Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	607,626	T→C	intergenic (‑243/‑108)	ybdK ← / → sokE	carboxylate‑amine ligase/small RNA SokE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	607,626	0	T	C	100.0%	267.6 / NA	76	intergenic (‑243/‑108)	ybdK/sokE	carboxylate‑amine ligase/small RNA SokE
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (20/56);  total (20/56)

GGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTAT  >  NC_000913/607490‑607761                                                                                                                                         |                                                                                                                                        ggTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCg                                                                                                                                      >  2:827501/1‑140 (MQ=255) ggTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCg                                                                                                                                      <  2:351485/140‑1 (MQ=255)  gTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGa                                                                                                                                     >  2:937276/1‑140 (MQ=255)  gTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGa                                                                                                                                     >  1:323293/1‑140 (MQ=255)   tGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGaa                                                                                                                                    <  2:311934/140‑1 (MQ=255)   tGCCTGAAGCAATTTCGCTACTCTTCCAATGTGACAACTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGaa                                                                                                                                    <  1:413875/140‑1 (MQ=255)    gCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAGAAACGGGTCCAGATTCCGTTGATTAAATGAGGAGTGAGAAGCCCGaaa                                                                                                                                   >  2:612288/1‑140 (MQ=255)    gCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGaaa                                                                                                                                   <  2:931237/140‑1 (MQ=255)      cTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACa                                                                                                                                 >  2:168068/1‑140 (MQ=255)       tGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCg                                                                                                                                      >  2:909179/1‑134 (MQ=255)       tGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCg                                                                                                                                      <  1:909179/134‑1 (MQ=255)       tGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGaa                                                                                                                                    >  2:1089141/1‑136 (MQ=255)       tGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGaa                                                                                                                                    <  1:1089141/136‑1 (MQ=255)        gAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAgg                                                                                                                               <  2:321134/140‑1 (MQ=255)         aaGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCTGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGa                                                                                                                              >  1:982969/1‑140 (MQ=255)         aaGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGa                                                                                                                              >  2:1280197/1‑140 (MQ=255)           gCAATTTGGCTACTTTTGCAATTTGACAATTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACt                                                                                                                            <  1:617581/140‑1 (MQ=255)           gCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACt                                                                                                                            <  1:937276/140‑1 (MQ=255)           gCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACt                                                                                                                            <  1:242092/140‑1 (MQ=255)           gCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACt                                                                                                                            <  1:1246006/140‑1 (MQ=255)           gCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACt                                                                                                                            <  2:770235/140‑1 (MQ=255)           gCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACt                                                                                                                            <  2:1422137/140‑1 (MQ=255)           gCAATTTGGCTACTTTTGCAATCTGACAATTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACt                                                                                                                            <  1:612288/140‑1 (MQ=255)           gCAATTTGGCTACTTTACCAATATGACAAGGGACGGCAGAGCTGACTGTTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACt                                                                                                                            <  2:728314/140‑1 (MQ=255)           gCAATTTGGCTACTTCTGGAATTTGGCAATTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAACCCGAAACAGGACt                                                                                                                            <  1:542948/140‑1 (MQ=255)            cAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTc                                                                                                                           <  1:1505547/140‑1 (MQ=255)             aaTTTGGCTACTTTTGCAGTGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCa                                                                                                                          <  2:262304/140‑1 (MQ=255)             aaTTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCa                                                                                                                          <  2:156042/140‑1 (MQ=255)             aaTTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCa                                                                                                                          <  2:204059/140‑1 (MQ=255)             aaTTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCa                                                                                                                          <  2:1405335/140‑1 (MQ=255)             aaTTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCa                                                                                                                          <  2:323293/140‑1 (MQ=255)             aaTTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCa                                                                                                                          <  1:1474639/140‑1 (MQ=255)             aaTTTGGCTACTTTTCCAATGTGACCAGTCATGGCAGCGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCa                                                                                                                          <  1:494620/140‑1 (MQ=255)             aaTTTGGCTACTTTTCCAATGTCACCAGTCATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCa                                                                                                                          <  1:415475/140‑1 (MQ=255)              aTTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGTGAAGCCCGAAACAGGACTCAc                                                                                                                         <  1:1273936/140‑1 (MQ=255)               tttGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACt                                                                                                                        <  1:1280197/140‑1 (MQ=255)                ttGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTg                                                                                                                       <  1:863932/140‑1 (MQ=255)                    cTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGtata                                                                                                                   >  1:1548240/1‑140 (MQ=255)                                 gtgACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGACGCCCGAAACAGGACTCACTGTATAAATAAACAGCTAt                                                                                                      >  1:700545/1‑140 (MQ=255)                                 gtgACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAg                                                                                                          <  1:1232910/136‑1 (MQ=255)                                 gtgACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAg                                                                                                          >  2:1232910/1‑136 (MQ=255)                                   gACAAGTTATGGCAGTGCTGACGGGTGGCGAAGAACTTTGACGATTGATTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTAttt                                                                                                    <  2:603700/140‑1 (MQ=255)                                     cAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTttg                                                                                                  <  1:926637/140‑1 (MQ=255)                                      aaGTTATGGCAGTGCTGACTGGAGGCGAAGAGTTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTttgt                                                                                                 <  2:624815/140‑1 (MQ=255)                                       aGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTttgtt                                                                                                <  1:328075/140‑1 (MQ=255)                                           aTGGCAGTGCTGACTGGTGGCGCAGTATTCTGACGATCGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                                                                            <  1:467540/140‑1 (MQ=255)                                           aTGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                                                                            <  1:1259279/140‑1 (MQ=255)                                           aTGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                                                                            <  1:168068/140‑1 (MQ=255)                                           aTGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                                                                            <  1:867034/140‑1 (MQ=255)                                           aTGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                                                                            <  2:810935/140‑1 (MQ=255)                                           aTGGCAGTGCTGACTGGTGACGAAGAATTTTTACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGGTTAAATGAGGAGTGAGAAGTCCGAAACAGGACGCACTGTATAAATAAACAGCTATTTTGTTGAgg                                                                                            <  2:767767/140‑1 (MQ=255)                                            tGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGa                                                                                           <  1:1219229/140‑1 (MQ=255)                                                  tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                                                                            <  2:933156/133‑1 (MQ=255)                                                  tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                                                                            >  1:933156/1‑133 (MQ=255)                                                  tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTa                                                                                     >  1:1353627/1‑140 (MQ=255)                                                  tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTa                                                                                     >  2:875858/1‑140 (MQ=255)                                                  tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTa                                                                                     >  2:1005191/1‑140 (MQ=255)                                                   gCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTaa                                                                                    >  1:1291319/1‑140 (MQ=255)                                                    cTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAg                                                                                   >  1:271646/1‑140 (MQ=255)                                                       aCTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTttgtt                                                                                                >  2:632149/1‑124 (MQ=255)                                                       aCTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTttgtt                                                                                                <  1:632149/124‑1 (MQ=255)                                                            tggCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGa                                                                                           >  2:1496733/1‑124 (MQ=255)                                                            tggCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGa                                                                                           <  1:1496733/124‑1 (MQ=255)                                                             ggCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAAcggcg                                                                          <  1:1005191/140‑1 (MQ=255)                                                              gCGAAGAAGTTTGACGATTGAGGCATGCAGAGATATACGTGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAAcggcgg                                                                         <  2:700545/140‑1 (MQ=255)                                                                        ttGACGACTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAg                                                               <  1:827501/140‑1 (MQ=255)                                                                            cGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCttt                                                           <  1:190579/140‑1 (MQ=255)                                                                            cGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCttt                                                           <  1:1063883/140‑1 (MQ=255)                                                                                 taatCATGGAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGt                                                      <  2:1083419/137‑1 (MQ=255)                                                                                   gTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGttt                                                    <  2:1353627/140‑1 (MQ=255)                                                                                      aTGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTTCAg                                                 <  2:1548240/140‑1 (MQ=255)                                                                                                        tCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTTCAGGTTTACTCTGAGGTCTgg                               <  1:51008/140‑1 (MQ=255)                                                                                                                aGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTTCAGGTTTACTCTGAGGTCTGGAAAGATGa                       <  2:1224565/140‑1 (MQ=255)                                                                                                                     aTTAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCATGAAGCTTTCCGGTTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGccc                  <  2:1291319/140‑1 (MQ=255)                                                                                                                      ttAAATGAGGAGTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGcccc                 <  1:246541/140‑1 (MQ=255)                                                                                                                               gagTGAGAAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGatat        <  2:271646/140‑1 (MQ=255)                                                                                                                                     gaAGCCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTAt  <  1:5162/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        GGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTAT  >  NC_000913/607490‑607761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑