt                                        <  1:931025/140‑1 (MQ=255)

                                                                                          gTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGgtgagt                                        >  2:360862/1‑140 (MQ=255)

                                                                                          gTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGgtgagt                                        >  2:1135233/1‑140 (MQ=255)

                                                                                           tAATCTCTTTGCGGAACAGTGCCTGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGgtgagtg                                       >  1:145967/1‑140 (MQ=255)

                                                                                           tAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTgggg                                             <  1:1458227/134‑1 (MQ=255)

                                                                                           tAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTgggg                                             >  2:1458227/1‑134 (MQ=255)

                                                                                                 ctTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGa                                 >  1:849692/1‑140 (MQ=255)

                                                                                                  tttGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCGAAATCGGTGGGGTGAGTGAAAAGAt                                >  1:441603/1‑140 (MQ=255)

                                                                                                  tttGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGAt                                >  1:1072016/1‑140 (MQ=255)

                                                                                                   ttGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGCGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATg                               >  1:1239812/1‑140 (MQ=255)

                                                                                                    tGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGc                              <  2:912730/140‑1 (MQ=255)

                                                                                                        gAACAGTGCCCGTCGCGCGAGGCGTTGAAGCGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTgc                          <  1:628856/140‑1 (MQ=255)

                                                                                                         aaCAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTgcg                         <  2:849692/140‑1 (MQ=255)

                                                                                                         aaCAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTgcg                         <  1:1018599/140‑1 (MQ=255)

                                                                                                         aaCAGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTgcg                         <  2:263331/140‑1 (MQ=255)

                                                                                                            aGTGCCCGTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAg                      >  1:627814/1‑140 (MQ=255)

                                                                                                                   gTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTAc               >  2:1273257/1‑140 (MQ=255)

                                                                                                                   gTCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCACAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTAc               >  2:1517152/1‑140 (MQ=255)

                                                                                                                    tCGCGCGAGGTGTTGAGGCGCGCCACCAGCCGTCGTGGGATGTTGATTATGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACa              <  2:681797/140‑1 (MQ=255)

                                                                                                                    tCGCGCGAGGTGTTGAAACGCGTCACTAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACa              <  2:34052/140‑1 (MQ=255)

                                                                                                                    tCGCGCGAGGTGTTGAAACGCGTCACCAGCCTTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACa              <  2:688433/140‑1 (MQ=255)

                                                                                                                    tCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACa              <  2:75807/140‑1 (MQ=255)

                                                                                                                    tCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACa              <  1:350058/140‑1 (MQ=255)

                                                                                                                    tCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACa              <  1:360862/140‑1 (MQ=255)

                                                                                                                    tCGCGCGAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAATCGTTACa              <  2:1239812/140‑1 (MQ=255)

                                                                                                                     cgcgcgAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACa              >  1:205791/1‑139 (MQ=255)

                                                                                                                        gcgAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCg          >  1:244424/1‑140 (MQ=255)

                                                                                                                         cgAGGTGTTGAAACGCGTCACCAGCCGTTGGGGGGCGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCGt         <  2:627814/140‑1 (MQ=255)

                                                                                                                         cgAGGTGTTGAAACGCGGCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCGt         <  2:809360/140‑1 (MQ=255)

                                                                                                                                ttGAAACGCGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCGTTAGAACa  <  2:374858/140‑1 (MQ=255)

CGCTAACACCTAAACTTACTTTTAGTAAGTACGTACAAAAAGGTAAGTATGAAATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACACGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCGTTAGAACA  >  NC_000913/4434060‑4434327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`